mRNA_L-elsbetiae_contig863.17668.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
|
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: D8LEB8_ECTSI (Putative decarboxylase family protein, lysine decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB8_ECTSI) HSP 1 Score: 303 bits (775), Expect = 2.740e-101 Identity = 144/197 (73.10%), Postives = 165/197 (83.76%), Query Frame = 3
Query: 3 QTGCMGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIKDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEWCVSQLNSPEKNPVRPRRRSMSRDGNEKP----WRTSDRLVWAGSVVVGSCALSLVLGLLRR 581
+ GCMGALN+GV ERCGRVRGVIHEMWIVD SEHP++KDLRVVGG+GLQERKR+LMEGADCI+ALPGG+GTWDELWEMVCLKGIGLC+VPICVLDV+DFYAGFK+QTKRAQADRLLYAD +KLLHFESDPAKA+EWCVSQL +P ++ RR + G P W SDR +WA SV+ S AL+L + LRR
Sbjct: 49 RAGCMGALNDGVTERCGRVRGVIHEMWIVDASEHPQVKDLRVVGGQGLQERKRMLMEGADCIVALPGGLGTWDELWEMVCLKGIGLCDVPICVLDVEDFYAGFKVQTKRAQADRLLYADMDKLLHFESDPAKAIEWCVSQLGAPGRDHKPNRRLERTTSGVNPPTTTSWSNSDRFMWACSVIACSGALTLAMTALRR 245
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: A0A836CF56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF56_9STRA) HSP 1 Score: 179 bits (454), Expect = 3.800e-53 Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = 3
Query: 9 GCMGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIKDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEWCVSQLNS 431
GCMGALN+GV + GRVRGVIH W+VD++EHP I DL VV G+ LQERK+ L+ G D IIALPGG GTWDE+WEM C +GIG VPI ++ D FY GF Q +RA D LLY + L+HFE D A+ WCV +NS
Sbjct: 46 GCMGALNDGVQQANGRVRGVIHAKWVVDQAEHPNIMDLIVVEGDDLQERKKALVHGVDVIIALPGGPGTWDEMWEMACQRGIGFSGVPIVAVNTDGFYDGFVQQLQRADKDGLLYLPPKDLVHFEPDAESALRWCVEHINS 186
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: L1K3Y6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3Y6_GUITC) HSP 1 Score: 144 bits (363), Expect = 1.210e-39 Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 3
Query: 3 QTGCMGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIKDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEW 410
+TGCMGALN+G + G GVIHEM++VD EH + + V G+ L ERK++L+EGADC+IALPGG+GTWDELWE+V +G N+PI V++ + FY FK +A D+L+Y E L+ FES A+ +
Sbjct: 41 KTGCMGALNDGCIHAGGTTIGVIHEMFVVDGEEHTGLTQMIVARGDCLAERKKLLVEGADCVIALPGGVGTWDELWEVVAEVSLGFKNIPIVVINTNGFYDSFKAMLAKAMEDKLIYKGPETLVRFESSVVAALNF 176
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: A0A7S4K7G2_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K7G2_GUITH) HSP 1 Score: 144 bits (363), Expect = 6.450e-39 Identity = 66/136 (48.53%), Postives = 91/136 (66.91%), Query Frame = 3
Query: 3 QTGCMGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIKDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEW 410
+TGCMGALN+G + G GVIHEM++VD EH + + V G+ L ERK++L+EGADC+IALPGG+GTWDELWE+V +G N+PI V++ + FY FK +A D+L+Y E L+ FES A+ +
Sbjct: 56 KTGCMGALNDGCIHAGGTTIGVIHEMFVVDGEEHTGLTQMIVARGDCLAERKKLLVEGADCVIALPGGVGTWDELWEVVAEVSLGFKNIPIVVINTNGFYDSFKAMLAKAMEDKLIYKGPETLVRFESSVVAALNF 191
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: A0A7S3MFJ3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFJ3_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.360e-38 Identity = 68/150 (45.33%), Postives = 99/150 (66.00%), Query Frame = 3
Query: 9 GCMGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIKDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNV---PICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEWCVSQLNSPEKNPV 449
G MGALN ++ G++ GVIH ++ VD EHP IKDL VVGG L ERK L + +DCI+ LPGG+GT+DELW+ + K +G+ ++ PIC+++VD FY G Q +RA D +LY + E+ +H E++ A A+ WC Q+ + K P+
Sbjct: 43 GVMGALNTACSQKNGKIVGVIHSIFCVDAGEHPFIKDLLVVGGIDLYERKLQLFDASDCILVLPGGVGTFDELWDGISSKSLGMKDMSLKPICIVNVDGFYDGSLQQLQRAHEDGILYQEVEEYVHVETNVADALAWCAEQVENSRKVPI 192
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: K8Z7U8_NANGC (Lysine decarboxylase-like protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7U8_NANGC) HSP 1 Score: 141 bits (355), Expect = 9.080e-38 Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 3
Query: 3 QTGCMGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIKDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEWCVSQLNS 431
+ GCMGALN G G+++ VIH W++DK E ++ +L + G LQERKR+L E DC+I LPGG GTWDEL E+ C +G +PI +++VD FY G Q RA D++LYA + +H E+ A+ WC ++ +
Sbjct: 41 KNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQA 183
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: B8C494_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C494_THAPS) HSP 1 Score: 139 bits (351), Expect = 1.080e-36 Identity = 69/153 (45.10%), Postives = 94/153 (61.44%), Query Frame = 3
Query: 9 GCMGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIK-----------DLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEWCVSQLNSP 434
GCM A+N G + GR+ GVIHEM+IVD S+ E +L V G+ LQERKR+L++GAD ++ LPGG GTWDELWEM C + +G N+PI ++VD +Y F +RA +D LLY + + ++HFE P AV+W L P
Sbjct: 50 GCMAAMNQGASDGNGRIVGVIHEMFIVDGSDWLEGSQHTFANNGGKHELLVAKGDDLQERKRLLVKGADGLVVLPGGPGTWDELWEMACARHVGFHNMPIVCVNVDGYYDTFMSILQRAHSDELLYKEPQDIVHFEETPEAAVKWIEDYLADP 202
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: A0A482RTM3_9ARCH (TIGR00730 family Rossman fold protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTM3_9ARCH) HSP 1 Score: 139 bits (350), Expect = 1.090e-36 Identity = 62/143 (43.36%), Postives = 92/143 (64.34%), Query Frame = 3
Query: 9 GCMGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIKDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGI---GLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEWCVSQLN 428
G MG +N G + GR++GVIH+ ++VD E +KDL V G L ERK +L ADC+I +PGG+GT+DE W+ VC + + GL P C++++D FY GF QTKRA+ D ++Y + ++ H S A++WCVS+L+
Sbjct: 56 GVMGGVNEGCLSSSGRIKGVIHKTFLVDNGEDSRLKDLVVTEGNDLSERKNMLFANADCVICMPGGVGTFDEFWDGVCARSLNMKGLGATPFCLVNIDGFYDGFIQQTKRAKQDGMMYLELDEYYHVSSTIEDALDWCVSKLS 198
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: A0A7S2ENU1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENU1_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.050e-34 Identity = 68/158 (43.04%), Postives = 93/158 (58.86%), Query Frame = 3
Query: 6 TGCMGALNNGVVERCGRVRGVIHEMWIVDKSE------HPEI-----------------KDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEW 410
+GCMGALN G E G++ GVIHEM+IVD S+ H + + V GGE LQERK++L++GAD ++ LPGG GTWDELWEM C + +G N+PI ++ + +Y GF+ +R D LLY E ++HFE KA+EW
Sbjct: 111 SGCMGALNKGCDEGNGKIVGVIHEMFIVDGSDWCTSGAHSVFHTSEMIKGGEEEQSGMKRQILVAGGEDLQERKKLLVKGADALMVLPGGPGTWDELWEMACARNLGFNNIPIVCINTNGYYNGFQQMLQRGHDDSLLYNKPEDIVHFEDSAEKALEW 268
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Match: A0A7S1FYM5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYM5_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.080e-34 Identity = 65/142 (45.77%), Postives = 88/142 (61.97%), Query Frame = 3
Query: 15 MGALNNGVVERCGRVRGVIHEMWIVDKSEHPE----------IKDLRVVGGEGLQERKRVLMEGADCIIALPGGMGTWDELWEMVCLKGIGLCNVPICVLDVDDFYAGFKIQTKRAQADRLLYADAEKLLHFESDPAKAVEW 410
M + +G + G+V GVIHEM++VD+++ E + +L V GG LQERK+ L+ GAD I+ +PGG GTWDELWEM C K IGL ++PI ++V FY F+ +RAQ D LLY E L+HFE+ AV W
Sbjct: 1 MSGMTDGAIAAGGKVVGVIHEMFLVDRADFAEDGPHASLCSPLYELVVAGGNDLQERKKKLVGGADAIVVMPGGPGTWDELWEMACSKNIGLLDIPIVCVNVKGFYDDFEKMLRRAQDDGLLYRKPEDLVHFENTSEGAVRW 142 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig863.17668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig863.17668.1 >prot_L-elsbetiae_contig863.17668.1 ID=prot_L-elsbetiae_contig863.17668.1|Name=mRNA_L-elsbetiae_contig863.17668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp MGALNNGVVERCGRVRGVIHEMWIVDKSEHPEIKDLRVVGGEGLQERKRVback to top mRNA from alignment at L-elsbetiae_contig863:27797..31436- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig863.17668.1 ID=mRNA_L-elsbetiae_contig863.17668.1|Name=mRNA_L-elsbetiae_contig863.17668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3640bp|location=Sequence derived from alignment at L-elsbetiae_contig863:27797..31436- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig863:27797..31436- >mRNA_L-elsbetiae_contig863.17668.1 ID=mRNA_L-elsbetiae_contig863.17668.1|Name=mRNA_L-elsbetiae_contig863.17668.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1140bp|location=Sequence derived from alignment at L-elsbetiae_contig863:27797..31436- (Laminarionema elsbetiae ELsaHSoW15)back to top |