prot_L-elsbetiae_contig860.17639.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig860.17639.1
Unique Nameprot_L-elsbetiae_contig860.17639.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length149
Homology
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: D8LSR0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSR0_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 7.210e-71
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0
Query:    1 MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNADARDSRLLATEAPFGPLVLQEAANEVVFEE 119
            MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTG+IKGQ QM VGDETAHA+RDSAPISILRPFDRGYITNWEPEFEVWRRML RNFLNAD RDSRLLATEAPFGPLVLQEAANEV+ EE
Sbjct:    1 MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISILRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEVLEEE 119          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: A0A836CBT8_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT8_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.460e-48
Identity = 81/138 (58.70%), Postives = 95/138 (68.84%), Query Frame = 0
Query:    4 TLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNA-DARDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQV 140
            T+V DNGAG ++ G AG+  P HTMPNCT KIK QT +  GDET  A RD + +   RP DRGY+ NWE E EVW+RM   + LN  + +D  LL TE PF P++L E ANEVVFEE GF ACYRCP AALS Y EQV
Sbjct:    3 TVVIDNGAGSVRGGWAGEPNPRHTMPNCTAKIKNQTVVLAGDETVDAVRDKSQLVYQRPHDRGYLINWENELEVWKRMFDASHLNVQNPQDHALLFTEPPFAPIMLAETANEVVFEELGFTACYRCPPAALSVYLEQV 140          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: W7TWI5_9STRA (Actin-related protein 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI5_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.120e-32
Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 0
Query:    4 TLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNADARDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERE 146
            TLV DNGA  +K G AG   P   +PNC  K+KGQ Q  +G++    + ++A +   RPFDRGY+T+WE E ++W R    N    D   + L+ TEAPF P  L   + +VVFEEFGFAAC + P+A+ S Y   ++E++++
Sbjct:   37 TLVLDNGADRMKMGFAGDPAPRFYIPNCMAKLKGQLQWLIGEDMDSVN-NTANLQYTRPFDRGYLTDWEAEHQIWGRAFGANKAKVDPAQTHLVLTEAPFTPSPLATFSTQVVFEEFGFAACAKMPAASFSGYRYSLMEKQQQ 178          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: UPI000359A9A6 (actin-related protein 6 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359A9A6)

HSP 1 Score: 107 bits (266), Expect = 1.230e-24
Identity = 59/146 (40.41%), Postives = 85/146 (58.22%), Query Frame = 0
Query:    4 TLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKG-QTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNADARDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESM 148
            TL+ DNGAG  KAG +    P   +PNC  K K  +T++ +GD+     +D + +  L PF RG++ NWE E +VW R+ S++ L  D  ++RL+ TE  F    + EA NEV+FEEF F A +R  +  L+CY  Q  +E   SM
Sbjct:    3 TLIVDNGAGTAKAGFSTDPEP-RIIPNCVTKAKNVRTRIFIGDQIDEC-KDLSSLYYLLPFQRGFLVNWEIEKQVWDRLFSKDVLQVDFNETRLILTEPFFNFPSIGEAINEVIFEEFQFHALHRTQAPTLTCYKHQKDKETSGSM 146          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: A0A0D2JW31_9CHLO (Actin-like protein arp-6 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JW31_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 2.520e-24
Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 0
Query:    3 KTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNA----------DARDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALS 134
            + LV DNGAG +K G AG+ +P    PNCT K KG+ Q+ VGD    A +D   +++ RPFDRGY+  W+ E E+W++      L+A          D   + LL TE  F    +Q A  E+VFE+FGF   +  P+   S
Sbjct:    7 RVLVMDNGAGNIKLGWAGEEKPRIVFPNCTAKPKGERQVYVGDALLDA-KDIMSLNMRRPFDRGYMVQWDLEKEIWQKAFKSAALSAKGPGNASGAWDPASTALLVTEPIFNFPAVQAATEEMVFEQFGFKCFFTAPAPWFS 147          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: A0A7S0UQK4_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UQK4_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 7.670e-24
Identity = 57/136 (41.91%), Postives = 74/136 (54.41%), Query Frame = 0
Query:    2 SKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNADA---RDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALS 134
            +  L  DNG G LK G AG   P  T PNC  K KG+ Q A GD   +A ++ + +S+ RPFDRGY+ NWE E ++W R L    L +     +D  L  TE  F    +Q A  +VVFEEFGF + Y  P+   S
Sbjct:    7 TNVLAIDNGGGSLKLGIAGCDAPLRTFPNCLAKPKGERQAAAGD-ALNALQEISQLSVKRPFDRGYLVNWELERDIWSRCLRTESLQSSQIQIQDCGLALTEPFFNFPQIQAATEQVVFEEFGFQSLYAAPAPVFS 141          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: A0A2V0P1J1_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P1J1_9CHLO)

HSP 1 Score: 102 bits (255), Expect = 8.400e-23
Identity = 55/137 (40.15%), Postives = 76/137 (55.47%), Query Frame = 0
Query:    3 KTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNA-----DARDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALS 134
            + LV DNGAG +K G AG+ +P    PNCT K KG+ Q+ VGD    A +D   +++ RPFDRGY+  W+ E E+W R      L+      D   + LL TE  F    +Q A  E+VFE+FGF + +  P+   S
Sbjct:    8 RVLVMDNGAGNIKLGWAGEDKPRMVFPNCTAKPKGERQVYVGDALLDA-KDIMSLNMRRPFDRGYMVQWDVEKEIWARAFKSAKLSEGRGRWDPASAGLLLTEPIFNFPAVQAATEEMVFEQFGFRSLFTAPAPWFS 143          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: A0A8J9SLF1_9CHLO (Actin-related protein 6 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SLF1_9CHLO)

HSP 1 Score: 102 bits (253), Expect = 1.040e-22
Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 0
Query:    5 LVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNADARDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALS 134
            +V DNG    K G AGQ  P    PN  G+ KG+ Q  VGD+   + RD++ + + RPFDRGY+ NW+ E  VW R   ++ L    +D  LL TE PF    +Q +  ++VFEE+GF++    P+  LS
Sbjct:    7 IVLDNGGSSCKIGLAGQSEPYRVFPNAIGRAKGERQSFVGDQLL-SYRDASSLVLRRPFDRGYLVNWDVEKAVWWRAF-KSLLQVQPQDCSLLMTEPPFNLPSIQSSTLQMVFEEYGFSSFASLPAQPLS 134          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: A0A0L0HA08_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HA08_SPIPD)

HSP 1 Score: 101 bits (252), Expect = 1.160e-22
Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 0
Query:    4 TLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNADARDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESM 148
            TLV DNGA  +K G A +        NC  K KG  +  +GD+     RD + + I  PF++GY+TNWE +  +W R+ S + L+ +A ++ LL TE  F   ++Q   +E++FEEFGFAA +R  +A L C +     E  E M
Sbjct:    5 TLVVDNGAYTIKCGFAERPETLRLSRNCVAKAKGDRRTFIGDQLGDC-RDYSGLFIRVPFEKGYLTNWEIQKTIWERLFSSDVLDVNASETNLLLTEPCFNLPIIQRNYDEIIFEEFGFAAYHRTAAANL-CKYTLTTNEVAECM 147          
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Match: A0A4P9WMZ5_9FUNG (Actin family (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WMZ5_9FUNG)

HSP 1 Score: 100 bits (248), Expect = 1.250e-22
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 0
Query:    1 MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHASRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNADARDSRLLATEAPFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEE 143
            M++TLV DNGA  +KAG A       T+PN     +G  +  VGD+     +D + +    PF+RGY+TNW+ E +VW R+ S+  L     +  L+ TE  F P  +Q+  +E+VFEE+GF A +R  +  L C +  V EE
Sbjct:    2 MTRTLVMDNGAHAIKAGYADDSESGRTIPNSITAGRGDRRSFVGDQLEDC-KDYSGLYFRLPFERGYLTNWDVEKDVWDRVFSKQVLKCVPSEVSLMITEPCFNPPNIQQTYDEMVFEEYGFEAYHRSIAPKL-CQYANVSEE 142          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig860.17639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSR0_ECTSI7.210e-7193.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBT8_9STRA3.460e-4858.70Actin family n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TWI5_9STRA1.120e-3242.66Actin-related protein 6 n=2 Tax=Monodopsidaceae Ta... [more]
UPI000359A9A61.230e-2440.41actin-related protein 6 n=1 Tax=Aplysia californic... [more]
A0A0D2JW31_9CHLO2.520e-2438.73Actin-like protein arp-6 n=1 Tax=Monoraphidium neg... [more]
A0A7S0UQK4_9CHLO7.670e-2441.91Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]
A0A2V0P1J1_9CHLO8.400e-2340.15Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A8J9SLF1_9CHLO1.040e-2240.00Actin-related protein 6 n=1 Tax=Coccomyxa sp. Obi ... [more]
A0A0L0HA08_SPIPD1.160e-2237.93Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A4P9WMZ5_9FUNG1.250e-2237.76Actin family (Fragment) n=1 Tax=Blyttiomyces helic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.40coord: 1..147
e-value: 6.0E-31
score: 109.4
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 2..137
IPR004000Actin familyPFAMPF00022Actincoord: 3..138
e-value: 6.3E-27
score: 94.2
IPR004000Actin familyPANTHERPTHR11937ACTINcoord: 5..134
IPR030054Actin-related protein 6PANTHERPTHR11937:SF47ACTIN-RELATED PROTEIN 6coord: 5..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig860contigL-elsbetiae_contig860:26837..31595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig860.17639.1mRNA_L-elsbetiae_contig860.17639.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig860 26837..31595 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig860.17639.1 ID=prot_L-elsbetiae_contig860.17639.1|Name=mRNA_L-elsbetiae_contig860.17639.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp
MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGKIKGQTQMAVGDETAHA
SRDSAPISILRPFDRGYITNWEPEFEVWRRMLSRNFLNADARDSRLLATE
APFGPLVLQEAANEVVFEEFGFAACYRCPSAALSCYHEQVLEEERESM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR030054Arp6