mRNA_L-elsbetiae_contig8588.17624.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: D8LFK9_ECTSI (BCNT-C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFK9_ECTSI) HSP 1 Score: 171 bits (432), Expect = 4.240e-46 Identity = 86/98 (87.76%), Postives = 91/98 (92.86%), Query Frame = 1
Query: 1225 VKRTVTAGSAEHAAAXXXKKKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 1518
VKR VTAGSAEH AA KK GGLDNVLAA+DGPKSISTVTKSSMDW+TYKA EG+EG+M+QATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA
Sbjct: 155 VKRKVTAGSAEHVAAAGAKK-GGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGMEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 251
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: I2CQ62_NANGC (Craniofacial development protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ62_NANGC) HSP 1 Score: 94.0 bits (232), Expect = 4.380e-19 Identity = 47/78 (60.26%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 1279 KKKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 1512
KKK GLD VL + GP+ ISTV KSS DW+T+KA G+E E+ QATKDG YL K+DFL+RCD R FE E +AR + R
Sbjct: 41 KKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 116
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: A0A4D9CWA7_9STRA (BCNT-C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA7_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 7.540e-17 Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 1282 KKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 1512
KK GLD VL + GP+ ISTV KSS DW+T+KA G+E E+ QATKDG YL K+DFL+RCD R FE E +AR + R
Sbjct: 232 KKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNASR 306
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: A0A8K1C5W9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5W9_PYTOL) HSP 1 Score: 89.7 bits (221), Expect = 7.970e-17 Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 1225 VKRTVTAGSAEHAA----AXXXKKKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 1512
VK V E++ A K K LD+VLA+ +GPK I+T+ K+S+DWD +K EGIE E++QATKDG Y+ KQ+FLQR D+++FE E R+ +R
Sbjct: 113 VKEVVKFAGQEYSVSKRVAPVAKSKQKLDDVLASFEGPKKINTIEKTSIDWDKFKEQEGIEDELKQATKDG--YIEKQEFLQRMDLKRFEIEKAERERQR 210
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: A0A1V9YZ79_9STRA (BCNT-C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZ79_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.000e-16 Identity = 47/92 (51.09%), Postives = 59/92 (64.13%), Query Frame = 1
Query: 1243 AGSAEHAAAXXXKKKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 1518
AG AA +KK GLD V+ A+ PK +ST+ KSS+DWD++K EGI E++ TKDG YL KQDFL R D+RKFE E R+ R A
Sbjct: 138 AGKEYTVAAKAPEKKSGLDAVVDALQQPKKVSTIEKSSLDWDSFKEKEGIADELEHHTKDG--YLEKQDFLHRVDLRKFEIEKAEREKVRRA 227
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: A0A6G0WCK9_9STRA (BCNT-C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCK9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.370e-16 Identity = 48/92 (52.17%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 1243 AGSAEHAAAXXXKKKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 1518
AG + GLD+ LAA++ PK IST+ KSSMDW+++K EGI E+QQ TKDG YL KQDFL R DVRKFE E R R A
Sbjct: 136 AGQEYSVTKKVSSSESGLDSALAALNQPKKISTIEKSSMDWESFKDKEGIADELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 225
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: K3WLG7_GLOUD (BCNT-C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLG7_GLOUD) HSP 1 Score: 89.7 bits (221), Expect = 1.410e-16 Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 1195 YCRCC*FLDRVKRTVTAGSAEHAAAXXXKKKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 1512
Y + C F + T A A+A G+D VLA++D PK +ST+ K+SMDWD +K VEGIE E+ Q TKDG Y+ KQ+FLQR D+++FE E R KR
Sbjct: 142 YSQLCVFSWLCSVSKTVNPAAKASAK------GIDQVLASLDAPKKVSTMEKTSMDWDKFKEVEGIEEELHQYTKDG--YIEKQEFLQRVDLKQFEIEKAERDKKR 239
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: A0A485K980_9STRA (Aste57867_1012 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K980_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.420e-16 Identity = 47/79 (59.49%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 1282 KKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKRDA 1518
K LD+ LAA++ PK IST+ KSS+DWDT+K EGI E+QQ TKDG YL KQDFL R DVRKFE E R R A
Sbjct: 153 KASALDSALAALNQPKKISTIEKSSVDWDTFKDKEGISDELQQYTKDG--YLEKQDFLHRVDVRKFELEKAERDKLRRA 229
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: A0A3R7H270_9STRA (BCNT-C domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H270_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 4.870e-16 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 1
Query: 1243 AGSAEHAAAXXXKKKGG---LDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 1512
AGSA AA K GG LD VLA++D PK +ST+ KSS+DWD +K EGI+ E++Q TKDG Y+ KQ+FLQR D+++FE E R +R
Sbjct: 135 AGSAGEAAGKPAK--GGAKALDKVLASLDEPKKVSTMEKSSLDWDKFKEAEGIDDELKQYTKDG--YIEKQEFLQRLDLKRFEIEKAERDKQR 223
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Match: A0A5D6XMC1_9STRA (BCNT-C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMC1_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 4.870e-16 Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 1225 VKRTVTAGSAEHAAAXXXKKKGGLDNVLAAIDGPKSISTVTKSSMDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSKR 1512
V+ +VT ++ A A G+D+VLA++DGPK +ST+ KSS+DWD +K EGIE E++Q TK+G YL KQDFL R D +FE E R KR
Sbjct: 132 VEYSVTTRASRPAKAAGSS---GVDHVLASLDGPKKVSTIEKSSLDWDQFKEAEGIEDELRQYTKNG--YLEKQDFLTRVDRNQFEREKAERDKKR 222 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8588.17624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8588.17624.1 >prot_L-elsbetiae_contig8588.17624.1 ID=prot_L-elsbetiae_contig8588.17624.1|Name=mRNA_L-elsbetiae_contig8588.17624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=55bp MDWDTYKAVEGIEGEMQQATKDGKGYLNKQDFLQRCDVRKFETELEARQSback to top mRNA from alignment at L-elsbetiae_contig8588:6271..8499- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8588.17624.1 ID=mRNA_L-elsbetiae_contig8588.17624.1|Name=mRNA_L-elsbetiae_contig8588.17624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2229bp|location=Sequence derived from alignment at L-elsbetiae_contig8588:6271..8499- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8588:6271..8499- >mRNA_L-elsbetiae_contig8588.17624.1 ID=mRNA_L-elsbetiae_contig8588.17624.1|Name=mRNA_L-elsbetiae_contig8588.17624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=330bp|location=Sequence derived from alignment at L-elsbetiae_contig8588:6271..8499- (Laminarionema elsbetiae ELsaHSoW15)back to top |