prot_L-elsbetiae_contig858.17618.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig858.17618.1
Unique Nameprot_L-elsbetiae_contig858.17618.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length607
Homology
BLAST of mRNA_L-elsbetiae_contig858.17618.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 577 bits (1486), Expect = 1.760e-190
Identity = 325/619 (52.50%), Postives = 413/619 (66.72%), Query Frame = 0
Query:    1 MDAVKRTTPCVMWSEAVAKFSSAMSGTLPESDDPGKVLLRAMRHREAEGGALLSLADASAPVATDMLHLDPSWLVELVRRLADHNLVDEDEKKQGTIKQQLRRYAKEQRTDFEPLWKMHRVYCKSGHLSQDYLRFLWTYREVKSLGPVVVLTERKIESIISTMVRLQVMYKARGKGDFVVPARLPEYGDQRVLNPDNIGEIVAVMKCSFGIVYPPPGIVGRFLAWLTP-VDRYGECWQHGAFVSYNY----HKVFFFESEDSEPHEDGTESKFAGLTLGVQGRREEALPILEDLKVSLTELVSDKTD--PGLASSMSFEEPVETKSNELLTLRSLLDNIGDR-----------------LEKIEMKLDGVANQLVEQMMLPASAKQEECPYPRLVILVPKAE--ECRKQGRIQREGWNKWTDAWKKLDESVGLHQEFRLRFFCEYSLAEVPCGPDGCGYLIKKPKDWVKKCVPLMQASLWVLRVAVGMVSHVDLPVNEVLGAAIKGTGETLLDGIGTEVPSTIKTDQ-SAFGEGVPVSKMKEFKDLQEPAYKSMCEFMREVEAEASPPRRWFACPPCYRESGPPTVSWKDSMVQERN-GHGGWAWVLRKNQEAYVRAGG 591
            MD +K T PCV+WS AV +F   MSG  P + D GKVLLRAM+HREAEGG LLSLAD SAPVA+DMLHLDPSWL+ELVRRLADHNLVD+D+KK+G+++Q LR YAK Q     PL+ +H VYC+SG L++ YLRFLW +R+++  GP V LT+ + ESI+STM RL VMY AR   + VVPARL EYGDQR+  PD +  +V  ++CSFG VYPPPGIVGRFLAW    V  YGECWQHGAF SY Y    + VF +ESE  E H+DGT   FAGLTLG+QG   +A  +LE+L+ SL  LVSD     PGL   M F    E +S+ L+ L S+LD                      LE+   KL G+  QL+EQ +LPAS   E+  YPRLV++ P+ E  E     RIQR GW++WT A  ++    G H+ FR+ F C + L+EVPCGP G G+ IK PKDWVK+ +PLMQ SLW+LRVAVG VS+VDLP+N+VLGA +  TG  LL+G+G +VP  I +     F EG   ++M  FKDL+  +Y+ +C+FMR+V  E+SPP+    C PC+R      V W+D MVQ RN   G  AWVL+ N++A++R  G
Sbjct:  551 MDVLKGTAPCVLWSRAVEEFRRKMSGIPPVAGDAGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIEGPGPTVDLTDPEFESIVSTMERLLVMYTARDADNLVVPARLQEYGDQRI--PDRLTNMVLKIECSFGQVYPPPGIVGRFLAWSAQQVADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPPPQAAEVLEELRKSLESLVSDSAYGYPGLVGPMYFRPAEEIESSLLVRLGSVLDXXXXXXXXXXXXXXXXXXXXXSLEETVRKLGGIVTQLLEQDLLPAS--DEQSAYPRLVLVRPELETAEDMTHERIQRAGWDRWTKALSEM----GFHK-FRVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWLPLMQVSLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVG-KVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRDV--ESSPPQCLSGCLPCHRTLA--VVDWRDHMVQVRNPSTGRRAWVLKTNEKAFLREHG 1155          
BLAST of mRNA_L-elsbetiae_contig858.17618.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 1.990e-78
Identity = 206/623 (33.07%), Postives = 317/623 (50.88%), Query Frame = 0
Query:    8 TPCVMWSEAVAKFSSAMSGTLPES-----------DDPGKVLLRAMRHREAEGGALLSLADASAPVATDMLHLDPSWLVELVRRLADHNLVDEDEKKQGTIKQQLRRYAK---EQRTDFEPLWKMHRVYCKSGHLSQDYLRFLWTYREVKSLGPVV--VLTERKIESIISTMVRLQVMYKARGKGD-----FVVPARLPEYGDQRVLNPD-NIGEIVAVMKCSFGIVYPPPGIVGRFLAWLTP-VDRYGECWQHGAFVSY----NYHKVFFFESEDSEPHEDGTESKFAGLTLGVQGRREEALPILEDLKVSLTELVSDKTD--PGLASSMSFEEPVETKSNELLTLRSLLDNIGDRLEKIEMKLDGVANQLVEQMM--LPASAKQEECPYPRLVILVP---------KAEECRKQGRIQ-REGWNKWTDAWKKLDESVGLHQEFRLRFFCEYSLAEVPCGPDGCGYLIKKPKDWVKKCVPLMQASLWVLRVAVGMVSHVDLPVNEVLGAAIKGTGETLLDGIGTEVPSTIKTDQSAFGEGVPVSKMKEFKDLQEPAYKSMCEFMREVEAEASPPR-RWFACPPCYR----ESGPPTVSWKDSMVQERNGHGGWAWVLRKNQE 584
            TP V+W +AV  F         E            +D    L  AM+HREAEGG +LSL D S+P  +DM+H+DP WL+ELVRR+ DHNLVD+  KKQ  I Q+L  Y +   +  + ++ L + H  + + G L++DYLRFLW +R+++  G      L +   +S++ TM++   +Y + G+        +VPARLPE+G+  +L     +GE+V      F   + P GI+GRFLA+ +   +  G+CWQHGA + +    N H V   E+   +    G +S F  + + V+G+  EA  +L ++   L  L+ D     PGL   + FEE   T+S++          +  +L KI   L+    + V       P+     E PYPRLV+L P         +AEE    G IQ R  W++W D  +      G   +F L F CE   +E+PCGP G G+ +  P        PL+Q +LW++++AVG V+ VDLP+++VL A +  T   +L+   ++   +   D+    EG        FK+L  PAYK++C+FM   + E  P   R  +C P YR    E  P    W+  M   +NG G ++WV + +++
Sbjct: 1534 TPYVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQSDMIHVDPRWLIELVRRVTDHNLVDK--KKQNKILQELLEYDRTRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQLDKDAFDSMVDTMIKYLFIYPSHGECSNAEDCHIVPARLPEHGNDNILEESIGLGEVVVGKTAWFLRSHAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPG-QSTFPAIAICVKGKTAEAKGVLREVGEQLLSLLQDNIHGYPGLRLPI-FEELNITQSDQFQV--HFERYLATQLAKI---LEDTRRESVRMFRAAFPSYGDPVELPYPRLVLLKPVETTSIQETQAEES-VNGAIQLRRTWDRWIDLCRS-----GGSCDFVLVFLCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVDLPLHDVLEAFLHATAAEVLEAAPSQFSPSATLDEGQ-QEG--------FKELHGPAYKALCDFM--TKEEFGPEEARCESCLPWYRPRVHEPIPSEFDWRSHMEMIKNGIG-YSWVRKSSEQ 2129          
BLAST of mRNA_L-elsbetiae_contig858.17618.1 vs. uniprot
Match: A0A6H5JR01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 3.860e-69
Identity = 186/616 (30.19%), Postives = 304/616 (49.35%), Query Frame = 0
Query:   11 VMWSEAVAKFSSAMSG----------TLPESDDPGKVLLR-AMRHREAEGGALLSLADASAPVATDMLHLDPSWLVELVRRLADHNLVDEDEKKQGTIKQQLRRYAK---EQRTDFEPLWKMHRVYCKSGHLSQDYLRFLWTYREVKSLGPV--VVLTERKIESIISTMVRLQVMYKARGK-----GDFVVPARLPEYGDQRVLNPDNIG--EIVAVMKCSFGIVYPPPGIVGRFLAWLTP-VDRYGECWQHGAFVSY----NYHKVFFFESEDSEPHEDGTESKFAGLTLGVQGRREEALPILEDLKVSLTELVSDKTDPGLASSMSFEEPVETKSNELLTLRSLLDNIGDRLEKIEMKLDGVANQLVEQMMLPASAKQEECPYPRLVILVPKAEECRKQGRIQ--------REGWNKWTD-AWKKLDESVGLHQEFRLRFFCEYSLAEVPCGPDGCGYLIKKPKDWVKKCVPLMQASLWVLRVAVGMVSHVDLPVNEVLGAAIKGTGETLLDGIGTEVPSTIKTDQSAFGEGVPVSKMKEFKDLQEPAYKSMCEFMREVE-----AEASPPRRWFACPPCYRESGPPTVSWKDSMVQERNGHGGWAWVLRKNQE 584
            V+W +AV  F                  P SD+     L+ AM+HREAEGG +LSL + S+P  +DM+H+DP WL++LVRR+ DHNLVD+  K +  I ++L  Y +   +  + ++ L + H  + + G L++ YLRFLW +R+++  G    V L     +S++ TM++   +Y + G+     G ++VPARLPE G   VL  ++IG  E+V      F   + P GI+G FLA+ +   +  GECWQHGA + +    N H +   E+   +    G       + + V+G+  EA  +L ++   L  L+ D         + FE  + TK      L ++L++   R E + M           +   P+  +  E  YPRLV+L P      ++ +++        R  W++W D  W       G   +F L   CE   +E+PCGP G G+ +  P        PL+Q +LW++++AVG V+ V LP+++VL A +  T   +L+   ++   +   D+    EG        FK+L  PAYK++C+FMR+ E     A+  P   W    P   E       W+  M + +NG G ++WV + +++
Sbjct:   91 VLWGDAVKAFQRYFQEKHKEEREDERNKPLSDEEASSNLKEAMKHREAEGGVILSLREESSPAQSDMIHVDPRWLIDLVRRVTDHNLVDK--KNEHEILKELLEYGRTRPDTLSGYKNLCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQLENDTFDSMVDTMIKYLFIYPSHGECSKAEGFYIVPARLPEIGKDNVLE-ESIGLDEVVVGKTAWFLRSHAPTGIIGCFLAFTSSRFEASGECWQHGAHIQWKKDSNEHDMLLCETTIEKDIIPGP-GTLPAIAICVKGKTAEAKGVLREVGEQLLSLLKDVIH------VHFERYLATK------LATILEDT--RRESVRMF----------RAAFPSYGEHVELLYPRLVLLKPVETTSIQETQVESVSGAKKLRRTWDRWIDLCWS------GGSCDFVLVILCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVYLPLHDVLEAFLHATAAEVLEAAPSQFSPSATLDEGQ-QEG--------FKELHGPAYKALCDFMRKEEFGPEEAQCCPCLPWHR--PRVHEPILSEFDWRSHMYKIKNGVG-YSWVRKSSEQ 660          
BLAST of mRNA_L-elsbetiae_contig858.17618.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.320e-38
Identity = 149/555 (26.85%), Postives = 261/555 (47.03%), Query Frame = 0
Query:    9 PCVMWSEAVAKFSSAMSGTLP----ESDDPGKVLLRAMRHREAEGGALLSLADASAPVATDM-------LHLDPSWLVELVRRLADHNLVDEDEKKQGTIKQQLRRYAKEQRTDFEPLWKMHRVYCKSGHLSQDYLRFLWTYREVK------SLGPVVVLTERKIESIISTMVRLQVMYKARGKGD-FVVPARLPEYG----DQRVLNPDNIGEIVAVMKCSF-GIVYPPPGIVGRFLAWLTPVD-RYGECWQHGAFVSYNYHKVFFFESEDSEPHEDGTESKFAGLTLGVQGRREEALPILEDLKVSLTELVSD------------------------KTDPGLASSMSFE--EPVETKSNELLTLRSLLDNIGDRLEK---------------IEMKLDGVANQLVEQMMLPASAKQEECPYPRLVIL----VPKAEECRKQGRIQREGWNKWTDAWKKLDESVG-LHQEFRLRFFCEYSLAEVPCGPDGCGYLIK--KPKDWVKKCVPLMQASLWVLRVAVGMVSHVD-LPVNEVLGAAIKGTGETLLDGIG 490
            P V++ EA+++F   ++G  P    ++ +  +V L A++  E +G  LL+ AD    +  DM       +H++P+W  +L+RR+ D  L+D  + +Q  +   ++R       D   L K H  +  +G L++ Y+RFLW  R+++      +  P + ++E  I +I+ +++ ++ M++ R   D ++VP+ LP++     D + L    +G  +   +  F G    PPG++ R LAW    D R   CW+ G   S+  H V  +E      H D   +      +G     E+A   LED+   L +LV D                        +T  GL +  + E  E +  K  EL      LD+I   +EK               + ++LD +A    E +++ A   +++ P PRL+++    VP++++ R     +RE  +       +L    G   Q +R+RF C Y L+   CG DG GY ++    K W++K +P++Q +LW +RV V +VS  D LPV++V+G   +  GE     IG
Sbjct:  328 PFVLFPEALSRFLE-VAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEME-DMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQEKVADLIKRQPPASVGD---LSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNEDHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFKEHLVLLYE------HRDAGRAVIECHAMG-SAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEEL---GQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLLVSA---EKDIPCPRLIMVSEDDVPESDQSR-LSHFRREMMD-------QLFLGKGQTPQHYRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQVALWTVRVGVSVVSRADILPVDDVMGKLREVAGEEAATMIG 856          
BLAST of mRNA_L-elsbetiae_contig858.17618.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 4.650e-29
Identity = 139/555 (25.05%), Postives = 248/555 (44.68%), Query Frame = 0
Query:    9 PCVMWSEAVAKF------SSAMSGTLPESDDPGKVLLRAMRHREAEGGALLSLADASA------PVATD--MLHLDPSWLVELVRRLADHNLVD--EDEKKQGTIKQQLRRYAKEQRTDFEPLWKMHRVYCKSGHLSQDYLRFLWTYREVKSLGPV--------VVLTERKIESIISTMVRLQVMYKAR-GKGDFVVPARLPEYG----DQRVLNPDNIGEIVAVMKCSFGIVYP-PPGIVGRFLAWLTPVD-RYGECWQHGAFVSYNY-HKVFFFESEDSEPHEDGTESKFAGLTLGVQGRREEALPILEDLKVSLTELVSDKTD--PGLASSMSFEEPVE----TKSNELLTLRS-----LLDNIGDRLEKIEMKLDGVA------------------NQLVEQMMLPASAK----------------QEECPYPRLVILVPKAEECRKQGRIQREGWNKWTDAWKKLDESVGLHQEFRLRFFCEYSLAEVPCGPDGCGYLIKKP--KDWVKKCVPLMQASLWVLRVAVGMVSHVD-LPVNEVLGAAIKGTGE 483
            P +++ EA++ F       S   G   E +   +  L A+   E +G  L++ AD         P +    ++H++P+W  +L+RR+ D  L+D  + EK    IK+Q      E       L K H  +  +G +S+ Y++FLW  R+++ LGP           ++E  I +++ +++ ++ M++ R  K  ++VP+ LP++     D + L   ++G  +   K   G   P PPG++ R LAW +  D R   CW+ G   ++N  H V  +E       ++   S      +G     E+A   L+D+   L  LV D     PG+   + F+  VE    T + EL  L S     L D++    +++  K + +A                  N  ++Q+    S K                +++ P PRL++++          R+     +   D   + +      Q +R+RF C Y L    CG DG GY ++    ++W+K C+P+++ SLW+LRV + +V+  D LPV+ V+    +  GE
Sbjct:  495 PFILFPEALSLFLEVAGEKSLFGGNATEGE---QAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKRQSPASVAE-------LSKQHGRFFLAGEVSKRYMKFLWKERDLE-LGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNKDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFNRKHLVLLYEHR-----KEAGRSVIECHAMG-SAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIW--LFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAGGVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLLVSVEKDIPCPRLIMVLEDVSPGSALSRLSHFRRD-MVDKLLRREGEGPAPQCYRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVAGE 1029          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig858.17618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKS5_ECTSI1.760e-19052.50LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LK68_ECTSI1.990e-7833.07LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JR01_9PHAE3.860e-6930.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSN1_9PHAE1.320e-3826.85Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ1_9PHAE4.650e-2925.05Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 329..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig858contigL-elsbetiae_contig858:7587..10084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig858.17618.1mRNA_L-elsbetiae_contig858.17618.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig858 7511..10826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig858.17618.1 ID=prot_L-elsbetiae_contig858.17618.1|Name=mRNA_L-elsbetiae_contig858.17618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=607bp
MDAVKRTTPCVMWSEAVAKFSSAMSGTLPESDDPGKVLLRAMRHREAEGG
ALLSLADASAPVATDMLHLDPSWLVELVRRLADHNLVDEDEKKQGTIKQQ
LRRYAKEQRTDFEPLWKMHRVYCKSGHLSQDYLRFLWTYREVKSLGPVVV
LTERKIESIISTMVRLQVMYKARGKGDFVVPARLPEYGDQRVLNPDNIGE
IVAVMKCSFGIVYPPPGIVGRFLAWLTPVDRYGECWQHGAFVSYNYHKVF
FFESEDSEPHEDGTESKFAGLTLGVQGRREEALPILEDLKVSLTELVSDK
TDPGLASSMSFEEPVETKSNELLTLRSLLDNIGDRLEKIEMKLDGVANQL
VEQMMLPASAKQEECPYPRLVILVPKAEECRKQGRIQREGWNKWTDAWKK
LDESVGLHQEFRLRFFCEYSLAEVPCGPDGCGYLIKKPKDWVKKCVPLMQ
ASLWVLRVAVGMVSHVDLPVNEVLGAAIKGTGETLLDGIGTEVPSTIKTD
QSAFGEGVPVSKMKEFKDLQEPAYKSMCEFMREVEAEASPPRRWFACPPC
YRESGPPTVSWKDSMVQERNGHGGWAWVLRKNQEAYVRAGGNRDTASTGS
APAPTS*
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