mRNA_L-elsbetiae_contig857.17609.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 177 bits (450), Expect = 4.150e-45 Identity = 245/404 (60.64%), Postives = 284/404 (70.30%), Query Frame = 3
Query: 195 DLLSEVLTSEEWAQLLKAPLERAARKGNRGIAQKLVGAGAGMGKALHEAVLGGHKEVVNDLLEAGASIAGKDAKGNAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADVSPRCTFLRECVIHQAVQTDEVEISRAVLEHGADVDAASGRNYSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKYWAAKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAADVACATAQYGG----DTNRVQELLVNAPADRVWRRRGYLVLCRAHPDRV-QLIQESSRAPAGVAPKTRSGTEPTRA----------ERTSGGWADVVAMMLGLQEEGIFRAVVGYL 1361
D + E+LTS++ A+LL+A LE AA KGN+ +AQ+LV AGA +G ALH AV GGH+E+V+DLLE+ AS+A D G P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + R T + H A VEI RA++EHGADVDA + +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A ++AG QGA +VV+SLLRAGADET+ N +G A D+ + D RV+ELL NAPADR WRRRGYL++CRA PDRV + S VA +TRS + RA E T G WA VV+ ++ LQEEGIFR +V YL
Sbjct: 3 DFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMK------AGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 127 bits (318), Expect = 8.130e-28 Identity = 169/414 (40.82%), Postives = 208/414 (50.24%), Query Frame = 3
Query: 141 MANREGREALRGAEEKTFDLLSEVLTSEEWAQLLKAPLERAARKGNRGIAQKLVGAGAGMGKALHEAVLGGHKEVVNDLLEAGASIAGKDAKGNAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADVSPRCTFLRECVIHQAVQTDEVEISRAVLEHGADVDAASGRNYSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKYWAAKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAADVACATAQYGGDTNRVQE-------LLVNAPADRVWRRRGYLVLCRAHPDRVQLIQESSRAPAGVAPKTRSGTEPTRAERTSGGWADVVAMMLGLQEEGIFRAVVGYL 1361
MAN R ALRG EE+ FDL +E T ++WA L++ LE AA +G+ + +KLV AGA +G A+H AV GGH ++ LLE+GAS + D +G P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AD++ R + V+ R ++EHGADVDA NY + + + A AG QG +VVD LLR GADET + G AAD A + +R+ E LL NAPADR WRRR LVLCRA PD++QL + A + A +LGL EEGIFR +V ++
Sbjct: 1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDAT---NYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAAD---AIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRI--------------------------ARLEARVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 107 bits (266), Expect = 4.790e-21 Identity = 192/410 (46.83%), Postives = 233/410 (56.83%), Query Frame = 3
Query: 147 NREGREALRGAEEKTFDLLSEVLTSEEWAQLLKAPLERAARKGNRGIAQKLVGAGAGMGK-ALHEAVLGGHKEVVNDLLEAGASIAGKDAKGNAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADVSPRCTFLRECVIHQAVQTDEVEISRAVLEHGADVDAASGRNYSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKYWAAKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAADVACATAQYG----GDTNRVQELLVNAPADRVWRRRGYLVLCRAHPDRVQLIQESSRAPAGVAPKTRSGTEPTRAERTSGGWADVVAMMLGLQEEGIFRAVVGYL 1361
N+ +E L+G EE+ DL+ + E ++ L APLE A +G+ G+AQKLV AGA +G ALHEAV GH + LLE GAS+ + PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ R + A + +VEI R +++HG +V N +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AK +G+ QVV LLR GADET++ +G+ AAD T ++ GD R + LL APADR WRRRG LVLC A+PDR+QL G A +V +LGL+E G+FR +V YL
Sbjct: 12 NKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEV------NLAAAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAAD-RIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL---------------------------GGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.230e-20 Identity = 70/152 (46.05%), Postives = 93/152 (61.18%), Query Frame = 3
Query: 957 AKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAADVACATAQYGG----DTNRVQELLVNAPADRVWRRRGYLVLCRAH--PDRVQLIQESSRAPA-GVAPKTRSGTEPTRAERTSGGWADVVAMMLG-------LQEEG---IFRAVVGYL 1361
A +AG+ G ++VD LLR GADET +++ G AAD+ + D +RV++LL APADR WRRRG+L+L RAH RVQ +S+APA GVA +TRS EP+RAE WA VV+M++G L +G IF +VGYL
Sbjct: 630 AAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEID---WAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 104 bits (260), Expect = 2.980e-20 Identity = 229/409 (55.99%), Postives = 269/409 (65.77%), Query Frame = 3
Query: 147 NREGREALRGAEEKTFDLLSEVLTSEEWAQLLKAPLERAARKGNRGIAQKLVGAGAGMGK-ALHEAVLGGHKEVVNDLLEAGASIAGKDAKGNAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADVSPRCTFLRECVIHQAVQTDEVEISRAVLEHGADVDAASGRNYSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKYWAAKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAADVACATAQYGGDTN---RVQELLVNAPADRVWRRRGYLVLCRAHPDRVQLIQESSRAPAGVAPKTRSGTEPTRAERTSGGWADVVAMMLGLQEEGIFRAVVGYL 1361
N+ +E ++G ++ DL+ + E ++ L APLE A G+ G+A+KLV AGA +G ALHE V GH + LLE GAS+ + PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ R T + A +D VEI R +++HG +V A+ +ALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A G+ QVVD LLR GADET+++ +GE AAD + D R + LL APADR WRRRG LVLCRAHPDR+QL G A +VA + GL+E G+FR +V YL
Sbjct: 15 NKAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHRANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----AAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQL---------------------------GGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 102 bits (253), Expect = 3.410e-19 Identity = 196/461 (42.52%), Postives = 237/461 (51.41%), Query Frame = 3
Query: 141 MANREGREALRGAEEKTFDLLSEVLTSEEWAQLLKAPLERAARKGNRGIAQKLVGAGAGMGKALHEAVLGGHKEVVNDLLEAGASIAGKDAKGNAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------GADVSPRCTFLREC------------------------VIHQAVQTDEVEISRAVLEHGADVDAASGRNYSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKYWAAKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAAD-----VACATAQYGGDTNRVQELLVNAPADRVWRRRGYLVLCRAHPDRVQLIQESSR-APAGVAPKTRSGTEPTRAERTSGG-------------WADVVAMMLGLQEEGIFRAVVGYL 1361
MAN R+ LRGA + DL+S T EEWA LK PLE A R G+R +A LV GA G A++EA+ G EV++ LL+ GAS++ DA+G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GA S +H AV ++V+ + +LE GAD+ S + L XXXXXXXXXXXXXXXXXXXXXX AA AG QG+ ++VD LLR GADET + G+ AD + G + V ELL NAPADR WRRRG LVLCRA R +L QE G++ +TRS + R++ G W ++ L+EEGIFR+VVG+L
Sbjct: 1 MANTR-RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAVNEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXX--------------------------------------AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 3.920e-16 Identity = 64/151 (42.38%), Postives = 84/151 (55.63%), Query Frame = 3
Query: 966 AGTQGAQQVVDSLLRAGADETLLNDEGEAAAD-VACATAQYGG---DTNRVQELLVNAPADRVWRRRGYLVLCRAHPDRVQLIQESSRAPAGVAPK-TRSGTEPTRAERTSGG--------------WADVVAMMLGLQEEGIFRAVVGYL 1361
AG +GA +VVD LLR ADET + G + V C T + + RV +LL AP DR WRRRG LVLCRAHP+R+ L Q +S + TRS T+ E+ +GG W+++V +LGL +EGIFR +VGYL
Sbjct: 250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.070e-15 Identity = 53/106 (50.00%), Postives = 64/106 (60.38%), Query Frame = 3
Query: 954 AAKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAADV----ACATAQYGGDTNRVQELLVNAPADRVWRRRGYLVLCRAHPDRVQLIQESSRAPAGVAPKTRSGTE 1259
A AG +G +VVDSLLR+GADET+L+ EG AA D+ G +RV++LLVNA ADR W RR YLVLCR HPDR A +GVA T + TE
Sbjct: 91 ATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDR---------ADSGVARATCNETE 187
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 7.330e-15 Identity = 49/105 (46.67%), Postives = 65/105 (61.90%), Query Frame = 3
Query: 954 AAKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAADVACATAQYGG------DTNRVQELLVNAPADRVWRRRGYLVLCRAHPDRVQLIQESSRAPAGVAPKTRS 1250
AA++AG QG +VD LLR GADET LN +G AA+V +Y D RV++LL NAPADR WRRRG LVLCRA + + ++ +S + G+ P+ S
Sbjct: 261 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMS 365
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 1.880e-14 Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 3
Query: 954 AAKEAGTQGAQQVVDSLLRAGADETLLNDEGEAAADVACATAQYGG------DTNRVQELLVNAPADRVWRRRGYLVLCRAHPDRVQLIQESSRAPAGVAPKTRS 1250
AA++AG QG +VD LLR GADET LN +G AA+V +Y D RV++LL NAP DR WRRRG+LVLCRA + + ++ +S + P+ RS
Sbjct: 212 AARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRS 316 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig857.17609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig857.17609.1 >prot_L-elsbetiae_contig857.17609.1 ID=prot_L-elsbetiae_contig857.17609.1|Name=mRNA_L-elsbetiae_contig857.17609.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=408bp MANREGREALRGAEEKTFDLLSEVLTSEEWAQLLKAPLERAARKGNRGIAback to top mRNA from alignment at L-elsbetiae_contig857:24367..31671- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig857.17609.1 ID=mRNA_L-elsbetiae_contig857.17609.1|Name=mRNA_L-elsbetiae_contig857.17609.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7305bp|location=Sequence derived from alignment at L-elsbetiae_contig857:24367..31671- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig857:24367..31671- >mRNA_L-elsbetiae_contig857.17609.1 ID=mRNA_L-elsbetiae_contig857.17609.1|Name=mRNA_L-elsbetiae_contig857.17609.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2448bp|location=Sequence derived from alignment at L-elsbetiae_contig857:24367..31671- (Laminarionema elsbetiae ELsaHSoW15)back to top |