mRNA_L-elsbetiae_contig840.17414.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig840.17414.1
Unique NamemRNA_L-elsbetiae_contig840.17414.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: D8LQG7_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG7_ECTSI)

HSP 1 Score: 718 bits (1853), Expect = 6.860e-239
Identity = 487/741 (65.72%), Postives = 515/741 (69.50%), Query Frame = 2
Query:   26 VLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDRLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGKLYSCSGGSSSDGSEFSTGA--GGIEDDPCAPDPQNIPSELLGADSDTEEEREERRDGLREWKEGGDAGGRRPGNGPVTQAPPVAVVAAPIGR-----------RSDCGGSADKKGGGVTAAA---AKAVNPSVLPKTTPLPAAAAAAGEPGDIRREDA--AESSTEPDDTGLERGAPGAPALSAAASGERQASPPXXXXXXXXXXXXXXXXXXXXXXXPTETKED-AGRG-ETRPG----ESEQVGVLETRVPPAGERVIAGGKDGSGGVEV---GGGSR---NAKVEVVAAAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPSALLPAPPPLAPVDARQPFVTP-RKLRSPRPLDVFSSPPLAPVGSGRAVEEDDSEFSLDPGPALPPEKGSTRSREGLPPSGPANARSRGANASAFPLGAVERQLSMGVAGMSMVEA--EAENREGVVAAAPP------AFHDLVKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQRAAQYMVEFLRGQLDIFLFKRFYEDVRCKLNDLVKKDYSLALLESGTCTHRFRRFSNLA 2131
            VLREESG GYDGTKADVWSMGVILYAMLAGNLPFEKELL CSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMD LDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDG+LYS SGGSSSDGS+FS G   GG+E+D  APDPQNIPSELLGADSDTE+E E   +G REWKE  D G  RPG  P    PP+                          S  +KG GV  A    AK   PS  P+ +          E   IR E    A SST     G  R   G P  +            XXXXXXXXXXXXX           TE KED A RG + +PG     S   G  E  V P GE  + GG DG G VE+   G G R   +A+   VA   AV                    XXXXXXXXXXXXXXXXXXXX                 LAPV+   PF TP RKLRSPRPLD FSSPPLAPVGSGRAVEE++SEFSLD GPALPPEKG  RSREGLPP+GP +ARSRG N+SAF LG VERQLSMGVAG+S++EA  +AE R+GVVA          AFHDLVKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQ AAQYMVEFLRGQLDIFLFKRFYEDVRCKLNDLVKKDYSLALLESGTCTHRF RFSNLA
Sbjct:  405 VLREESGDGYDGTKADVWSMGVILYAMLAGNLPFEKELLACSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRLYSGSGGSSSDGSDFSAGGAGGGVEEDWRAPDPQNIPSELLGADSDTEDEEEHANNGSREWKESSDIGLHRPGYTPALALPPLPXXXXXXXXXXXXXXXXXXXEKQSTSSVGRKGVGVGPAKEVPAKTKRPSTTPEVSV---------ELRGIREEGEGPAGSSTRLGGRGSAREGQGHPDAAXXXXXXXXXXXXXXXXXXXXXXXXXTTAGDANPVPSTEAKEDNASRGMKQQPGGEHVASRSSGEEEKGVTPKGEGGVGGG-DGKG-VELETTGAGGRQVLSARRVRVATEVAVAAEAAEEGAAKEAQLAAITAXXXXXXXXXXXXXXXXXXXX-----------------LAPVEITDPFTTPPRKLRSPRPLDAFSSPPLAPVGSGRAVEEEESEFSLDAGPALPPEKGRARSREGLPPAGPGHARSRGENSSAFSLGVVERQLSMGVAGISIMEAAGQAEKRDGVVAXXXXXXXXXXAFHDLVKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQGAAQYMVEFLRGQLDIFLFKRFYEDVRCKLNDLVKKDYSLALLESGTCTHRFSRFSNLA 1117          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A6H5K1K0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1K0_9PHAE)

HSP 1 Score: 716 bits (1847), Expect = 1.100e-237
Identity = 496/742 (66.85%), Postives = 522/742 (70.35%), Query Frame = 2
Query:    2 SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDRLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGKLYSCSGGSSSDGSEFSTGA--GGIEDDPCAPDPQNIPSELLGADSDTEEEREERRDGLREWKEGGDAGGR-RPGNGPVTQAPP---------VAVVAAPIGRRSDCGGSADKKGGGVTAAAAKAVNPSVLPKTTPLPAAAAAAGEPGDIRREDA--AESSTEPDDTGLERGAPGAPALSAAASGER--------QASPPXXXXXXXXXXXXXXXXXXXXXXXPTETKEDAGRGETRPGESEQVGVLETRVPPAGERVIAGGKDGSGGVEVGGGSR-NAKVEVVAAAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPSALLPAPPPLAPVDARQPFVTP-RKLRSPRPLDVFSSPPLAPVGSGRAVEEDDSEFSLDPGPALPPEKGSTRSREGLPPSGPANARSRGANASAFPLGAVERQLSMGVAGMSMVEA--EAENREGVVAAA------PPAFHDLVKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQRAAQYMVEFLRGQLDIFLFKRFYEDVRCKLNDLVKKDYSLALLESGTCTHRFRRFSNLA 2131
            SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELL CSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMD LDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDG+LYS SGGSSSDGSEFS G   GG+E+D  APDPQNIPSELLGADSDTE+E E   +G REWKE  D G R RPG  P    P          V +VA P  ++S    S  ++G GV  A        V  KT P    A  + E   IR E    A SST     G  R   G P  +               +    XXXXXXXXXXXXXXXXXXXXXXX                                         G GG +V    R     EVV  A A            XXXXXXXXXXXXXXXXXXXXXXXX                      LAPV+  +PF TP RKLRSPRPLD FSSPPLAPVGSGRAVEE++SEFSLD GPALPPEKG  RSREGLPP+GP +ARSRG N+SAF LG VERQLSMGVAG+S++EA  +AE R GVVAAA      PPAFHDLVKRSTRFMTSVPAAVVLRKIATII+ADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQ AAQYMVEFLRGQLDIFLFKRFYEDVRCKLNDLVKKDYSLALLESGTCTHRF RFSNLA
Sbjct:  430 SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLVCSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDCLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGRLYSGSGGSSSDGSEFSAGGAGGGVEEDWRAPDPQNIPSELLGADSDTEDEEEHTNNGSREWKESSDMGLRHRPGYTPAVAQPQPXXXXXXXXVVIVATPPEKQSTS--SVGRRGVGVGPAK------DVPAKTKPPSTTAGVSVELRGIRLEGEGPAGSSTRLGGRGSAREGQGHPDAAXXXXXXXXXXXXXXLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGGGRQVLSARRVRVATEVVVPAEAGEEVAAKQAQMAXXXXXXXXXXXXXXXXXXXXXXXX----------------------LAPVEMTEPFTTPPRKLRSPRPLDAFSSPPLAPVGSGRAVEEEESEFSLDAGPALPPEKGRARSREGLPPAGPGHARSRGENSSAFSLGVVERQLSMGVAGISIMEAAGQAEKRGGVVAAAAVAGTPPPAFHDLVKRSTRFMTSVPAAVVLRKIATIIDADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQGAAQYMVEFLRGQLDIFLFKRFYEDVRCKLNDLVKKDYSLALLESGTCTHRFSRFSNLA 1141          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A7S2RX62_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RX62_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.970e-35
Identity = 80/136 (58.82%), Postives = 102/136 (75.00%), Query Frame = 2
Query: 1709 AAAPPAFHDLVKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQRAAQYMVEFLRGQL-DIFLFKRFYEDVRCKLNDLVKKDYSLALLE-SGTCTHRF 2110
            AA PP F DLVKRSTRF+TSVPAA VLR I  I+N D +PLP P+RN+ Q+ V+H DDY+L++  GGVLV +VQ++L+ G+Q  +QYMVEF RG L DIF FKR++EDVR KL   +K+D S++ L  SG   HRF
Sbjct:  463 AAHPPQFQDLVKRSTRFVTSVPAAEVLRGIEEILNNDTNPLPPPFRNVPQRTVLHLDDYRLDVKWGGVLVYSVQVFLIRGDQGRSQYMVEFRRGHLMDIFQFKRYFEDVRDKLQRYIKEDRSVSYLNASGIIPHRF 598          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A662Y892_9STRA (Protein kinase domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y892_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.140e-33
Identity = 184/699 (26.32%), Postives = 272/699 (38.91%), Query Frame = 2
Query:    2 SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLLAHCSGNPK--DAMDMDRLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGKLYSCSGGSSSDGSEFSTGA----GGIEDDPCAPDPQNIPSELLGADSDTEEEREERRDGLREWKEGGDAGGRRPGNGPVTQAPPVAVVAAPIGRRSDCGGSADKKGGGVTAAAAKAVNPSVLPKTTPLPAAAAAAGEPGDIRREDAAESSTEPDDTGLERGAPGAPALSAAASGERQASPPXXXXXXXXXXXXXXXXXXXXXXXPTETKEDAGRGETRPGESEQVGVLE----TRVPPAGERVIAGGKDGSGGVEVGGGSRNAKVEVVAAAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPSALLPAPPPLAPVDARQPFVTPRKLRSPRPLDVFSSPPLAPVGSGRAVEEDDSEFSLDP------GPALPPEKGSTRSREGLPPSGPANARSRGANASAFPLGAVERQLSMGVAGMSMVEAEAENREGVVAAAPPAFHDLVKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQRAAQYMVEFLRGQLDIFLFKRFYEDVRCKLND 2050
            SP+YVAPEVL + +G GYDG KAD WS+GVILYAM+AGNLPF K+LL C R+ +F  W              S N K  D    + +++P+WFFP HFS   +SL++ LL+PDA  RL+V +AL H WV   KL   S  S  DG     GA     G    P      N+  +      D E++    R                   G V+      ++A+P G    C  S  +            VN  +      +P+                       D+T             ++ SG+   S P                         + + ++ +   +  E+E   +L+     R       +I      +G  E         +E+  A A                                                       A PPL    +R     P + R   P ++F    L     G  + E  S  +LD        P   P+  +T      P +G   AR+        PL A E + +         +A+A   +     APP+++D+V RSTRF+T+VPA +VL  +   +     P PY   N+ Q   +  ++Y+LE+   G+L CTVQ++L    QR   Y+VEF RG +DIF FKRFYE++R K+++
Sbjct:  380 SPHYVAPEVLMD-AGQGYDGAKADAWSIGVILYAMIAGNLPFGKDLLKCVRYDRFRKW--------------SYNTKYSDEDPTNEVEFPTWFFPAHFSLELKSLIAQLLYPDACMRLAVDEALHHAWVCGEKLKKTSPASLEDGQALGNGAPSSPSGSPASPAYKHRMNVLIDTPQHSLDLEQQLHPNR------------------LGSVSPQAITRLLASPHGHTLRCPPSPQQS---------LRVNKHLAGAVGYMPSV----------------------DET-------------SSMSGQTPLSSPRNNSRSNL-----------------KEEVESAKSLAKDDEAESDALLKQDALVREATVTNSMIQSETKAAGEAE--------DIELSEATALEANASRYQHRF-------------------------------------------ASPPLI-TGSRD--TLPTRFRRNSPPELF----LQGFDRGARLREITSGAALDRIKLLGHSPPFVPQTPATVD----PMAGFTIARTL-----TEPLIASEAEAAS--------QADATEEQTAPLTAPPSYNDVVARSTRFLTAVPARLVLSNLELALAISPSPRPYECSNVPQHVTIDWENYQLEVRYAGLLTCTVQVFLF---QRGV-YLVEFRRGHVDIFQFKRFYEEIRAKISE 905          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A397A1G4_9STRA (Protein kinase domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A1G4_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.500e-32
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 2
Query:    2 SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDRLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLD 388
            SP+YVAPEVL++ SG GYDG KAD WS+GVILYAMLAG LPF K+LL C RF +F  W+        +      +P   +    +D+P WFFP HFS+  ++LL+ L++PD   RLSV +A +H WVLD
Sbjct:  128 SPHYVAPEVLQDASGQGYDGAKADAWSIGVILYAMLAGKLPFGKDLLKCIRFDRFKKWSLQTKYDDDV-----EDPAQDVAATAVDFPEWFFPAHFSYDVKALLAQLMYPDPCLRLSVDEASKHRWVLD 251          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A329T0Y8_9STRA (Protein kinase domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A329T0Y8_9STRA)

HSP 1 Score: 145 bits (367), Expect = 7.810e-32
Identity = 187/712 (26.26%), Postives = 272/712 (38.20%), Query Frame = 2
Query:    2 SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLLAHCSGNPKDAMD--MDRLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGKLYSCSGGSSSDGSEFSTGAG----GIEDDPCAPDPQNIPSELLGADSDTEEEREERRDGLREWKEGGDAGGRRPGNGPVTQAPPVAVVA------APIGRRSDCGGS------ADKKGGGVTAAAAKAVNPSVLPKTTPLPAAAAAAGEPGDIRREDAAESSTEPDDTGLERGAPGAPALSAAASGERQASPPXXXXXXXXXXXXXXXXXXXXXXXPTETKEDAGRGETRPGE--SEQVGVLETRVPPAGERVIAGGKDGSGGVEVGGGSRNAKVEVVAAAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPSALLPAPPPLAPVDARQPFVTPRKLRSPRPLDVF---------SSPPLAPVGSGRAVEEDDSEFSLDPGPALPPEKGSTRSREGLPPSGPANARSRGANASAFPLGAVERQLSMGVAGMSMVEAEAENREGVVAAAPPAFHDLVKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLLGGEQRAAQYMVEFLRGQLDIFLFKRFYEDVRCKLND 2050
            SP+YVAPEVL + +G GYDG KAD WS+G+ILYAM+AGNLPF K+LL C R+ +F  W              S N K + D   D +++P+WFFP HFS   +SL++ +L+PDA  RL+V +A RH WV   KL       S D    S GA     G+   P AP P N+    +  ++         +DG+          G+      +    P A+        +P G    C  S       +K   GV          S +   TPL         P D +  D  E   E D + +                                               + TKE      +  G    ++  V E  V        +    G GGVE   GS +    ++   A V                                                       PPL    +R     P +LR   P ++F                VGS  +  +  +     P P LP        + G+P +                   +   L+   A     + +A   +   +  PP++ D+V RSTRF+T++PA +VL  I   +  +  PLPY Y  + Q   +  D+Y+LE+   G+L CTVQ++L    QR   Y+VEF RG +DIF FKRFYE +R ++++
Sbjct:  358 SPHYVAPEVLMD-AGQGYDGAKADAWSIGIILYAMIAGNLPFGKDLLKCVRYDRFRKW--------------SYNTKYSDDDPTDEVEFPTWFFPAHFSMELKSLIAQMLYPDACMRLAVEEAQRHTWVRGEKLKKPCPSMSEDDQLPSNGAALSTPGLP--PPAPHPTNMNHMNVAINT--------LQDGIEL--------GQHMHPSQLGSVSPQAITRLLAKSPSPHGHAFRCPPSPQQNLRVNKHLAGVVGYMPSVDETSSMSGQTPL-------SSPRDAKNNDNFELDREDDASMV-----------------------------------------------SSTKELNACNISEAGALFKQEALVREATVTTPMNLSASVATRGIGGVENVAGSAH----LLPQTATVQRHQHRFVS----------------------------------------------PPLV-TGSRD--TMPIRLRRNSPPELFLRGFARGHFRELSKGDVGSNTSGFDGINILGRSP-PLLPQSIVGHDDKPGVPINR-----------------TLTEPLTFSGAEAQSKDVQAGEEQQAASVPPPSYSDVVARSTRFLTALPARLVLSNIENALKTNPCPLPYEYPKVPQNVSIDWDNYQLEVRYAGLLTCTVQVFLF---QRGV-YLVEFRRGHVDIFQFKRFYEKIRAQISE 907          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A7S1CMK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMK9_9STRA)

HSP 1 Score: 144 bits (363), Expect = 2.030e-31
Identity = 84/165 (50.91%), Postives = 98/165 (59.39%), Query Frame = 2
Query:    2 SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLL-----AHCSGNPK--------------------------DAMDMDRLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGKLYS 403
            SP+YVAPEV+ +E GHGYDGTK D WS+GVILYAMLAGNLPF K+LL C RF KF    R   AT+S L     A  +G  +                          DA D D  DYP WFFP H S +A+SL++GLLHP+   RLSV  AL HPWVL+G L S
Sbjct:  468 SPHYVAPEVV-QEVGHGYDGTKVDAWSIGVILYAMLAGNLPFGKDLLACPRFHKFSQLMR--DATSSRLRAAARAAAAGVGRLRTLTEEXXXXXXXXXXXXXGGAYGDDASDED--DYPEWFFPPHISQSAKSLVAGLLHPEPEHRLSVNAALTHPWVLEGGLGS 627          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A6A4ZCA8_9STRA (Protein kinase domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZCA8_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.140e-31
Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 2
Query:    2 SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMDRLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLD 388
            SP+YVAPEVL++ SG GYDG KAD WS+GVILYAMLAG LPF K+LL C RF +F  W+        +      +P   +    +D+P WFFP HFS+  ++LL+ L++PD   RLSV +A +H WVLD
Sbjct:  248 SPHYVAPEVLQDASGQGYDGAKADAWSIGVILYAMLAGKLPFGKDLLKCIRFDRFKKWSLQTKYDDDV-----EDPAHDVAATAVDFPEWFFPAHFSYDVKALLAQLMYPDPCLRLSVDEASKHRWVLD 371          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A485KX19_9STRA (Aste57867_12474 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KX19_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.890e-31
Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 2
Query:    2 SPYYVAPEVLREESGHGYDGTKADVWSMGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLLAHCSGNPKDAMDMD-----RLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWVLDGK 394
            SP+YVAPEVL +++G GYDG KAD WS+G+ILYAMLAGNLPF KELL C R+ KF  W+           +   N  D  D+D      +++P WFFP HFS+  +SL++ L++PD   RLSV +A++H WVL G+
Sbjct:  313 SPHYVAPEVL-QDTGQGYDGAKADAWSIGIILYAMLAGNLPFGKELLKCLRYEKFKKWSY----------NTKYNDDDGCDVDPANDQAVEFPDWFFPPHFSYDVKSLIAQLIYPDPCLRLSVDEAIKHRWVLGGR 437          
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Match: A0A836CC79_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC79_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.250e-31
Identity = 78/133 (58.65%), Postives = 91/133 (68.42%), Query Frame = 2
Query: 1739 VKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDDYKLEIMRGGVLVCTVQIYLL------------------GGEQRAA---QYMVEFLRGQLDIFLFKRFYEDVRCKLNDLVKKDYSL 2074
            V RS+RF T+VPA  VLRK++ IIN D HPLPYPY+ I QKAVVH  D++LE+MRGGVLVCTVQIYL+                  GG Q  +    YMVEFLRGQ+DIFLFKR YE VR +L+ LVK DY L
Sbjct:  938 VARSSRFTTNVPATEVLRKVSAIINEDPHPLPYPYQKITQKAVVHWRDFRLEVMRGGVLVCTVQIYLMRPAAAQGRQYDKEVLSCGGGGQGGSCTGLYMVEFLRGQIDIFLFKRLYEGVRKQLSTLVKHDYRL 1070          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig840.17414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQG7_ECTSI6.860e-23965.72Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K1K0_9PHAE1.100e-23766.85Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2RX62_9STRA3.970e-3558.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A662Y892_9STRA2.140e-3326.32Protein kinase domain-containing protein n=2 Tax=N... [more]
A0A397A1G4_9STRA4.500e-3251.16Protein kinase domain-containing protein n=3 Tax=A... [more]
A0A329T0Y8_9STRA7.810e-3226.26Protein kinase domain-containing protein n=13 Tax=... [more]
A0A7S1CMK9_9STRA2.030e-3150.91Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6A4ZCA8_9STRA3.140e-3151.16Protein kinase domain-containing protein n=3 Tax=A... [more]
A0A485KX19_9STRA3.890e-3150.00Aste57867_12474 protein n=1 Tax=Aphanomyces stella... [more]
A0A836CC79_9STRA5.250e-3158.65Protein kinase domain-containing protein n=1 Tax=T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig840contigL-elsbetiae_contig840:9202..15100 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score141.0
Seed ortholog evalue2.1e-30
Seed eggNOG ortholog36331.EPrPI00000015810
KEGG koko:K08796
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Serine threonine protein kinase. Source PGD
EggNOG OGs1MEPX@121069,KOG0583@1,KOG0583@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03036,ko04131
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-10_005570.1
Exons7
Model size3273
Cds size2052
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816922.7854145-UTR-L-elsbetiae_contig840:9201..92261622816922.7854145-UTR-L-elsbetiae_contig840:9201..9226Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig840 9202..9226 +
1691683915.0148637-UTR-L-elsbetiae_contig840:9201..92261691683915.0148637-UTR-L-elsbetiae_contig840:9201..9226Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig840 9202..9226 +
1622816922.7985373-UTR-L-elsbetiae_contig840:9847..99041622816922.7985373-UTR-L-elsbetiae_contig840:9847..9904Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig840 9848..9904 +
1691683915.037393-UTR-L-elsbetiae_contig840:9847..99041691683915.037393-UTR-L-elsbetiae_contig840:9847..9904Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig840 9848..9904 +
1622816922.8763986-UTR-L-elsbetiae_contig840:13961..151001622816922.8763986-UTR-L-elsbetiae_contig840:13961..15100Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig840 13962..15100 +
1691683915.1140563-UTR-L-elsbetiae_contig840:13961..151001691683915.1140563-UTR-L-elsbetiae_contig840:13961..15100Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig840 13962..15100 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816922.8088343-CDS-L-elsbetiae_contig840:9904..100741622816922.8088343-CDS-L-elsbetiae_contig840:9904..10074Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 9905..10074 +
1691683915.0504692-CDS-L-elsbetiae_contig840:9904..100741691683915.0504692-CDS-L-elsbetiae_contig840:9904..10074Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 9905..10074 +
1622816922.8224158-CDS-L-elsbetiae_contig840:10579..106881622816922.8224158-CDS-L-elsbetiae_contig840:10579..10688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 10580..10688 +
1691683915.0663779-CDS-L-elsbetiae_contig840:10579..106881691683915.0663779-CDS-L-elsbetiae_contig840:10579..10688Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 10580..10688 +
1622816922.8348851-CDS-L-elsbetiae_contig840:11330..127381622816922.8348851-CDS-L-elsbetiae_contig840:11330..12738Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 11331..12738 +
1691683915.0761914-CDS-L-elsbetiae_contig840:11330..127381691683915.0761914-CDS-L-elsbetiae_contig840:11330..12738Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 11331..12738 +
1622816922.8453388-CDS-L-elsbetiae_contig840:13026..131511622816922.8453388-CDS-L-elsbetiae_contig840:13026..13151Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 13027..13151 +
1691683915.0849988-CDS-L-elsbetiae_contig840:13026..131511691683915.0849988-CDS-L-elsbetiae_contig840:13026..13151Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 13027..13151 +
1622816922.8566585-CDS-L-elsbetiae_contig840:13339..134381622816922.8566585-CDS-L-elsbetiae_contig840:13339..13438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 13340..13438 +
1691683915.0941226-CDS-L-elsbetiae_contig840:13339..134381691683915.0941226-CDS-L-elsbetiae_contig840:13339..13438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 13340..13438 +
1622816922.8661916-CDS-L-elsbetiae_contig840:13820..139611622816922.8661916-CDS-L-elsbetiae_contig840:13820..13961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 13821..13961 +
1691683915.1038013-CDS-L-elsbetiae_contig840:13820..139611691683915.1038013-CDS-L-elsbetiae_contig840:13820..13961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig840 13821..13961 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig840.17414.1prot_L-elsbetiae_contig840.17414.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig840 9905..13961 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig840.17414.1

>prot_L-elsbetiae_contig840.17414.1 ID=prot_L-elsbetiae_contig840.17414.1|Name=mRNA_L-elsbetiae_contig840.17414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=684bp
MGVILYAMLAGNLPFEKELLTCSRFAKFGAWARMPSATASLLAHCSGNPK
DAMDMDRLDYPSWFFPQHFSFAARSLLSGLLHPDASCRLSVRQALRHPWV
LDGKLYSCSGGSSSDGSEFSTGAGGIEDDPCAPDPQNIPSELLGADSDTE
EEREERRDGLREWKEGGDAGGRRPGNGPVTQAPPVAVVAAPIGRRSDCGG
SADKKGGGVTAAAAKAVNPSVLPKTTPLPAAAAAAGEPGDIRREDAAESS
TEPDDTGLERGAPGAPALSAAASGERQASPPRPAPPAPPPPANGGSLSSK
SSTSPTETKEDAGRGETRPGESEQVGVLETRVPPAGERVIAGGKDGSGGV
EVGGGSRNAKVEVVAAAAAVAEAAAAVAEAAAEEAAAAKEAAADMAAMKA
AAVVAAVTAAAKTAQSSPSALLPAPPPLAPVDARQPFVTPRKLRSPRPLD
VFSSPPLAPVGSGRAVEEDDSEFSLDPGPALPPEKGSTRSREGLPPSGPA
NARSRGANASAFPLGAVERQLSMGVAGMSMVEAEAENREGVVAAAPPAFH
DLVKRSTRFMTSVPAAVVLRKIATIINADAHPLPYPYRNIKQKAVVHQDD
YKLEIMRGGVLVCTVQIYLLGGEQRAAQYMVEFLRGQLDIFLFKRFYEDV
RCKLNDLVKKDYSLALLESGTCTHRFRRFSNLA*
back to top

mRNA from alignment at L-elsbetiae_contig840:9202..15100+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig840.17414.1 ID=mRNA_L-elsbetiae_contig840.17414.1|Name=mRNA_L-elsbetiae_contig840.17414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5899bp|location=Sequence derived from alignment at L-elsbetiae_contig840:9202..15100+ (Laminarionema elsbetiae ELsaHSoW15)
GTCTCCGTACTATGTTGCTCCCGAGGTGAGGGGATGGCAGTGACGTCCTC AGAGTTGTCGCTTTTGTGGAATGTCGAAGGGTTCGACCGGCTTTTCCTGT GTCTGGGTGGGGTCGAGGAAGTTCGTTTCTCTGCTGTGTTTGTACACGTA CCTGCCGCTGGCTTCGTGCGTGGAGAATGCGCTGAGATGTGCGCGACAGC GGTAGTTAAGCGCCGGAGAGGTTGAGGGCACAAAAAAAACACTTCCCGAG TATGCGTATGAGCGTGACAGGGCAGGTGCCGAGGAACCACTGTTTGTTGG CATGTGATACTCTGCTCGCCACTGGGTGGGAGGTGGAGAGTACCGAGATT GTTTGATGTTCCTTGTTTTCATGACAGTGTCCATACAATCGGTGTTTGGC TTACGCTGCTTGATACCGGCCGACGCGCACCAGGAGATTGCTGACGGTTT CTCTGTCGAAGTTTGGCTTCGATAAAAACCCTGCGCCCCGTCGAGCGTTC TCTGTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTGCTGTAATACTTGCTGATTTCCACGATTTGCTTTT TTTTTGTGCGGGTGTCGTGTGCCGCGTGCCGTGTTCCCGGCACCAGGTTC TCCGGGAGGAAAGCGGGCACGGGTACGACGGGACGAAGGCGGACGTGTGG TCCATGGGCGTGATCCTGTACGCGATGCTCGCGGGCAACCTCCCGTTCGA GAAGGAGCTCCTGACGTGCTCCCGCTTCGCCAAGTTCGGCGCGTGGGCTC GCATGCCGTCCGCGACGGCGTCGCTGCTTGCTCACTGCTCGGGGAACCCG AAAGACGCGATGGACATGGACCGGTGAGTGCGCTTGTTTGCTTTTTGAAA ATATTAATATTTGTTCTGAGTAAAGGTTTATCGTAAGAGCGGTCTGCGTC CGTCCGACATGGGAGAAAAGCTGTTCCGTTGGGATGCTGCTGCACATGGG ACGCACCAGGCCGACGAACCCTCGCTCGCCGTCTCAGGCTACAGCAGTGG TGTAAATCCGCAATCGTTAAGAGTGTCTAGTTTTGTGGAGTGTTTGTTTG GAGGGTTACTTTTTTTTTTGGGGGGGGGGGACGATGGTCTGTGCCATGTT GGAGCGAGCGCTCTTTTTTTCTGCTTTTTTTTTCTTTGGCGCCTGGCAGG CAAAGGTGTGCGCTTCCTTCCCCACGGTAGTTCGAGGTCGATGCGGCGAT GGTTGGTTGCCGGTTGCGGAGAAAGCGTGCTGTCGGTCTTGACACTGTTG CTGTTCCCCCCTCCCTTTTGCCCGCCACGCGTCTCTCCGCCTGCCCCTGC CCCTCGTTTCGTCTCTTTGCTCCAACAGCCTGGACTACCCGTCGTGGTTT TTCCCGCAACATTTCAGCTTTGCGGCCAGGTCTCTGCTCTCCGGGTTGCT GCATCCCGATGCTTCCTGCAGGCTCTCCGTTCGACAGGCGAGTTTGCTGT GTTGTTTCTCACATTAGGTCTCTACATCGTCCAAAAACATCCATGGGGGC CCCGTGGTCACAAAACACTTAAGGGGGGCACACTCGACGCCGCGGAAAGA AAAACAAAACAAACGCCTGGTACATAACGCGCCAGGCGATACTAGACTGA CGCACCAAAAAGAAAAAAACGTAAGGTAGGGTACATACCACTCGTGTGCA TTAAATAGTTGTATGATAGCGGTCTCTTGGAGACGGACGATGAGAAAGGC GGGAAATCGTGACTTGTTAGTTTTTTTGTTTTTGGGGGCGGGTGGGGGGG GTTGTTGAAAACAGCAATATATTATCGCGGTATGTACGGACGTATCTAGT TACTCCCCTTGTGTGAGGGGGCGGTGGAGCAATTAGCACTCACGTTGATC GGCTTGACCAGATACCATATTTAGCACCGGGTTGGCCAATCAACAAGCGC CGAAGGCAAGATGCTGGCGTTACTGGCCGACGGATTAAATAAGAAACGCC GACTGATTGAAGCACCGGGTTCGTTGTGCCTTCGTGCGGAATCAAATCTG AGTCTGAAGGTCCTTTCCCTTTCGCCCTTCGGCAAAACCCCGCCGCCCAT CCCGGTATGCCTCACAAACCTCACATCAGGCTCTGCGCCACCCGTGGGTC TTAGACGGGAAGCTCTACTCCTGTTCCGGCGGCAGCAGCAGCGACGGCAG CGAGTTCAGCACGGGCGCGGGGGGCATCGAGGACGACCCGTGCGCCCCCG ATCCCCAGAACATCCCGTCGGAGCTGCTGGGAGCCGATTCGGACACGGAA GAGGAGCGGGAGGAGAGGCGGGACGGGTTGCGCGAGTGGAAAGAGGGCGG CGACGCGGGAGGGCGGCGCCCCGGTAACGGCCCGGTGACGCAAGCGCCGC CGGTGGCTGTTGTCGCCGCGCCGATCGGTAGGAGGAGCGACTGCGGAGGC AGCGCCGACAAGAAGGGGGGTGGGGTTACTGCGGCTGCCGCGAAGGCGGT AAACCCCTCGGTTTTGCCGAAAACGACGCCGCTCCCGGCGGCGGCGGCGG CCGCCGGTGAACCCGGGGATATCAGGAGGGAAGATGCGGCGGAATCGAGC ACTGAGCCCGACGACACGGGTCTCGAGCGGGGAGCTCCGGGGGCACCGGC GTTGTCAGCGGCGGCGAGTGGAGAGCGGCAGGCATCGCCGCCGAGGCCAG CCCCGCCTGCACCACCACCACCCGCGAACGGCGGCTCCTTGTCTTCTAAG TCGTCGACGTCACCAACTGAGACCAAGGAGGATGCGGGCCGGGGGGAGAC GCGCCCGGGAGAAAGCGAGCAAGTAGGTGTATTGGAAACGAGGGTGCCGC CGGCGGGCGAACGGGTAATCGCCGGAGGGAAGGACGGTAGCGGAGGGGTT GAAGTCGGAGGCGGGAGTAGGAACGCGAAGGTGGAGGTGGTGGCGGCGGC GGCTGCGGTGGCGGAAGCAGCGGCTGCGGTGGCGGAGGCGGCGGCCGAAG AAGCTGCGGCGGCGAAAGAAGCCGCGGCCGATATGGCCGCGATGAAGGCG GCCGCTGTCGTGGCCGCCGTAACCGCCGCGGCAAAGACAGCTCAGTCGTC ACCGTCGGCGCTGTTGCCGGCCCCGCCGCCGCTTGCCCCGGTGGACGCGA GGCAGCCGTTCGTGACGCCGCGGAAACTGCGCTCGCCGCGGCCTCTCGAC GTGTTTTCATCCCCGCCCTTAGCACCTGTAGGTTCAGGTCGGGCGGTGGA GGAAGACGACTCGGAGTTCTCGCTCGACCCCGGACCGGCGCTGCCGCCAG AAAAGGGGAGTACCAGGAGCAGGGAAGGACTGCCTCCTTCAGGTCCCGCA AACGCGAGGTCAAGAGGCGCGAACGCCTCTGCTTTCCCGCTGGGCGCGGT GGAGCGGCAGCTCAGTATGGGTGTGGCGGGGATGTCTATGGTGGAAGCAG AGGCGGAGAATAGAGAAGGTGTGGTTGCGGCTGCTCCCCCCGCTTTCCAT GATCTGGTGAAGCGGTCGACGAGGTTCATGACATCAGGTGCGAAACTGTT GGTGTGGGAATGAGACTTGAGCGCTGAACGCGGAGTAGAGAGCAGTGGCG GAAGCATTTATCAGAATCAGTCATCACGTTTCCGTTGTTTATTTCGCCGC ACTTCTATCTGCTTGGGTAGTGTTGGTGAGATGGCTCATGGGCAGGATAC CCTCGAGCGTTCTTTGAAAGTACTGCGGTCGCCCCCTTGTTGCTCCGGTC ACCTCTTGTTGACATGCCTAGTTTTTACTCGCCGTTTCTCCTCCTTTTTT GCTGCGCTACGCAAAAACAATGCAGTGCCGGCGGCGGTGGTTCTTCGCAA AATTGCCACGATCATCAACGCGGATGCGCACCCGCTCCCGTACCCGTACC GCAACATAAAGCAGAAGGCTGTCGTGCACCAGGACGACTACAAGCTAGAG GTGGGTACGCGACAGCATGAGCAGCACCCTCCTTCGGCTGCAAGCGTAGT AGGCGTGGGAGACGAACTGTTGTCATCGTAGTTTGGATCTGGATTGCACA CGTTTTCGCCACAAGCATCACTTCCCATGTCCACGCCAAATATGTTTGCC TCAGCTTTGACCGACCACGCTTTCCGTTGTGCGCACAGATCATGCGAGGA GGGGTGTTAGTGTGCACGGTACAGATCTATCTGCTGGGCGGCGAGCAGCG GGCGGCGCAGTACATGGTGGAGTTCCTCAGAGGCCAGGTACGGCGTATTT GTGACTCGCGGTTTGCTTCGGGGTTCATTTGTGCTTCCCACGCCTCTCTG TTTCCGTTGTGGTTGTCCGCCTGTATATATGCTTACAGCTGCTGAACGGT TGTGTGTTGGTGTTTGCTGCTCCGCTCGTTCTTGCTTTGAAACTTGTGCC TCCGCGACCCTGTATTGTTACTCTACATCAGAGGATTATCGCACATTTTG CATTTTGTAGCTCGCGCATCCTGCACTACAGCTTTGACAGCATTGGTGGG CATCGGCTTGACTGGTAACTCCTCTTACCGCTCCCCTCTCCCAACTCCGC CCCTGCTACCCTTTTACCGACGTGTTGCTCGCTCACTTTTTCCGACATGG ACTCCTCCGCTTTCGGCAGCTGGATATCTTCTTGTTCAAGCGTTTCTATG AGGACGTTCGGTGCAAGCTGAACGACCTGGTCAAGAAGGACTACAGCCTG GCCCTGCTGGAATCGGGCACCTGCACACACCGATTCCGTCGATTTTCGAA CCTCGCATGAATGATAGAAACACTTTTGAACTCATCCCGCTCCTCGTCCC CCATCCACCCTAGCTGCTGGCATATCTAGCTGTTGTTTTGGGCGCCCAAT GCCTGTGCCTGGTTAAATGGTACTGTGGTATGAGTTGTCGTTGTGTGCGC TCGGCAAAAAAGGGGTCCGATGGGCGGGGTAAATAGCATAGTACAAAGAT TCAGGGCAATTTTTTGTGCCTTTTTTGTTCCGAGGTCGCAAATGGCAATT TAGAAATAGGAAAAGCTGCCACTTCTTACCACCTTTTGTCCATTTGGTGC CATGGCAGCAGGGTAAGTTCATAACGACTTGGTTGCTGTACCGTACCGTA CCGCGGAGCACTTTGCCGCTTGTATTGTTTGTGCCCGCTCCGTTAGGTCT GCCTGCACGCGGGCCACAATTAGCGGTGCCGTCGCGAGACTGTTGTGGTG TAATTGTAACGGAGGGGTATGTCGTCCATCGTCCGAGACCAGCTGGCCTC GTGTCTTGTGTTGCTCCTGGTATTCGTCCAAGCGTTGCCAGGGCGTTTGT CGAAGCGAGGCGGGTTATTGTGTTTTGGTCAACGGAGGGGCAGACTACTG GCCATCCAGAGTCGATCGACATGGTGCAGTCGTCTCCATCCCAACGACAG ATCTCCATGCCTGGAATGTTTTTTATTTCATAGCTCGCTTGTGTTGCCCT TCCCCCCCCGTCGGTCGTTCAATTTTGTTGGGATGAGGTGTGAGGCAGCT GTGGGGTCAATCTTCTGTGTAAATATAGCACACAGCACGTGCTGGCGCTG GGGGGCGGAGGAGGTCATGGTAGCAAGGTGTTCGCTTAGTTGGTATGTGT GTAATGTTGTCGTGTGTTTTCAACTAGCTGCTCTTGCTTGTTCTAGTCTT GATTGCAGGTGAAGCGAGGCAAGGTCGTCGAGCCAATTGCTGCGTACAGT GAATGTGTAACGTGGTGAAACTTTTTTTTGTGTCATGGACCTCTAAATAC ATTGAATGGGCGCCTCGGGTATGACTTTTGGTGCCGCGCCAGCTCTTAAT GCCTGTATCCAGCGAGCGGCGTCGCAGCATCGAGCACACACGAGCAACCT TCGGGTTAGTTTTTTATTTTAATTTTTTCGTCGTCATATTTATTTCCAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig840:9202..15100+

>mRNA_L-elsbetiae_contig840.17414.1 ID=mRNA_L-elsbetiae_contig840.17414.1|Name=mRNA_L-elsbetiae_contig840.17414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4104bp|location=Sequence derived from alignment at L-elsbetiae_contig840:9202..15100+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGTGATCCTGTACGCGATGCTCGCGGGCAACCTCCCGTTCGAGAA
GGAGCTCCTGACGTGCTCCCGCTTCGCCAAGTTCGGCGCGTGGGCTCGCA
TGCCGTCCGCGACGGCGTCGCTGCTTGCTCACTGCTCGGGGAACCCGAAA
GACGCGATGGACATGGACCGATGGGCGTGATCCTGTACGCGATGCTCGCG
GGCAACCTCCCGTTCGAGAAGGAGCTCCTGACGTGCTCCCGCTTCGCCAA
GTTCGGCGCGTGGGCTCGCATGCCGTCCGCGACGGCGTCGCTGCTTGCTC
ACTGCTCGGGGAACCCGAAAGACGCGATGGACATGGACCGCCTGGACTAC
CCGTCGTGGTTTTTCCCGCAACATTTCAGCTTTGCGGCCAGGTCTCTGCT
CTCCGGGTTGCTGCATCCCGATGCTTCCTGCAGGCTCTCCGTTCGACAGC
CTGGACTACCCGTCGTGGTTTTTCCCGCAACATTTCAGCTTTGCGGCCAG
GTCTCTGCTCTCCGGGTTGCTGCATCCCGATGCTTCCTGCAGGCTCTCCG
TTCGACAGGCTCTGCGCCACCCGTGGGTCTTAGACGGGAAGCTCTACTCC
TGTTCCGGCGGCAGCAGCAGCGACGGCAGCGAGTTCAGCACGGGCGCGGG
GGGCATCGAGGACGACCCGTGCGCCCCCGATCCCCAGAACATCCCGTCGG
AGCTGCTGGGAGCCGATTCGGACACGGAAGAGGAGCGGGAGGAGAGGCGG
GACGGGTTGCGCGAGTGGAAAGAGGGCGGCGACGCGGGAGGGCGGCGCCC
CGGTAACGGCCCGGTGACGCAAGCGCCGCCGGTGGCTGTTGTCGCCGCGC
CGATCGGTAGGAGGAGCGACTGCGGAGGCAGCGCCGACAAGAAGGGGGGT
GGGGTTACTGCGGCTGCCGCGAAGGCGGTAAACCCCTCGGTTTTGCCGAA
AACGACGCCGCTCCCGGCGGCGGCGGCGGCCGCCGGTGAACCCGGGGATA
TCAGGAGGGAAGATGCGGCGGAATCGAGCACTGAGCCCGACGACACGGGT
CTCGAGCGGGGAGCTCCGGGGGCACCGGCGTTGTCAGCGGCGGCGAGTGG
AGAGCGGCAGGCATCGCCGCCGAGGCCAGCCCCGCCTGCACCACCACCAC
CCGCGAACGGCGGCTCCTTGTCTTCTAAGTCGTCGACGTCACCAACTGAG
ACCAAGGAGGATGCGGGCCGGGGGGAGACGCGCCCGGGAGAAAGCGAGCA
AGTAGGTGTATTGGAAACGAGGGTGCCGCCGGCGGGCGAACGGGTAATCG
CCGGAGGGAAGGACGGTAGCGGAGGGGTTGAAGTCGGAGGCGGGAGTAGG
AACGCGAAGGTGGAGGTGGTGGCGGCGGCGGCTGCGGTGGCGGAAGCAGC
GGCTGCGGTGGCGGAGGCGGCGGCCGAAGAAGCTGCGGCGGCGAAAGAAG
CCGCGGCCGATATGGCCGCGATGAAGGCGGCCGCTGTCGTGGCCGCCGTA
ACCGCCGCGGCAAAGACAGCTCAGTCGTCACCGTCGGCGCTGTTGCCGGC
CCCGCCGCCGCTTGCCCCGGTGGACGCGAGGCAGCCGTTCGTGACGCCGC
GGAAACTGCGCTCGCCGCGGCCTCTCGACGTGTTTTCATCCCCGCCCTTA
GCACCTGTAGGTTCAGGTCGGGCGGTGGAGGAAGACGACTCGGAGTTCTC
GCTCGACCCCGGACCGGCGCTGCCGCCAGAAAAGGGGAGTACCAGGAGCA
GGGAAGGACTGCCTCCTTCAGGTCCCGCAAACGCGAGGTCAAGAGGCGCG
AACGCCTCTGCTTTCCCGCTGGGCGCGGTGGAGCGGCAGCTCAGTATGGG
TGTGGCGGGGATGTCTATGGTGGAAGCAGAGGCGGAGAATAGAGAAGGTG
TGGTTGCGGCTGCTCCCCCCGCTTTCCATGATCTGGTGAAGCGGTCGACG
AGGTTCATGACATCAGGCTCTGCGCCACCCGTGGGTCTTAGACGGGAAGC
TCTACTCCTGTTCCGGCGGCAGCAGCAGCGACGGCAGCGAGTTCAGCACG
GGCGCGGGGGGCATCGAGGACGACCCGTGCGCCCCCGATCCCCAGAACAT
CCCGTCGGAGCTGCTGGGAGCCGATTCGGACACGGAAGAGGAGCGGGAGG
AGAGGCGGGACGGGTTGCGCGAGTGGAAAGAGGGCGGCGACGCGGGAGGG
CGGCGCCCCGGTAACGGCCCGGTGACGCAAGCGCCGCCGGTGGCTGTTGT
CGCCGCGCCGATCGGTAGGAGGAGCGACTGCGGAGGCAGCGCCGACAAGA
AGGGGGGTGGGGTTACTGCGGCTGCCGCGAAGGCGGTAAACCCCTCGGTT
TTGCCGAAAACGACGCCGCTCCCGGCGGCGGCGGCGGCCGCCGGTGAACC
CGGGGATATCAGGAGGGAAGATGCGGCGGAATCGAGCACTGAGCCCGACG
ACACGGGTCTCGAGCGGGGAGCTCCGGGGGCACCGGCGTTGTCAGCGGCG
GCGAGTGGAGAGCGGCAGGCATCGCCGCCGAGGCCAGCCCCGCCTGCACC
ACCACCACCCGCGAACGGCGGCTCCTTGTCTTCTAAGTCGTCGACGTCAC
CAACTGAGACCAAGGAGGATGCGGGCCGGGGGGAGACGCGCCCGGGAGAA
AGCGAGCAAGTAGGTGTATTGGAAACGAGGGTGCCGCCGGCGGGCGAACG
GGTAATCGCCGGAGGGAAGGACGGTAGCGGAGGGGTTGAAGTCGGAGGCG
GGAGTAGGAACGCGAAGGTGGAGGTGGTGGCGGCGGCGGCTGCGGTGGCG
GAAGCAGCGGCTGCGGTGGCGGAGGCGGCGGCCGAAGAAGCTGCGGCGGC
GAAAGAAGCCGCGGCCGATATGGCCGCGATGAAGGCGGCCGCTGTCGTGG
CCGCCGTAACCGCCGCGGCAAAGACAGCTCAGTCGTCACCGTCGGCGCTG
TTGCCGGCCCCGCCGCCGCTTGCCCCGGTGGACGCGAGGCAGCCGTTCGT
GACGCCGCGGAAACTGCGCTCGCCGCGGCCTCTCGACGTGTTTTCATCCC
CGCCCTTAGCACCTGTAGGTTCAGGTCGGGCGGTGGAGGAAGACGACTCG
GAGTTCTCGCTCGACCCCGGACCGGCGCTGCCGCCAGAAAAGGGGAGTAC
CAGGAGCAGGGAAGGACTGCCTCCTTCAGGTCCCGCAAACGCGAGGTCAA
GAGGCGCGAACGCCTCTGCTTTCCCGCTGGGCGCGGTGGAGCGGCAGCTC
AGTATGGGTGTGGCGGGGATGTCTATGGTGGAAGCAGAGGCGGAGAATAG
AGAAGGTGTGGTTGCGGCTGCTCCCCCCGCTTTCCATGATCTGGTGAAGC
GGTCGACGAGGTTCATGACATCAGTGCCGGCGGCGGTGGTTCTTCGCAAA
ATTGCCACGATCATCAACGCGGATGCGCACCCGCTCCCGTACCCGTACCG
CAACATAAAGCAGAAGGCTGTCGTGCACCAGGACGACTACAAGCTAGAGT
GCCGGCGGCGGTGGTTCTTCGCAAAATTGCCACGATCATCAACGCGGATG
CGCACCCGCTCCCGTACCCGTACCGCAACATAAAGCAGAAGGCTGTCGTG
CACCAGGACGACTACAAGCTAGAGATCATGCGAGGAGGGGTGTTAGTGTG
CACGGTACAGATCTATCTGCTGGGCGGCGAGCAGCGGGCGGCGCAGTACA
TGGTGGAGTTCCTCAGAGGCCAGATCATGCGAGGAGGGGTGTTAGTGTGC
ACGGTACAGATCTATCTGCTGGGCGGCGAGCAGCGGGCGGCGCAGTACAT
GGTGGAGTTCCTCAGAGGCCAGCTGGATATCTTCTTGTTCAAGCGTTTCT
ATGAGGACGTTCGGTGCAAGCTGAACGACCTGGTCAAGAAGGACTACAGC
CTGGCCCTGCTGGAATCGGGCACCTGCACACACCGATTCCGTCGATTTTC
GAACCTCGCATGACTGGATATCTTCTTGTTCAAGCGTTTCTATGAGGACG
TTCGGTGCAAGCTGAACGACCTGGTCAAGAAGGACTACAGCCTGGCCCTG
CTGGAATCGGGCACCTGCACACACCGATTCCGTCGATTTTCGAACCTCGC
ATGA
back to top