prot_L-elsbetiae_contig8392.17396.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8392.17396.1
Unique Nameprot_L-elsbetiae_contig8392.17396.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length528
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8392.17396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 135..392
e-value: 4.6E-10
score: 40.4
IPR008615FNIPPFAMPF05725FNIPcoord: 126..167
e-value: 2.8E-7
score: 30.6
coord: 258..300
e-value: 6.5E-8
score: 32.6
coord: 214..256
e-value: 8.2E-6
score: 25.9
coord: 171..212
e-value: 1.3E-6
score: 28.4
coord: 346..387
e-value: 1.2E-7
score: 31.8
coord: 38..79
e-value: 2.9E-6
score: 27.3
coord: 434..476
e-value: 1.7E-5
score: 24.9
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 179..393
coord: 3..174
coord: 334..505
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 72..511

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8392contigL-elsbetiae_contig8392:4014..5597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8392.17396.1mRNA_L-elsbetiae_contig8392.17396.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8392 3806..6543 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8392.17396.1 ID=prot_L-elsbetiae_contig8392.17396.1|Name=mRNA_L-elsbetiae_contig8392.17396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=528bp
MWPASLRKLSFGASFNQPIAGVVWPTSLQQLAFWGGRFNQPIVGVVWPAS
LQQLTFGKNFKNPIAGVVWPASLQQLSFGFAFNQPITEVVWPASLQELTF
CGWFDRSIDGVVWPASLQQLSFGFSFNQPIEGVIWPASLQHLTFGAAFNH
LIADVVWPTSLQELTFGASLNQPIVGVVWPASLQKLSFGYDFNKPIAGVV
WPASLQQLTFSGKFNQPILGVVWPASLQQLSFGNNFDHSINGVVWPDSLQ
QLSLGSSFNQPIAGVVWPASVQKLHLGRSFNQLIAGVVWPDSLQQLSFGE
NFNQHIVGVVWPAHLQRLAFESGFNTPIAGAAWPASLQQLSFGHWFNQPI
AGVEWPASLEQLSFGRSFNQPVAGITWPASLELLSFGEMFDQPVNGVVWP
ASLTELRFGDCFDHPIAGVDWPASLRKLSFGKMFDQPITRVVWPDALQQL
LFGDRFNQRIGGIMWPASLEHLSFGRCFKQSIGGYPWPPDLVWPASLRSL
TLAGYNTLERIREYRKMDAFMKGSIWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP