prot_L-elsbetiae_contig8391.17393.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8391.17393.1
Unique Nameprot_L-elsbetiae_contig8391.17393.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length197
Homology
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BLAST of mRNA_L-elsbetiae_contig8391.17393.1 vs. uniprot
Match: D7FXM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM6_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 7.880e-47
Identity = 115/196 (58.67%), Postives = 126/196 (64.29%), Query Frame = 0 
Query:    2 EVSRLLRSWFGLDEFLCLHEAASPTSPSSSPSSRGASRLSLEQLLSTGVVAAEGRRRCGAVLAVGW-PDGSHHHSRGRXXXXXXXXXXGHDHHQGVSVKGYATLPPAGDNXXXXXXXEIGAAWTRRAETVRLESQASSSAVPRSPFRRRWSLEAFGDLLEDKALSAWGPRRGAGGRLEASARYTWERLLYDGRVLG 196
            E   LLRSWFG  + LCLHEAA+  + SS       + LSLEQLLSTGV+A E RR CGAVLA+   P G  +  RGR               +GVSVKGYATL P G            A WTRRAETVRLES+ASS  VPRS    R SLEA G+LL DKALSAWG RRG GGRLEASARYTWER L+DGRVLG
Sbjct:  151 EAWHLLRSWFGFGDLLCLHEAATKPASSSRSGDGAGTGLSLEQLLSTGVMAMEDRR-CGAVLAMQQQPGGDGNGRRGRGSRDSASR-------RGVSVKGYATLSPTGH-----------ADWTRRAETVRLESEASS-VVPRS----RLSLEALGELLTDKALSAWG-RRGYGGRLEASARYTWERRLFDGRVLG 321
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BLAST of mRNA_L-elsbetiae_contig8391.17393.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.390e-43
Identity = 112/192 (58.33%), Postives = 122/192 (63.54%), Query Frame = 0 
Query:    6 LLRSWFGLDEFLCLHEAASPTSPSSSPSSRGASRLSLEQLLSTGVVAAEGRRRCGAVLAVGW-PDGSHHHSRGRXXXXXXXXXXGHDHHQGVSVKGYATLPPAGDNXXXXXXXEIGAAWTRRAETVRLESQASSSAVPRSPFRRRWSLEAFGDLLEDKALSAWGPRRGAGGRLEASARYTWERLLYDGRVLG 196
            LLRSWFG  + LCLHEAA+  + SS       + LSLEQLLSTGV+A E RR CGAVLA+   P G     RGR               +GVSVKGYATL P G            A WTRRAETV LES+ASS A+PRS    R SLEA G+LL DKALSAWG R G GG LEASARYTWER LYDGRVLG
Sbjct:  154 LLRSWFGFGDLLCLHEAATNPASSSRSGDGAGTVLSLEQLLSTGVMAMEDRR-CGAVLAMQQQPGGDGDGRRGRCSRDSASR-------RGVSVKGYATLSPIGH-----------ADWTRRAETVCLESEASS-AIPRS----RLSLEALGELLTDKALSAWG-RWGYGGLLEASARYTWERRLYDGRVLG 320
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8391.17393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXM6_ECTSI7.880e-4758.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3A9_9PHAE1.390e-4358.33Rab3 GTPase-activating protein catalytic subunit n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8391contigL-elsbetiae_contig8391:263..4204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8391.17393.1mRNA_L-elsbetiae_contig8391.17393.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8391 261..4204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8391.17393.1 ID=prot_L-elsbetiae_contig8391.17393.1|Name=mRNA_L-elsbetiae_contig8391.17393.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp
EEVSRLLRSWFGLDEFLCLHEAASPTSPSSSPSSRGASRLSLEQLLSTGV
VAAEGRRRCGAVLAVGWPDGSHHHSRGRHHHHGHRKRRGHDHHQGVSVKG
YATLPPAGDNGGGGGGGEIGAAWTRRAETVRLESQASSSAVPRSPFRRRW
SLEAFGDLLEDKALSAWGPRRGAGGRLEASARYTWERLLYDGRVLGV
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