prot_L-elsbetiae_contig8389.17388.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig8389.17388.1
Unique Nameprot_L-elsbetiae_contig8389.17388.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length155
Homology
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BLAST of mRNA_L-elsbetiae_contig8389.17388.1 vs. uniprot
Match: D8LRQ5_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ5_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 9.770e-30
Identity = 66/97 (68.04%), Postives = 74/97 (76.29%), Query Frame = 0 
Query:   60 VSGREPYPGRSAPRTLQVPGVPPGQRSTAVMYC-EGAPAGTP-TLTPKSGWLPFAQEKGLVAPRTSHDDVVLDVKVTELPTKTLLSGRRDGAVKIWK 154
            VSGREP+PGR +PRTLQVPG  PG +ST V+Y  E  P  TP +L  ++G      EKGLVAPR+SHDD VLDVKVTELPTK LLSG RDGAVKIWK
Sbjct: 1364 VSGREPFPGRPSPRTLQVPGPAPGGKSTVVLYFDEDPPPPTPASLASRTGSPAVTLEKGLVAPRSSHDDAVLDVKVTELPTKMLLSGSRDGAVKIWK 1460
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8389.17388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRQ5_ECTSI9.770e-3068.04Non-specific serine/threonine protein kinase n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 121..154
score: 10.508
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 121..154
score: 10.153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig8389contigL-elsbetiae_contig8389:5336..7349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig8389.17388.1mRNA_L-elsbetiae_contig8389.17388.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig8389 4823..7424 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig8389.17388.1 ID=prot_L-elsbetiae_contig8389.17388.1|Name=mRNA_L-elsbetiae_contig8389.17388.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
MWSSVTGLSCGTSVLVVESSYPKEALPPLAGFDRERDGVVNIANNPGQVD
EHLLPTSSQVSGREPYPGRSAPRTLQVPGVPPGQRSTAVMYCEGAPAGTP
TLTPKSGWLPFAQEKGLVAPRTSHDDVVLDVKVTELPTKTLLSGRRDGAV
KIWK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR017986WD40_repeat_dom