prot_L-elsbetiae_contig12044.1729.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12044.1729.1
Unique Nameprot_L-elsbetiae_contig12044.1729.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length195
Homology
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BLAST of mRNA_L-elsbetiae_contig12044.1729.1 vs. uniprot
Match: D8LMW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMW6_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 5.430e-69
Identity = 123/149 (82.55%), Postives = 132/149 (88.59%), Query Frame = 0 
Query:    1 TDAGAGG-VVDGSSSVAALGLGNGDFLYVKSDSAARSAAKAKLEALERMKAAA-GAKASGSKFVPFPDHARPPPPRATKRIKNWQDLEAMQAQTFSLKPQKDSNAKKISVEESAMDDFVGYLKQTGLGKHRCALLFGRVSPTTNGIKVE 147
            TDA AG    DG++SVAALGLGNGDFLYVKSDSAAR+AAKAK +AL RMKAA  G K  GSKFVPFP HARPPPPRATKR+K WQD+EAMQAQTFSLKPQKDSN KKISVE+SAMDDFVGYLKQTGL KHRCALLFGRVSP+TNG+K E
Sbjct:  124 TDASAGSSTADGATSVAALGLGNGDFLYVKSDSAARAAAKAKSDALGRMKAAVVGDKTGGSKFVPFPQHARPPPPRATKRVKTWQDIEAMQAQTFSLKPQKDSNVKKISVEQSAMDDFVGYLKQTGLRKHRCALLFGRVSPSTNGVKRE 272
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12044.1729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMW6_ECTSI5.430e-6982.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availablePANTHERPTHR12710NUCLEAR PROTEIN LOCALIZATION 4coord: 88..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12044contigL-elsbetiae_contig12044:2992..5295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12044.1729.1mRNA_L-elsbetiae_contig12044.1729.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12044 2992..5297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12044.1729.1 ID=prot_L-elsbetiae_contig12044.1729.1|Name=mRNA_L-elsbetiae_contig12044.1729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
TDAGAGGVVDGSSSVAALGLGNGDFLYVKSDSAARSAAKAKLEALERMKA
AAGAKASGSKFVPFPDHARPPPPRATKRIKNWQDLEAMQAQTFSLKPQKD
SNAKKISVEESAMDDFVGYLKQTGLGKHRCALLFGRVSPTTNGIKVEAMY
EPPQKQQQQQQQPGGGGTYDSSALTEAARVAVAAAAAAQDENGGG
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