mRNA_L-elsbetiae_contig12026.1719.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: D7FYD4_ECTSI (STI1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD4_ECTSI) HSP 1 Score: 221 bits (563), Expect = 2.390e-66 Identity = 126/224 (56.25%), Postives = 143/224 (63.84%), Query Frame = 3
Query: 3 GVAKMRVSEIKAELDVRGIGYAGVFEKVCT*YTHT*VYMCASGHDICMYVHARHRCFFLFFPHPHHLCTTNSIA*GIRKTLPAWWRYERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEEMQKDPETAELLQKLEKAMGGIMP 674
GVAKMR SEIKAELD+RG+GY G+FEK ELV++L+EAR LGRA+PS+IDDFNKENLE +MDP+RAA FA+DLL++EKLKD+TAADGTLPGGMTPEMLSKMVSNPELMVLMQN KLQEIMKKVMA GP AMEE+Q DPETAELL+KLE AMGG+ P
Sbjct: 92 GVAKMRASEIKAELDMRGVGYTGIFEK---------------------------------------------------------------------DELVERLIEARSLGRADPSIIDDFNKENLENRMDPERAAGFADDLLNEEKLKDLTAADGTLPGGMTPEMLSKMVSNPELMVLMQNPKLQEIMKKVMADGPEAMEELQGDPETAELLKKLEAAMGGMQP 246
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: A0A7S2UTT4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTT4_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.320e-26 Identity = 81/222 (36.49%), Postives = 107/222 (48.20%), Query Frame = 3
Query: 6 VAKMRVSEIKAELDVRGIGYAGVFEKVCT*YTHT*VYMCASGHDICMYVHARHRCFFLFFPHPHHLCTTNSIA*GIRKTLPAWWRYERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKM--DPDRAAAFAEDL--LDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEEMQKDPETAELLQKLEKAM 659
V +M+VSEIKAEL++R I +AGVFEK ELV L EAR GRA+PS++D FNK+ E ++ DPD A+ LD E+LKD +A DGTLPGG+TPE ++ +PE+M ++Q K+QE+MKKVMA GP+AM M DPE ++ KL AM
Sbjct: 60 VGEMKVSEIKAELELRKISWAGVFEKE---------------------------------------------------------------------ELVRLLKEAREEGRADPSIVDQFNKQIFENRIQDDPDAASEKIPSPKDLDPEQLKDWSAGDGTLPGGLTPEAAQVLMRDPEIMAMLQMPKMQEVMKKVMAEGPSAMTSMMGDPEAMSMIMKLTAAM 212
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: A0A7S0INP6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0INP6_9EUKA) HSP 1 Score: 105 bits (261), Expect = 1.630e-22 Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 3
Query: 261 YERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEEMQKDPETAELLQKLEKAMGG 665
YE C E E +L AR GRA+P+LID+FN++ +ER D A + D + ++ A+DG LPGGM+PEML ++ PEL+ ++ N KLQE+MK VM GGP +E DPE E+L+K++ + G
Sbjct: 92 YEGCFEKE---EFARRLASARASGRADPTLIDEFNRQAVERAWTADGAGSSMPP--DFQAATEVVASDGGLPGGMSPEMLQSLMQKPELLAMLSNPKLQEVMKTVMEGGPDGAKEFMDDPEVREMLEKVQSMIRG 221
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: A0A7S1DB05_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DB05_CYCTE) HSP 1 Score: 99.8 bits (247), Expect = 1.780e-21 Identity = 57/139 (41.01%), Postives = 79/139 (56.83%), Query Frame = 3
Query: 261 YERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEE-MQKDPETAELLQKLEKAMGGIMP 674
Y+ C + S LV +L EAR G+ANP ++D FN+ LE +A L E + + A+DG LPGGM+P+ L ++ NPE+M LMQN KLQE MK +M GG ++ M DPE E+ QKL + + P
Sbjct: 7 YKDCFDKES---LVQRLKEARETGKANPDILDKFNRSKLEENFSEKKAE------LSDEAIDQVVASDGKLPGGMSPDTLKALIGNPEIMALMQNPKLQEAMKLMMTGGEEELQRAMSNDPELKEIAQKLSEIIMSTQP 136
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: A0A7S4MRL7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MRL7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.000e-20 Identity = 68/203 (33.50%), Postives = 93/203 (45.81%), Query Frame = 3
Query: 12 KMRVSEIKAELDVRGIGYAGVFEKVCT*YTHT*VYMCASGHDICMYVHARHRCFFLFFPHPHHLCTTNSIA*GIRKTLPAWWRYERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEE-MQKD 617
KMRVSE+KAELD+RG+ Y+G F+K L KL++AR G+ANP +IDDFNK L D A E + E ++ M DGTLPGG+ P+ML K++SNPEL L+Q+ K+QE M+ +M GG +A+E+ MQ+D
Sbjct: 98 KMRVSELKAELDLRGVDYSGCFDKE---------------------------------------------------------------------SLAAKLLQARATGKANPDIIDDFNKMRL------DETIAGEETSISDEDIQQMVGGDGTLPGGLPPDMLKKLMSNPELTSLLQSPKMQEAMRLMMTGGQSALEKAMQED 225
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: K0SQW9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQW9_THAOC) HSP 1 Score: 96.7 bits (239), Expect = 1.860e-19 Identity = 57/135 (42.22%), Postives = 90/135 (66.67%), Query Frame = 3
Query: 261 YERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEE-MQKDPETAELLQKLEKAMG 662
Y C + +S L ++L +AR GRA+ S+ID+FNK NLE + D ++D++DK TA DGTLPGGM PEML M+++P+L+ ++++ K+QEIMK VM+ G ++E+ M++D + E +Q+L + MG
Sbjct: 92 YVDCFDRQS---LEERLNDARSQGRADESIIDEFNKRNLEASVKGD-TFEVSDDMIDK-----ATAGDGTLPGGMPPEMLKSMMNDPDLVNMLRSPKMQEIMKIVMSEGQQSLEDRMKEDKDVYECVQRLNQIMG 217
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: A0A7S0XEQ7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEQ7_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.640e-19 Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 3
Query: 258 RYERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEEMQKDPETAELLQKLEKAM 659
+Y+ C +L+ +L E R G A+P+++ FN EN+ DP L DKE + + A DG LPGG++PE++ + S+PE+M +++N K+QE+MK VM GP ++ DP+ LLQ+L KAM
Sbjct: 16 KYDDCTNK---SQLLIRLNETRSKGIADPNILSKFNDENISEGFDPSL-------LNDKEIVSQVAAKDGNLPGGLSPELVKALTSDPEIMNMLRNPKMQEVMKAVMTQGPDGIKRYLSDPDAMILLQRLSKAM 139
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: A0A1Z5KT68_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KT68_FISSO) HSP 1 Score: 94.0 bits (232), Expect = 1.440e-18 Identity = 51/134 (38.06%), Postives = 82/134 (61.19%), Query Frame = 3
Query: 261 YERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEE-MQKDPETAELLQKLEKAM 659
Y C + S LV++L AR G A+PS+++ FN++ LE DP + D ++ A DGT+PGG+TP+M K+++NPELM ++Q+ K+QE M +M GG +E+ +++DPE E ++KL+ M
Sbjct: 86 YADCFDKES---LVERLQGARAKGLADPSILEKFNRQKLEADFDPSKKVEIQPDDIEA-----AVANDGTIPGGLTPDMFQKLIANPELMAMLQSTKMQEAMTLMMTGGRDELEKKLKEDPELQETVKKLDSIM 211
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: B8C8G9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8G9_THAPS) HSP 1 Score: 93.2 bits (230), Expect = 2.830e-18 Identity = 52/122 (42.62%), Postives = 78/122 (63.93%), Query Frame = 3
Query: 306 KLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEE-MQKDPETAELLQKLEKAMGGI 668
+L EAR G+A+PSLID+FN+ NLE + + A +++L+ DGTLPGG+ P+ML M+S+PEL+ ++++ K+QE+MK VM GG A+E+ M D E E + KL MG +
Sbjct: 99 RLNEARCSGKADPSLIDEFNRRNLEANVKGEDALEVTDNMLES-----AVGGDGTLPGGLPPDMLKSMMSDPELVNMLRSPKMQEVMKLVMEGGQDALEDAMTNDKEAYECVTKLNSIMGNM 215
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Match: A0A7S2A2U0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2U0_TRICV) HSP 1 Score: 92.4 bits (228), Expect = 7.620e-18 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 3
Query: 258 RYERCREIRS*GELVDKLVEARGLGRANPSLIDDFNKENLERKMDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLMQNAKLQEIMKKVMAGGPAAMEE-MQKDPETAELLQKLEKAM 659
RY C + S L +L+EAR GRA+PS++D FN++ E +D + L++ DGTLPGGM P+ML K++SNPELM L+Q+ K+QE MK +M G A+E+ M +D E E++ KL K M
Sbjct: 110 RYADCFDRES---LEGRLLEARSTGRADPSIVDAFNQKGGE-----------GPPQIDDDVLQNAVGGDGTLPGGMPPDMLKKLMSNPELMGLLQSPKMQEGMKLMMTEGQEALEKAMAEDRELYEVIMKLNKVM 230 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12026.1719.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12026.1719.1 >prot_L-elsbetiae_contig12026.1719.1 ID=prot_L-elsbetiae_contig12026.1719.1|Name=mRNA_L-elsbetiae_contig12026.1719.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp MDPDRAAAFAEDLLDKEKLKDMTAADGTLPGGMTPEMLSKMVSNPELMVLback to top mRNA from alignment at L-elsbetiae_contig12026:2..2824- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12026.1719.1 ID=mRNA_L-elsbetiae_contig12026.1719.1|Name=mRNA_L-elsbetiae_contig12026.1719.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2823bp|location=Sequence derived from alignment at L-elsbetiae_contig12026:2..2824- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12026:2..2824- >mRNA_L-elsbetiae_contig12026.1719.1 ID=mRNA_L-elsbetiae_contig12026.1719.1|Name=mRNA_L-elsbetiae_contig12026.1719.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=582bp|location=Sequence derived from alignment at L-elsbetiae_contig12026:2..2824- (Laminarionema elsbetiae ELsaHSoW15)back to top |