prot_L-elsbetiae_contig1012.173.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1012.173.1
Unique Nameprot_L-elsbetiae_contig1012.173.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length145
Homology
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BLAST of mRNA_L-elsbetiae_contig1012.173.1 vs. uniprot
Match: A0A6H5K9B1_9PHAE (Peptidase S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 6.560e-9
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:   34 PMKIRTGTGHPSWRKT-------PGAAQDDMLASISNMKEFEGKSHEELRLEDYCKNRRTSL 88
            P + R GTG+P+WR+T          A   ML SIS MKE+EGKSHEELR+EDY  NR+ SL
Sbjct:  208 PAQQRQGTGNPAWRETRAEDPTGKAGANPGMLQSISAMKEYEGKSHEELRVEDYLLNRKNSL 269
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1012.173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9B1_9PHAE6.560e-954.84Peptidase S59 domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.2360coord: 46..85
e-value: 4.9E-10
score: 41.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1012contigL-elsbetiae_contig1012:26416..27292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1012.173.1mRNA_L-elsbetiae_contig1012.173.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1012 26414..27292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1012.173.1 ID=prot_L-elsbetiae_contig1012.173.1|Name=mRNA_L-elsbetiae_contig1012.173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
GGSWEKGRFGAAEEKGVLVVPFKPENSGKLSEGPMKIRTGTGHPSWRKTP
GAAQDDMLASISNMKEFEGKSHEELRLEDYCKNRRTSLNALPKPESSSSP
FIPPSAATAAANATATNTATWEVDQSTQSSNVKQRRHEQGNPVLT
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