mRNA_L-elsbetiae_contig12016.1714.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
|
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: A0A6H5JWD8_9PHAE (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD8_9PHAE) HSP 1 Score: 246 bits (627), Expect = 6.480e-77 Identity = 141/241 (58.51%), Postives = 166/241 (68.88%), Query Frame = 3
Query: 210 NSTAGDVTKKFGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLES---MPSCS-----RLLHVGCGTSGMGPKLAQEASLS-LHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLNFPEGSFDAIVDKGTLDALLCSSVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLLTGCDSPLKIGKGGRHEPWSRYFFKELEERGEGAGCTYFMYVMVK 905
+++A D+TKKFGDPSFWE +Y+ Q A FEWFL Y+ GL+EYLLP LES MPS RLLHVGCGTS +GPKLA+E +LS LHVTD D+SP+A+RLM++RHA L NY E DVLNL+FP FDA+VDKGTLDALLC S EDA MV+E+HRVL KGG YVQ+SAEDPE RL+LLT C S G PWSR FKEL E EG+ Y+MYV+VK
Sbjct: 49 DTSAEDMTKKFGDPSFWERKYTGP--------------QGHKA-FEWFLSYDRGLKEYLLPVLESLVMMPSSHSRESHRLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMQKRHAALGNYDCREGDVLNLDFPADRFDAVVDKGTLDALLCRSAEDALAMVSEVHRVLRKGGVYVQISAEDPEMRLELLTECGSSSCRG------PWSRSIFKELGE-SEGS-AAYYMYVLVK 266
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: D7FZ50_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ50_ECTSI) HSP 1 Score: 206 bits (523), Expect = 1.210e-62 Identity = 110/164 (67.07%), Postives = 127/164 (77.44%), Query Frame = 3
Query: 420 RLLHVGCGTSGMGPKLAQEASLS-LHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLNFPEGSFDAIVDKGTLDALLCSSVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLLTGCDSPLKIGKGGRHEPWSRYFFKELEERGEGAGCT-YFMYVMVK 905
RLLHVGCGTS +GPKLA+E +LS LHVTD D+SP+A+RLM++RHA L NY E DVLNL+FP G FDA+VDKGTLDALLC S EDA MV+E+HRVL KGG YVQ+SAEDPEARL+LLT C S G+G PWSR FKEL GE G T Y+MYV+VK
Sbjct: 12 RLLHVGCGTSEVGPKLAEEPALSSLHVTDIDSSPTAVRLMRKRHATLGNYECREGDVLNLDFPAGRFDAVVDKGTLDALLCRSAEDALAMVSEVHRVLRKGGVYVQISAEDPEARLELLTECGS--SSGRG----PWSRSIFKEL---GESKGSTAYYMYVLVK 166
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: A0A1Y1HM77_KLENI (S-adenosyl-L-methionine dependent methyltransferases n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HM77_KLENI) HSP 1 Score: 105 bits (261), Expect = 8.430e-23 Identity = 61/181 (33.70%), Postives = 97/181 (53.59%), Query Frame = 3
Query: 240 FGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLESMPSCSRLLHVGCGTSGMGPKLAQEASLSLHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLN-FPEGSFDAIVDKGTLDALLCS--SVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLL 773
+GD ++WE +Y Q ++ PFEW+ Y+G LR+ L ++ + +L +GCG S + +A++ +T+ D SP+ I+ MK +H DL AD ++ F GS DA++DKGTLDAL+C + E+ MV+E+ R+L GG Y+ VS +P R+ L
Sbjct: 24 YGDAAYWEHRY-----------------QHDVVPFEWYQKYDG-LRDLLKKYIHATAD---ILMLGCGNSALSEDMAKDGYYD--ITNVDISPTVIKAMKMKHLDLPQLKWVCADARSMTIFKSGSLDAVIDKGTLDALMCGDEATENVNSMVSEVFRLLRPGGVYLMVSYGEPTTRMPYL 181
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: A0A833VVD5_9POAL (Methyltransferase-like protein 13 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VVD5_9POAL) HSP 1 Score: 97.8 bits (242), Expect = 3.430e-20 Identity = 64/190 (33.68%), Postives = 101/190 (53.16%), Query Frame = 3
Query: 240 FGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLESMPSCSRLLHVGCGTSGMGPKLAQEASLSLHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLN-FPEGSFDAIVDKGTLDALLC--SSVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLLTGCDSPLKI 800
+GD +W+A+Y ++ G A PF+W+ Y LR +L F+ P+ SR+L +GCG S M + ++ + + D S I +MKQRH + T + DV ++ F + SFD IVDKGTLDALLC ++++ A +M+ E++RVL + G Y+ ++ P R+ L KI
Sbjct: 13 YGDAGYWDARYKTEK-----GGA----------PFDWYRSY-AALRPFLRHFV---PTSSRVLMLGCGNSLMSEDMVKDGYTE--IVNVDISSVVIDMMKQRHDHIPQLTYVQMDVRDMRLFSDRSFDCIVDKGTLDALLCGTNALQAASQMLGEVNRVLKQSGIYMLITYGAPSVRVQNLKQAGPSWKI 181
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: A0A0G4ED17_VITBC (Methyltransf_11 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ED17_VITBC) HSP 1 Score: 100 bits (248), Expect = 4.350e-20 Identity = 75/215 (34.88%), Postives = 103/215 (47.91%), Query Frame = 3
Query: 228 VTKKFGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLESMPSCSRLLHVGCGTSGMGPKLAQEASLSLHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLNFPEGSFDAIVDKGTLDALLC---SSVE---DAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLLTGCDSPLKIGKGGRHEPWSRYFFKELE 854
V + G+ ++W+ +Y S L A +E EW +E L+ L+ ++ S R+LHVGCG S MG LA E VT+ D SP+AI + K+RH LE D L P FD ++DKGTLDA++C SV + V EMHR+L GG YV VS P RL +L S + + G P+ + LE
Sbjct: 63 VEEALGEGNYWDRRYQS----------LSSASGEESGNHEWLRSWED-LQGLLVRYMSSE---DRILHVGCGQSDMGVCLAGEGFR--RVTNMDISPAAIEMQKERHPTLEWVVG---DGLRTGLPSDHFDVVIDKGTLDAIMCRGEGSVTWGWQGSQYVEEMHRILKPGGRYVAVSHGRPSRRLPVLR--PSNIDLDASGLKRPFPKTLDWTLE 256
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: A0A452Z1C2_AEGTS (Methyltransf_11 domain-containing protein n=6 Tax=Triticinae TaxID=1648030 RepID=A0A452Z1C2_AEGTS) HSP 1 Score: 96.3 bits (238), Expect = 7.250e-20 Identity = 60/184 (32.61%), Postives = 100/184 (54.35%), Query Frame = 3
Query: 234 KKFGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLES-MPSCSRLLHVGCGTSGMGPKLAQEASLSLHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLNF-PEGSFDAIVDKGTLDALLCS--SVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLL 773
K FG ++WEA+YSS S + + F+W+ Y L P L + +P+ SR+L +GCG S + + ++ + + + D S I MK++H D+ T + DV +++F +GSFD I+DKGTLDA++C + A +M+ E+ R++ GG Y+ ++ P+ RL LL
Sbjct: 9 KDFGAAAYWEARYSSPSTGGKXXXXXXF--------FDWYQSYSA-----LRPLLRACVPTSSRVLMLGCGNSLLSEDMVKDGYQN--IVNIDISSVVIEQMKEKHMDIPRLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAPHGAYKMLAEVARLMRPGGIYMLITYGAPKERLTLL 177
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: I7M351_TETTS (Kinase domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7M351_TETTS) HSP 1 Score: 95.1 bits (235), Expect = 1.810e-19 Identity = 56/183 (30.60%), Postives = 101/183 (55.19%), Query Frame = 3
Query: 234 KKFGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLESMPSCSRLLHVGCGTSGMGPKLAQEASLSLHVTDADNSPSAIRLMKQRHADL-ENYTASEADVLNLNFPEGSFDAIVDKGTLDALLC--SSVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLL 773
K++G+P +WE +Y+ E PF+W+ + G+R++++P + S++L+VG G+S + ++ E + +T+ D S + M++++ D N+ + DV N+ F SFD ++DKGTLD++LC SS +A + ++E++RVL+ G YV +S PE R L
Sbjct: 2 KQYGNPQYWEERYAK-----------------EPEPFDWYQRF-SGIRDHVIPHINPE---SKILNVGSGSSRLSEEMFDEGHQN--ITNIDISSIVTKSMQEKYKDKGPNFKYLQMDVRNMEFEAKSFDCVMDKGTLDSILCGESSTSNANKAISEIYRVLTPKGVYVLISHGSPEYRRTYL 161
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: N1QUG9_AEGTA (Methyltransferase-like protein 13 n=3 Tax=Aegilops tauschii TaxID=37682 RepID=N1QUG9_AEGTA) HSP 1 Score: 96.3 bits (238), Expect = 5.810e-19 Identity = 60/184 (32.61%), Postives = 100/184 (54.35%), Query Frame = 3
Query: 234 KKFGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLES-MPSCSRLLHVGCGTSGMGPKLAQEASLSLHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLNF-PEGSFDAIVDKGTLDALLCS--SVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLL 773
K FG ++WEA+YSS S + + F+W+ Y L P L + +P+ SR+L +GCG S + + ++ + + + D S I MK++H D+ T + DV +++F +GSFD I+DKGTLDA++C + A +M+ E+ R++ GG Y+ ++ P+ RL LL
Sbjct: 9 KDFGAAAYWEARYSSPSTGGKXXXXXXF--------FDWYQSYSA-----LRPLLRACVPTSSRVLMLGCGNSLLSEDMVKDGYQN--IVNIDISSVVIEQMKEKHMDIPRLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAPHGAYKMLAEVARLMRPGGIYMLITYGAPKERLTLL 177
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: A0A5J9T116_9POAL (Methyltransf_11 domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9T116_9POAL) HSP 1 Score: 94.4 bits (233), Expect = 6.670e-19 Identity = 60/188 (31.91%), Postives = 98/188 (52.13%), Query Frame = 3
Query: 222 GDVTKKFGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLES-MPSCSRLLHVGCGTSGMGPKLAQEASLSLHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLN-FPEGSFDAIVDKGTLDALLC--SSVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLL 773
G ++ +G+ +W+ +Y + E PF+W+ Y L P L + + RLL VGCG S G + + L V + D S I MK+++ D + DV N++ F GSFDA++DKGTLD+L+C +S E+A +M+ E++R+L++ G Y+ ++ DP RL +L
Sbjct: 6 GATSQAYGEAWYWDERY-----------------RKEAGPFDWYQKYPA-----LAPLLRLYVATHQRLLLVGCGNSVFGENMVDDGYLD--VVNIDISSVVIDQMKKKYQDKPQLKYMKMDVKNMSDFQSGSFDAVIDKGTLDSLMCGQNSQENATKMLEEVNRILTENGVYILITYGDPSYRLHIL 169
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Match: A0A6S7NQ95_LACSI (Methyltransf_11 domain-containing protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A6S7NQ95_LACSI) HSP 1 Score: 94.0 bits (232), Expect = 7.540e-19 Identity = 63/212 (29.72%), Postives = 106/212 (50.00%), Query Frame = 3
Query: 228 VTKKFGDPSFWEAQYSSQSLILRHGNALQYARQDELAPFEWFLPYEGGLREYLLPFLESMPSCSRLLHVGCGTSGMGPKLAQEASLSLHVTDADNSPSAIRLMKQRHADLENYTASEADVLNLN-FPEGSFDAIVDKGTLDALLC--SSVEDAREMVTEMHRVLSKGGAYVQVSAEDPEARLDLLTGCDS---------PLKIGKGGRHEPW 827
+T+ +G+ +W+ +Y+ +S F+W+ YE L L ++ R+L VGCG S ++ + + + + D S I M+++++D + E DV ++ F +GSFDA++DKGTLD+LLC +S +A +M+ E+ RVL KGG Y+ ++ P RL LL+ S L G+ +HE W
Sbjct: 1 MTQAYGEAWYWDKRYAKEST----------------GTFDWYQKYES-LAPLLHLYVPPTTIHRRILVVGCGNSSFSEGMSNDGYTN--IVNIDISSVVIEAMQKKYSDSPHLKYFEMDVTHMKAFEDGSFDAVIDKGTLDSLLCGHNSKTNAAKMLDEVERVLKKGGVYILITYGIPAYRLRLLSESHSWAIKLHVIDKLLPGECSKHETW 193 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12016.1714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12016.1714.1 >prot_L-elsbetiae_contig12016.1714.1 ID=prot_L-elsbetiae_contig12016.1714.1|Name=mRNA_L-elsbetiae_contig12016.1714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp MRRSATATAAVLVRSARMQRWPRGHQAGVIVAVMSSINEARGRGAGVSGAback to top mRNA from alignment at L-elsbetiae_contig12016:3548..5236- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12016.1714.1 ID=mRNA_L-elsbetiae_contig12016.1714.1|Name=mRNA_L-elsbetiae_contig12016.1714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1689bp|location=Sequence derived from alignment at L-elsbetiae_contig12016:3548..5236- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12016:3548..5236- >mRNA_L-elsbetiae_contig12016.1714.1 ID=mRNA_L-elsbetiae_contig12016.1714.1|Name=mRNA_L-elsbetiae_contig12016.1714.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig12016:3548..5236- (Laminarionema elsbetiae ELsaHSoW15)back to top |