mRNA_L-elsbetiae_contig12008.1709.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
|
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI) HSP 1 Score: 350 bits (897), Expect = 4.610e-110 Identity = 302/389 (77.63%), Postives = 313/389 (80.46%), Query Frame = 1
Query: 1 LCSPAVLKLEEGARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAA---GASDA-QGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQPSLAAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L SPAVLKLEEGARDG+L+QFYLSLADK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFH+RSAVLNAELPLNSRLHILQEFNRGIFDYLIVTD+SMDVQGVGGV EEDG + SV D A + AS A +GE S XXXXXXXXXXXXX XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R ++ EFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGG SGTALSLVL KDEKQCRTLQRVQSSQPSLAAP+L G XXXXX XXXXXXXXXXXXXXXXXX SWAQPAPLAFDIREIERFRYRVEDTLKKV
Sbjct: 251 LHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDDSMDVQGVGGVAVEEDGDDGDSVSDE-SVGGDAPAGSIRVSASVALEGEDAMDQ-----SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGHRGEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQSSQPSLAAPSLDGGXXXXXAPGSSGSIVTAMGPQAGGAVXXXXXXXXXXXXXXXXXX--SWAQPAPLAFDIREIERFRYRVEDTLKKV 631
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: A0A6H5KX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX88_9PHAE) HSP 1 Score: 263 bits (673), Expect = 8.370e-79 Identity = 221/357 (61.90%), Postives = 235/357 (65.83%), Query Frame = 1
Query: 1 LCSPAVLKLEEGARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHI-------------------------------------------------------LQEFNRGIFDYLIVTDNSMDVQGVGGVP-EEEDGXXXAVAAGRVSV-ATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQ 900
L SPAVLKLEEGARDG+L+QFYLSLADK DKFLVVFAFIKLGLLEGKGLFFVN+TESSYRLKLFLEQFH+RSAVLNAELPLNSRL ++EFNRGIFDYLIVTD+SMDVQGVGGV EE D +V+ V A G AS A E G+XXXXXXXXXXXXX G XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX R ++ EFGAARGVDFRGVSFVLNVDFPPT SSYTHRVGRTARGG SGTALSLVL KDEKQCRTLQRVQ ++
Sbjct: 260 LHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKAIPPFSPTMAIREFNRGIFDYLIVTDDSMDVQGVGGVAVEEADDDEDSVSEESVGGDAPAGSIRVSASVALQEGEDAMDQSSSEEGEXXXXXXXXXXXXXX-----------GKXXXXXXXXXXXXXXXXXXXXXTTGKADNXXXXXXXXXXGHRGEDSEFGAARGVDFRGVSFVLNVDFPPTASSYTHRVGRTARGGASGTALSLVLAKDEKQCRTLQRVQDAR 605
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.430e-63 Identity = 191/394 (48.48%), Postives = 211/394 (53.55%), Query Frame = 1
Query: 1 LCSPAVLKLEEG-----ARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQPSL----AAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L SPA+LKLEEG G L QF+L+L + DK LVVFAF+KLGLLEGKGLFFVN T++ YRLKLFLEQFHIRSAVLNAELPL SRLHIL+EFNRGIFDYLI TD SMDV G GG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K + E+G ARG+DFRGV FV+NVDFPP+ SYTHRVGRTARGG SGTALSL+ + + L VQ+SQP+L A LG S AQPAPLAFD+REIE+FRYRV D KKV
Sbjct: 217 LHSPAILKLEEGDASGGGEGGALLQFFLALREPADKNLVVFAFLKLGLLEGKGLFFVNATDACYRLKLFLEQFHIRSAVLNAELPLASRLHILEEFNRGIFDYLIATDESMDV-GSGGXXXXXX--------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAGGPKGDAEYGVARGIDFRGVKFVMNVDFPPSARSYTHRVGRTARGGASGTALSLLCERAPAEVAALAEVQASQPALPLTEADTLLGAIGTATADDGVSAQL--------------------------------SRAQPAPLAFDLREIEQFRYRVTDVAKKV 503
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: W7TVX7_9STRA (Putative atp-dependent rna helicase ddx56 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVX7_9STRA) HSP 1 Score: 207 bits (527), Expect = 9.300e-57 Identity = 174/385 (45.19%), Postives = 205/385 (53.25%), Query Frame = 1
Query: 1 LCSPAVLKLEEGARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQPSLAAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L SPAVLKLEEG DG+L QFY+SL + D K L+VF F+KLG+LEGKGLFFVN ++ YRLKLFLEQF IRSAVLNAELPLNSRLH LQEFNRGIFD+LI TD S+D G PE E+ XXX +GEXXXXXXXXXX XXXXXXXXXXXXX G + E E+G RG+DFR V+FV+NVDFP + +YTHR+GRTARGG +GTALSL+ D ++ L VQ+SQP+L P+ G QP PLAFD++E+E FRYRVED + V
Sbjct: 244 LHSPAVLKLEEGRTDGELLQFYVSLPEAD-KLLLVFVFLKLGVLEGKGLFFVNGLDACYRLKLFLEQFSIRSAVLNAELPLNSRLHTLQEFNRGIFDFLIATDESLDTA-CG--PESEEXXXX--------------------XEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAEVSAGRRG-------------------RRQSRGGGPAAGKEEGRPGEKEEEEDEKEYGVHRGIDFRAVNFVVNVDFPRSARAYTHRIGRTARGGANGTALSLLNKDDAREQEVLAAVQASQPALP-PSEGDTLADSLGPGGEVGATGALR-----------------------------TQPTPLAFDLKELEGFRYRVEDVRRAV 555
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: A0A7S4VQY4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VQY4_9STRA) HSP 1 Score: 197 bits (502), Expect = 2.190e-53 Identity = 160/392 (40.82%), Postives = 191/392 (48.72%), Query Frame = 1
Query: 1 LCSPAVLKLEE-------GARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQPSLAAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L SPAVLKLEE + L+QFYL++ KD K +V++ F+KLGLL+GKGLFFVN T+ YRLKLFLEQFHIRSAVLNAELPL SRL+I+++FN G FDYLI TD S DV XXXXXXXXXXXXXXXXXXXX K++ E+G +RG+DFRGVSFV+NVDFPP SYTHR+GRTARGG SG ALSLV + E+Q LQ+VQ SQP L + ++G AQP+PL FD+ E+E FRYRVED + V
Sbjct: 244 LHSPAVLKLEEEDELNANSSSKAALSQFYLTIPKKD-KNIVLYVFLKLGLLKGKGLFFVNTTDGGYRLKLFLEQFHIRSAVLNAELPLRSRLNIIEQFNIGNFDYLIATDESTDVNS-----------------------------------------------------------------------------------------------SKXXXXXXXXXXXXXXXXXXXXRGSKKDSEYGVSRGLDFRGVSFVVNVDFPPNSKSYTHRIGRTARGGASGVALSLVEAESEEQLEALQQVQESQPPLPSGSVG-------------VGGGGPSNGDLRTATGDDEDMSEDEEGKQSDKSQFLAQPSPLEFDLNELEGFRYRVEDVSRAV 526
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: A0A7S2VYS2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYS2_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.330e-53 Identity = 173/393 (44.02%), Postives = 197/393 (50.13%), Query Frame = 1
Query: 1 LCSPAVLKLEE--------GARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQPSLAAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L SPAVLKLEE +DG L QF+L L KD K LV++ F+KLGLL+GKGLFFVN T+ YRLKLFLEQFHIRSAVLNAELPL+SRL+I+++FN G FDYLI TD S DV G +ED XXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ E+G +RG+DFRGVSFV+NVDFPP+ SYTHR+GRTARGG SG ALSLV D +Q L RVQ SQP L G QP PL FD+ EIE FRYRVED + V
Sbjct: 213 LHSPAVLKLEEEDERAAGRNKKDGNLMQFFLRLPKKD-KNLVLYVFLKLGLLKGKGLFFVNTTDGGYRLKLFLEQFHIRSAVLNAELPLHSRLNIIKQFNVGNFDYLIATDESSDV--TAGADVDED---------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDSEYGVSRGLDFRGVSFVVNVDFPPSCQSYTHRIGRTARGGASGVALSLVNMDDTEQESMLSRVQESQPPLPLAGTSGNETLQAAPEIGTDEDDSGQMRHAQ----------------------QQVQPTPLDFDLAEIEGFRYRVEDVSRAV 499
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: A0A3M6VU95_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU95_9STRA) HSP 1 Score: 197 bits (500), Expect = 3.150e-53 Identity = 167/387 (43.15%), Postives = 208/387 (53.75%), Query Frame = 1
Query: 1 LCSPAVLKLEEGARDGKLAQFYLSL--ADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQPSLAAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L +PAV+KLEEGA DGKL QFYLS+ DKD L+++A ++LG++ GK +FFVN T+++YRLKLF EQF I+SAVLNA+LP NSR HI++EFNRG+FDYLI TD+S+D VG XXX + SDA E XXXX XXXXXXXXXXXXX D G+ XXXXXX R + +G +RGVDFRGV FV+NVD P +V +YTHR+GRTARGG SGTALSLV +D K+ R L+RVQ+ Q ++ + A AQPA LAFD++EI+ FRYRVED + V
Sbjct: 221 LHNPAVVKLEEGATDGKLQQFYLSVKAVDKD---LLLYALLRLGVVSGKVIFFVNSTDAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIEEFNRGLFDYLIATDDSVDRDEVGDEXXXXXXXXXXXXXXXXXXXXXXXXSDTDSDAVKEDVEEVEXXXXXXXXXXXXXXXXXXXXXESDKGEAVKNDNGADXXXXXXEKTTVSAKR-----------------------GRADDEGYGVSRGVDFRGVQFVINVDLPKSVRAYTHRIGRTARGGASGTALSLVCKEDPKEERALKRVQAKQQAVRSEA-----------------------------------------------NDVIAQPAELAFDLKEIDCFRYRVEDVRRAV 534
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: A0A5D6XSV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSV1_9STRA) HSP 1 Score: 194 bits (494), Expect = 1.480e-52 Identity = 186/388 (47.94%), Postives = 224/388 (57.73%), Query Frame = 1
Query: 1 LCSPAVLKLEEGARDGKLAQFYLSL--ADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQ-PSLAAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L +PAV+KLEEGA DGKL Q++L++ ADKD L+++A IKLG+++GK +FFVN TE++YRLKLF EQF I+SAVLNAELP NSR HI++EFNRG+FDYLI TD+S+D +G+ A DXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R ++ +G +RGVDFRGV+FV+NVDFP +V +YTHR+GRTARGG +GTALSLV D KQ R L RVQ+SQ P L A AQPA LAFD+ E++ FRYRVED + V
Sbjct: 224 LHNPAVVKLEEGATDGKLQQYFLAVPAADKD---LLLYALIKLGVVQGKVIFFVNSTEAAYRLKLFFEQFIIKSAVLNAELPHNSRQHIIEEFNRGLFDYLIATDDSVD--------------------------------------------------RDVGE-------------ASDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKRPRDEAYGVSRGVDFRGVNFVINVDFPKSVRAYTHRIGRTARGGANGTALSLVGRGDSKQARALARVQASQKPVLTATK------------------------------------------------DVLAQPAELAFDLAEVDCFRYRVEDVRRAV 497
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: A0A6A5AU38_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AU38_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.270e-51 Identity = 186/385 (48.31%), Postives = 226/385 (58.70%), Query Frame = 1
Query: 1 LCSPAVLKLEEGARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQPSLAAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L +PAV+KLEEG+ DGKL Q+YL +A K DK L+++A IKLG++ GK +FFVN T ++YRLKLF EQF I +AVLN++LP NSR HI+++FNRG+ DYLI TD+SMD +++GXXX XXXXXXXXXX +GD XXXXXXXXXXXX XXXX X XXXXXXXXXXXXX XXXXXXXXX R Q FG ARGVDFRGVSFV+NV+FP +V SYTHR+GRTARGG +GTA+SLV D + + L RVQS Q + + +QPAPLAFDI++I+ FRYRVED + V
Sbjct: 48 LHNPAVVKLEEGSSDGKLTQYYLPVA-KQDKDLLLYALIKLGIVHGKIIFFVNSTSAAYRLKLFFEQFLIPAAVLNSQLPHNSRQHIIEQFNRGLIDYLIATDDSMD---------KDEGXXXXX-----------------------XXXXXXXXXXXIGDDXXXXXXXXXXXXXXXXXXXIGXESXXXXXXXXXXXXXXXDLXXXXXXXXXDEGQAPLLKSKSSNSTRDQA--FGVARGVDFRGVSFVVNVEFPKSVKSYTHRIGRTARGGANGTAISLVATNDAAETKALTRVQSKQSPVVLES-----------------------------------------------QDVLSQPAPLAFDIKDIDCFRYRVEDVRRAV 350
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Match: A0A484DTQ8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTQ8_BRELC) HSP 1 Score: 192 bits (487), Expect = 2.050e-51 Identity = 148/385 (38.44%), Postives = 191/385 (49.61%), Query Frame = 1
Query: 1 LCSPAVLKLEEGARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFFVNDTESSYRLKLFLEQFHIRSAVLNAELPLNSRLHILQEFNRGIFDYLIVTDNSMDVQGVGGVPEEEDGXXXAVAAGRVSVATDGLAAAGASDAQGEXXXXXXXXXXSMGDXXXXXXXXXXXXXADDXXXXXXXXGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKQEPEFGAARGVDFRGVSFVLNVDFPPTVSSYTHRVGRTARGGNSGTALSLVLGKDEKQCRTLQRVQSSQPSLAAPALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWAQPAPLAFDIREIERFRYRVEDTLKKV 1155
L +PAV+KLEEGA DGKL QFYL + DK L+++A ++LG++ GK +FFVN T+++YRLKLF EQF I+SAVLNA+LP NSR HI++EFNRG+FDYLI TD+S+D XXX + +V DG ASD E ++ + XXX XXXXXX + + +G +RGVDFRGV FV+NVDFP +V +YTHR+GRTARGG SGTALSLV D + R L+RVQS Q ++ + QPA LAFD++EI+ FRYRVED + V
Sbjct: 221 LHNPAVVKLEEGATDGKLQQFYLPVKS-GDKDLLLYALLRLGVVSGKVIFFVNSTDAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIEEFNRGLFDYLIATDDSVDRDENXXXXXXXXXXXXXNKSTEDAVFDDGAEYDAASDLLDEEENKNDSKEYNITEVNGAVDVGEDXXXX------------------------------XXXXXXEDKVKKKTIKTVGAKRGQADDASYGVSRGVDFRGVQFVINVDFPKSVRTYTHRIGRTARGGASGTALSLVSKDDAMEERALKRVQSKQVAVRSET-----------------------------------------------NEVMTQPAELAFDLKEIDCFRYRVEDVRRAV 527 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12008.1709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12008.1709.1 >prot_L-elsbetiae_contig12008.1709.1 ID=prot_L-elsbetiae_contig12008.1709.1|Name=mRNA_L-elsbetiae_contig12008.1709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=385bp LCSPAVLKLEEGARDGKLAQFYLSLADKDDKFLVVFAFIKLGLLEGKGLFback to top mRNA from alignment at L-elsbetiae_contig12008:870..5728- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12008.1709.1 ID=mRNA_L-elsbetiae_contig12008.1709.1|Name=mRNA_L-elsbetiae_contig12008.1709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4859bp|location=Sequence derived from alignment at L-elsbetiae_contig12008:870..5728- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12008:870..5728- >mRNA_L-elsbetiae_contig12008.1709.1 ID=mRNA_L-elsbetiae_contig12008.1709.1|Name=mRNA_L-elsbetiae_contig12008.1709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2310bp|location=Sequence derived from alignment at L-elsbetiae_contig12008:870..5728- (Laminarionema elsbetiae ELsaHSoW15)back to top |