prot_L-elsbetiae_contig796.16925.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig796.16925.1
Unique Nameprot_L-elsbetiae_contig796.16925.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length280
Homology
BLAST of mRNA_L-elsbetiae_contig796.16925.1 vs. uniprot
Match: D7FXQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ2_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 9.730e-73
Identity = 147/290 (50.69%), Postives = 172/290 (59.31%), Query Frame = 0
Query:   17 MEEFLRILEVNFKGRKCYLGQYGSPTTAPEANE--------EDQHTKSGPAVGSVVVTLETALEKLVIGAFLGTGPGSEWEYWEGEFGTSELEAHRNSLGWDGHSLKTLGDCFLGAVDGT--PQLSQSQSCAVANEVAVDEHQQRPPEFSTTRD-----------------GGSDAGDDGSTGREGEELSAAVAGTLDLHYAGAGIVGSWDVRRVQSGVSAALMNSMQRSFRAACWRKSTDAVETLASSGSNAKTSSSSRPKSSGAHKAKRQRFAGKGATLIGATSSAEA 279
            M+E L  LE  FKGR+CYLGQY SP   P A E        +   + S P VGSV  TLE    +LV+GAFL  G G  WEYWEGEFG SEL +HR+SLGWDGHSL+ L DCF  AV+ T  P   +++ C+     A DEHQQRPPEFS+T                   GG   GDD   G        +  GTLDLHYA AGIVGSW+V RVQ+GVSAALM+SM RS R+AC R+  D  E  ASS  +A  +  SR K+SGA K KR+R A  GA L G   SAEA
Sbjct:   13 MQELLANLEARFKGRRCYLGQYVSPKPFPSAPESGGNGNASDSGSSGSSPVVGSVAATLEPP-NRLVLGAFLDRGLGQAWEYWEGEFGPSELASHRDSLGWDGHSLEALADCFACAVEATKLPPPEENRPCSEGALAAADEHQQRPPEFSSTAGVVETDRKGEEEPESGGVGGVGCGDDDGDG-------GSATGTLDLHYARAGIVGSWEVSRVQTGVSAALMHSMHRSIRSACGRQLADTAEAPASSSGSA-DAGLSRAKASGAPKFKRKRVAATGAKLAGVGPSAEA 293          
BLAST of mRNA_L-elsbetiae_contig796.16925.1 vs. uniprot
Match: A0A6H5KX18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX18_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 3.040e-71
Identity = 146/288 (50.69%), Postives = 175/288 (60.76%), Query Frame = 0
Query:   13 GKDE--MEEFLRILEVNFKGRKCYLGQYGSPTTAPE---------ANEEDQHTKSGPAVGSVVVTLETALEKLVIGAFLGTGPGSEWEYWEGEFGTSELEAHRNSLGWDGHSLKTLGDCFLGAVDGT--PQLSQSQSCAVANEVAVDEHQQRPPEFSTTRD------GGSDAGDDGSTGREGEELSA--AVAGTLDLHYAGAGIVGSWDVRRVQSGVSAALMNSMQRSFRAACWRKSTDAVETLASSGSNAKTSSSSRPKSSGAHKAKRQRFAGKGATLIGATSSAEA 279
            GK E  ++EFL  LE  FKG +CYLGQY SP   P          A++    + S P VGSVVVTLE    +LV+GA L  G G  WEYWEGEFG  EL +HR+SLGWDGHSL+ L DCF GAV+ T  P   +++ C+       DEHQQRPPEFS+T         G +  D G  G          +  GTLDLHYA AGIVGSW+V RVQ+GVS ALM+SM RS RAAC R+  D  +  ASS  +A  +  SR K+SGA K KR+R A  GA L GA+ SAEA
Sbjct:    7 GKHEGNIQEFLAKLEARFKGIRCYLGQYVSPKPFPSGPESGKSGNASDSGSSSSSNPVVGSVVVTLEPP-NRLVLGALLDRGLGQGWEYWEGEFGPLELASHRDSLGWDGHSLEALADCFAGAVEATKLPLPEENRPCSEGALAVADEHQQRPPEFSSTAGVVETDRTGEEEPDSGVGGXXXXXXXXXXSATGTLDLHYARAGIVGSWEVSRVQTGVSVALMHSMHRSIRAACGRQLADTAKPPASSSGSA-DAGLSRAKASGAPKFKRKRVAATGAKLAGASPSAEA 292          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig796.16925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXQ2_ECTSI9.730e-7350.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KX18_9PHAE3.040e-7150.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig796contigL-elsbetiae_contig796:10483..14549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig796.16925.1mRNA_L-elsbetiae_contig796.16925.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig796 10418..14871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig796.16925.1 ID=prot_L-elsbetiae_contig796.16925.1|Name=mRNA_L-elsbetiae_contig796.16925.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
MDGTAGNSSTRKGKDEMEEFLRILEVNFKGRKCYLGQYGSPTTAPEANEE
DQHTKSGPAVGSVVVTLETALEKLVIGAFLGTGPGSEWEYWEGEFGTSEL
EAHRNSLGWDGHSLKTLGDCFLGAVDGTPQLSQSQSCAVANEVAVDEHQQ
RPPEFSTTRDGGSDAGDDGSTGREGEELSAAVAGTLDLHYAGAGIVGSWD
VRRVQSGVSAALMNSMQRSFRAACWRKSTDAVETLASSGSNAKTSSSSRP
KSSGAHKAKRQRFAGKGATLIGATSSAEA*
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