mRNA_L-elsbetiae_contig796.16924.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: D7FLC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC2_ECTSI) HSP 1 Score: 287 bits (735), Expect = 2.150e-91 Identity = 153/215 (71.16%), Postives = 171/215 (79.53%), Query Frame = 2
Query: 35 MQSTCFSALVFVALLGACSSFILIPSLQATRPRHMFPSALPLPTRGQDKAVCKAT--NEGDDDGVDYSADPITAFLGKFLPSEKEKSKSPQAKDLVFNVGEEAKRRGMGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTETDGEDVVVRWRLSGRINLPFNPPIKPYVVTTTFERDID 673
M+S +AL +++LG C SF + P + RPRH P L P Q VCK+ +E + DGVDYSADPITAFLGKFLP EKS PQAKDLVFNVGE+AKRRGM A EMA+A+D LR NGWFVTGR+D+SLFS+ FFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTE DGED+VV WRLSGRINLPFNPPIKPY+VTTTFERD D
Sbjct: 1 MRSRDATALTVLSVLGVCHSFQVSP-ISPCRPRHA-PCPLLRPRCAQ--TVCKSAGKDEEEGDGVDYSADPITAFLGKFLPK-GEKSNPPQAKDLVFNVGEDAKRRGMAAGEMASALDEALRSNGWFVTGRIDSSLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSD 210
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A6H5JBW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW5_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.020e-57 Identity = 94/108 (87.04%), Postives = 99/108 (91.67%), Query Frame = 2
Query: 350 MGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTETDGEDVVVRWRLSGRINLPFNPPIKPYVVTTTFERDID 673
M A EMA+A+D LR NGWFVTGRVDASLFS+ FFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTE DGED+VV WRLSGRINLPFNPPIKPY+VTTTFERD D
Sbjct: 1 MAAGEMASALDEALRSNGWFVTGRVDASLFSEGFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTEVDGEDIVVNWRLSGRINLPFNPPIKPYIVTTTFERDSD 108
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A383W0Z3_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W0Z3_TETOB) HSP 1 Score: 135 bits (340), Expect = 4.720e-33 Identity = 75/150 (50.00%), Postives = 95/150 (63.33%), Query Frame = 2
Query: 233 ADPITAFLGKFLPSEKEKSKSPQAKDLVFNVGEEA-KRRGMGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTET--DGEDVVVRWRLSGRINLPFNPPIKPYVVTTTFERDID 673
+DP+ FLG+FLPS + AKD + + +A K G ++MA V+AGL + WFVTG VD LFSDSF F D V+ TG+ YA GV KLF+Q S+ ++IS E D + +VV WRL GR+NLPF P IKPYVVTTT D D
Sbjct: 42 SDPVNQFLGQFLPSNR------AAKDELAGIDFDAPKLSGRSIQQMAELVEAGLSRSQWFVTGEVDPRLFSDSFAFKDESVATTGIKAYATGVRKLFDQATSKVELISVEARPDTQALVVVWRLEGRVNLPFKPKIKPYVVTTTLGLDPD 185
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A250WW06_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WW06_9CHLO) HSP 1 Score: 131 bits (330), Expect = 3.670e-32 Identity = 70/149 (46.98%), Postives = 91/149 (61.07%), Query Frame = 2
Query: 233 ADPITAFLGKFLPSEKEKSKSPQAKDLVFNVGEEAKRRGMGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTETDGED--VVVRWRLSGRINLPFNPPIKPYVVTTTFERDID 673
+DP+ FLG FLPS +S A L K G+ +++A ++A L ++ WFVTG VD SLF+ F F D V+ G+ YAEGV K+F+QE SR +V+S +TD +VV WRL G +NLPF P I PYVVTTTFE D D
Sbjct: 15 SDPVNGFLGNFLPS----GESVSASSLDQIDWTTPKATGLEIRQLADRIEAKLSMSEWFVTGMVDPSLFAKEFSFKDDSVATKGIRSYAEGVRKIFDQETSRAEVVSVDTDAAKGIIVVTWRLEGCVNLPFKPRITPYVVTTTFEVDSD 159
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A7J7PWC3_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PWC3_9CHLO) HSP 1 Score: 132 bits (331), Expect = 1.340e-31 Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 2
Query: 233 ADPITAFLGKFLPSEKEKSKSPQAKDLVFNVG-EEAKRRGMGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTETDGED--VVVRWRLSGRINLPFNPPIKPYVVTTTFERD 667
+DP+ FLG+FLPS + AKD + V ++ K G +EMA V+AGL + WFVTG VD LFSDSF F D V+ TG+ YA GV KLF+Q S+ ++++ E D +VV WRL GR+NLPF P IK YVVTTT D
Sbjct: 63 SDPVNQFLGQFLPSNR------AAKDELVGVDFDQPKLSGRSIQEMAQLVEAGLSKSQWFVTGEVDPRLFSDSFAFKDESVATTGIKAYATGVRKLFDQATSKVELVTVEPQPADQAIVVTWRLEGRVNLPFKPKIKAYVVTTTLGVD 204
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A7S3ZJJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJJ4_9STRA) HSP 1 Score: 126 bits (316), Expect = 8.120e-30 Identity = 83/218 (38.07%), Postives = 117/218 (53.67%), Query Frame = 2
Query: 11 SEYIPLDTMQSTCFSALVFVALLGACS-SFILIPSLQATRPRHMFPSALPL-PTRGQDKAVCKATNEGDDDGVDYSADPITAFLGKFLPSEKEKSKSPQAKDLVFNVGEEAKRRGMGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTETDGEDVVVRWRLSGRINLPFNPPIKPYVVTTTF 658
+ YI + + C VF LG C+ + +L L+A A L PTR ++V + N G ++ DY +P+T FLG+F+P + + V + + + E+ A+D GLR WFVTG+V FSD F F DP VSLTG+ YAEGVA+LF E++RC+VI+ GE++ V WRLSG + + IKPYVV TTF
Sbjct: 10 ASYIAANIHHNCC----VFAVALGLCTHTSVLFRMLRAIAALLAASGAAGLVPTR---RSVARVINAGGEE--DY-VNPVTEFLGRFIPKQA---------PIELGVDWDQPKTPLPLGELVGALDRGLREREWFVTGKVLPEYFSDDFKFEDPDVSLTGIQNYAEGVARLFG-EDARCEVIACAPRGEEIAVDWRLSGSVRVGPGATIKPYVVHTTF 207
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A0G4I8F7_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I8F7_9ALVE) HSP 1 Score: 110 bits (276), Expect = 8.830e-24 Identity = 63/166 (37.95%), Postives = 98/166 (59.04%), Query Frame = 2
Query: 194 ATNEGDDDGVDYSADPITAFLGKFL---PSEKEKSKSPQAK---DLVFNVGEEAKRRGMGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVIST--ETDGEDVVVRWRLSGRINLPFNPPIKPYVVTTTFERD 667
+T+EG+ + + +P+T FLG F+ P + + Q K ++ F V +KR+ M +A ++ L+ + WFVTGRVD S FS++F F DP V + G++ YA+GV K+F+QE SR +VI T ++ + V WRL G++N+ IKPY+V T F D
Sbjct: 64 STSEGEGETSEEYVNPLTGFLGNFIQKKPVPESSERGNQNKPVGEIDFAV---SKRKKMPLNRLAQELEKALQRSEWFVTGRVDPSFFSENFSFEDPDVKVKGIEDYAKGVNKIFDQETSRAEVIETTVKSANNTITVTWRLEGKVNVGPGLRIKPYLVYTDFGVD 226
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A7S2KK02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KK02_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.920e-22 Identity = 78/238 (32.77%), Postives = 118/238 (49.58%), Query Frame = 2
Query: 20 IPLDTMQSTCFSALVFVALLGACSSFILIPSLQATRPRHMFPSALPLPTRGQDKAVCKATNE--GDDDGVDYS---ADPITAFLGKFLPSEKEKSK-SPQAKDLVFNVGEEAKRRGMGA--KEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVIS-------TETDGEDV-------------VVRWRLSGRINL-PFNPP-IKPYV 643
I + M + L+F L S+ P R + P K + AT + D+ +D A+P+T+FLG F+ S+ EK + + ++ + + + K + +EM +DAG+R N WFVTG+V + LF+D FFF DP V L G++KYA+GV +LF+Q SR +VIS T+T ++V V WRLSG +N+ PF IKPY+
Sbjct: 1 ITTNIMLIFSIALLIFTQCLNEVSTLSFKPPTTCAHSRMYGTTLGNSPEAIAYKTILYATTDPNNDEQNLDVGEIYANPLTSFLGNFIGSKDEKMEIGDKEQENIVQLDDFTKPKAFNLPIEEMVKRLDAGIRENEWFVTGKVMSELFADDFFFKDPDVQLRGIEKYADGVNRLFDQNTSRVEVISCELNPAITDTVNKEVGVSIDDDKFVQVVTVEWRLSGNVNIGPFGGLFIKPYI 238
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A6T8H729_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8H729_HEMAN) HSP 1 Score: 105 bits (262), Expect = 3.350e-22 Identity = 88/273 (32.23%), Postives = 118/273 (43.22%), Query Frame = 2
Query: 56 ALVFVALLGACSSFILIPSLQATRP-RHMFPSALPLPTRGQDKAVCKATNEGDDDGVDYSADPITAFLGKFLPSEK---EKSKSPQAKDLVFNVGEEAKRRGMGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEESRCDVISTETDGEDVV-VRWRLSGRINLPFNPPIKPYVVTTTFERDIDILPYRGEESRGLVSSLVSASPLIFCRTEEKSLAVW-LTHWSAHACGFFSRFSLLLLPLRPPP 856
A V++ LL A S I S A P H+ + RG + +GD ++Y DP+T L FLP K + KS + +N + K G+ +MA VD GLR WFVTG LF F F DP V G+++YA GV +LFNQE S V+ E ++ V+WRL G +N+ IKPYVV T E V LI + + S+ W L W+ F L P+ PPP
Sbjct: 2 AKVWILLLLASSCEISRTSAFAGGPFLHLNAKSRTFQLRGSQRGQEDGGGKGDK--LEYR-DPLTKVLANFLPGGKPGKSRDKSSAMDAIDWN---KPKSSGLSVDQMAARVDQGLRERAWFVTGEALPELFHPDFEFKDPNVKTKGIEEYARGVHRLFNQEASSMQVVECAVSSEKIIGVKWRLEGAVNVGPGLEIKPYVVYTDLE--------------------VGQDGLIIAQEDRFSIPAWELLIWA---------FLPFLRPMLPPP 239
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Match: A0A7S3Z129_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z129_9EUKA) HSP 1 Score: 103 bits (256), Expect = 5.910e-22 Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 2
Query: 329 EEAKRRGMGAKEMATAVDAGLRLNGWFVTGRVDASLFSDSFFFSDPQVSLTGVDKYAEGVAKLFNQEES--RCDVISTE-TDGEDVVVRWRLSGRINLPFNPPIKPYVVTTTF 658
E+ K G+ A EMA V+ GLR WFVTG VDA+LF+DSF FSDP VS + +++YA GV++ F Q ES R VI + T ++ V W L ++NLP P IKPY+V TT+
Sbjct: 16 EKPKVEGLTASEMAGRVEEGLRERSWFVTGLVDATLFADSFQFSDPSVSASSLEEYARGVSRFFTQGESGARMKVIYAKPTKPNEIQVCWWLDAQVNLPGKPRIKPYIVITTY 128 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig796.16924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig796.16924.1 >prot_L-elsbetiae_contig796.16924.1 ID=prot_L-elsbetiae_contig796.16924.1|Name=mRNA_L-elsbetiae_contig796.16924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=320bp MQSTCFSALVFVALLGACSSFILIPSLQATRPRHMFPSALPLPTRGQDKAback to top mRNA from alignment at L-elsbetiae_contig796:1848..4321- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig796.16924.1 ID=mRNA_L-elsbetiae_contig796.16924.1|Name=mRNA_L-elsbetiae_contig796.16924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2474bp|location=Sequence derived from alignment at L-elsbetiae_contig796:1848..4321- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig796:1848..4321- >mRNA_L-elsbetiae_contig796.16924.1 ID=mRNA_L-elsbetiae_contig796.16924.1|Name=mRNA_L-elsbetiae_contig796.16924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1920bp|location=Sequence derived from alignment at L-elsbetiae_contig796:1848..4321- (Laminarionema elsbetiae ELsaHSoW15)back to top |