prot_L-elsbetiae_contig7948.16915.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7948.16915.1
Unique Nameprot_L-elsbetiae_contig7948.16915.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length478
Homology
BLAST of mRNA_L-elsbetiae_contig7948.16915.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI)

HSP 1 Score: 511 bits (1317), Expect = 2.180e-161
Identity = 322/521 (61.80%), Postives = 362/521 (69.48%), Query Frame = 0
Query:    1 QWNKIVKGLKRMGSTKRGG----------------------GRGGPRGFESREASSF-----GDGGEDXXXXXXXXXXXXXXX---------DLAEWEVSRAGKREGDGRYVIQLRQPASGSFLLLGTDEPLVYEEWVEDILYVQQRTLALEWTKRFRAKMSKDPSPPLSAFKFLPDRDWNREWEAACSLTGGGRGGRDPRVTIALGQQFRAFAGAVAGAALRANVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------DIRGALSRATPDECSAFMVGNVAFVLAPRGPGSGYRTHKRLGAELKGAHVLRRAVERRVLSSVGGGGAGPDRVNALAPLSCVVDLHGFRAAAVALPAFKPRPESKPKLRPRPKLLGCEEGGKGEDEDDAGATMGRSGLVLEAVSALLGCARDSVAAAGMLSHGMDLFFCQEAASPPPLPSLGGXXXXXXXXXXXXXSGLVLGETPRSLDEGGATNERASGLAGRRIVGDAVVVLVGGGTAHGAAGSGDVDGDGE 478
            +WNKIVKGLKRMG ++RGG                      G     GF +R+ S F     G G  D       XXXXXXXX         DLAEWE+SR GKR GD RYV+QLRQP+SGSFLLLGT + L+YEEWVEDILYVQQRTLALEWT+RFR+KMSKD SPPLSAFK LPDRDWNREWEAACSLTGGGRGGRD RVTIALGQQFRAFAGAVAGAA+RA+++Q                                       D+R ALSR+TPD+C +F++GNVAFVLAPRGPG GY+THKRLGAELKGA VLRRAVERRVLS VG GGAGP+ VNALAPLSCVVDL+GFRAAAVALPAF PR +SK KLR RPKLLG +   +GE +    A   R+ LV+EAVSALL C R+SVA+A MLSHG+DL++ ++  +     +   XXXXXXXXXXXXX                 TNERASGLAGRRIVGDAVVVLVGGG  HGAAGSGDVDGDGE
Sbjct:  185 KWNKIVKGLKRMGPSRRGGKGXXXXXXSLGDGEGSATFDERGEETEEGFAARKVSLFDEEGRGGGRRDDRDSCYDXXXXXXXXXXXXXADDVDLAEWEISRVGKRAGDARYVVQLRQPSSGSFLLLGTTDALLYEEWVEDILYVQQRTLALEWTRRFRSKMSKDSSPPLSAFKLLPDRDWNREWEAACSLTGGGRGGRDARVTIALGQQFRAFAGAVAGAAMRASLRQRQQSSWPSPSQDEGWESLAPLRPMEAEDKANGGGDTHTGDVRAALSRSTPDDCWSFLMGNVAFVLAPRGPGGGYKTHKRLGAELKGAQVLRRAVERRVLSGVGSGGAGPELVNALAPLSCVVDLYGFRAAAVALPAFMPRTKSKQKLRARPKLLGGKIEKEGEGDGAGAAGTDRASLVVEAVSALLECGRESVASACMLSHGLDLYYNKDVEAEAGDGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGTNERASGLAGRRIVGDAVVVLVGGGMGHGAAGSGDVDGDGE 705          
BLAST of mRNA_L-elsbetiae_contig7948.16915.1 vs. uniprot
Match: A0A6H5L4V6_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V6_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 5.800e-130
Identity = 322/706 (45.61%), Postives = 364/706 (51.56%), Query Frame = 0
Query:    1 QWNKIVKGLKRMGSTKR----GGGRGGP------------------RGFESREASSFGDGGEDXXXXXXXXXXXXXXX-------------DLAEWEVSRAGKREGDGRYVIQLRQPASGSFLLLGTDEPLVYEEWVEDILYVQQRTLALEWTKRFRAKMSKDPSPPLSAFKFLPDRDWNREWEAACSLTGGGRGGRDPRVTIALGQQFRAFAGAVAGAALRANVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-----IRGALSRATPDECSAFMVGNVAFVLAPRGPGSGYRTHKRLGAELKGAHVLRRAVERRVLSSVGGGGAGPDRVNALAPLSCVVDLHGFRAAAVALPAFKPRPESKPKLRPRPKLLGC--------------------------------------------------------------EEG---------------------------------GKG-----------------------ED--------EDDAG-------------------------ATMG--------------------------------------RSGLVLEAVSALLGCARDSVAAAGMLSHGMDLFFCQEAASPPPLPSLGGXXXXXXXXXXXXXSGLVLGETPRSLDEGGATNERASGLAGRRIVGDAVVVLVGGGTAHGAAGSGDVDGDG 477
            +WNKIVKGLKRMG ++R    G G GG                    GF +R+ S F + G  XXXXXXXXXXXXXXX             DLAEWE+SR GKR GD RYV+QLRQP+SGSFLLLGT + L+YEEWVEDIL     TL+LEWT+RFR+KMSKD SPPLSAFK LPDRDWNREWEAACSLTGGGRGGRDPRVTIALGQQFRAFAGAVAGAA+RA+++Q                                D     +R ALSR+TPD+C +F++GNVAFVLAPRGPG GY+THKRLGAELKGA VLRRAVERRV S VG GG GP+ VNALAPLSCV+DL+GFRAAAVALPAF PR +SK KLR RPKLLG                                                               EEG                                 G G                       ED        +D A                          A MG                                      R+ LV+EAVSALL C+R+SVA+A MLSHG+DL++ ++  +      L        XXXXXXX                 TNERASGLAGRRI+GDAVVVLVGGG  HGAAGSGDVDGDG
Sbjct:  351 KWNKIVKGLKRMGPSRRVGKGGRGMGGSLGDGEGSATFDERGEETEEGFAARKGSLFDEEGRGXXXXXXXXXXXXXXXXXXXXXXXXADDVDLAEWELSRVGKRAGDARYVVQLRQPSSGSFLLLGTTDALLYEEWVEDIL-----TLSLEWTRRFRSKMSKDSSPPLSAFKLLPDRDWNREWEAACSLTGGGRGGRDPRVTIALGQQFRAFAGAVAGAAMRASLRQRQHSSSPSQDEGWESLAPLRSMEAEDKANGGGDTRTGDVRAALSRSTPDDCWSFLMGNVAFVLAPRGPGGGYKTHKRLGAELKGAQVLRRAVERRVRSGVGSGGTGPELVNALAPLSCVLDLYGFRAAAVALPAFMPRTKSKQKLRARPKLLGTISWTFSSIHGLDGGDSPDAKWGYDDVRKLISQQIGLSKAENPHLSIARGVLSGDGKIRESDVEEGKDPSSSPPATMVLFPDLLPPENVLLARLSGAGAGPGTSXXXXXXXXXXXXXEPVAVWGAEDVVRAVVLPQDSASRVHAYETLDLAVAAAAXXXXXAERAAEMGDVDRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTDRASLVVEAVSALLECSRESVASACMLSHGLDLYYNKDVEAGAE-DGLAVASSLDGXXXXXXXXXXXXXXXXXXXXXAPVTNERASGLAGRRIMGDAVVVLVGGGMGHGAAGSGDVDGDG 1050          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7948.16915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS90_ECTSI2.180e-16161.80eIF3_p135 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L4V6_9PHAE5.800e-13045.61Clu domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7948contigL-elsbetiae_contig7948:511..8877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7948.16915.1mRNA_L-elsbetiae_contig7948.16915.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7948 511..8877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7948.16915.1 ID=prot_L-elsbetiae_contig7948.16915.1|Name=mRNA_L-elsbetiae_contig7948.16915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=478bp
QWNKIVKGLKRMGSTKRGGGRGGPRGFESREASSFGDGGEDDYDEDDEDD
DDADDVDLAEWEVSRAGKREGDGRYVIQLRQPASGSFLLLGTDEPLVYEE
WVEDILYVQQRTLALEWTKRFRAKMSKDPSPPLSAFKFLPDRDWNREWEA
ACSLTGGGRGGRDPRVTIALGQQFRAFAGAVAGAALRANVQQQQQQRPTL
PPPTPPLTTDSAKSGGGGGGSGGGDIRGALSRATPDECSAFMVGNVAFVL
APRGPGSGYRTHKRLGAELKGAHVLRRAVERRVLSSVGGGGAGPDRVNAL
APLSCVVDLHGFRAAAVALPAFKPRPESKPKLRPRPKLLGCEEGGKGEDE
DDAGATMGRSGLVLEAVSALLGCARDSVAAAGMLSHGMDLFFCQEAASPP
PLPSLGGGGGTGGGSRSGSGSGLVLGETPRSLDEGGATNERASGLAGRRI
VGDAVVVLVGGGTAHGAAGSGDVDGDGE
back to top