prot_L-elsbetiae_contig794.16908.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig794.16908.1
Unique Name	prot_L-elsbetiae_contig794.16908.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	734

Homology

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BLAST of mRNA_L-elsbetiae_contig794.16908.1 vs. uniprot
Match: D8LBR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR8_ECTSI)

HSP 1 Score: 677 bits (1746), Expect = 1.130e-234
Identity = 401/708 (56.64%), Postives = 441/708 (62.29%), Query Frame = 0

Query:    1 MPGGVVASLFAAAGRNNKASATAVAAGRLEVDPRIQPVPRRPRWRQIL----RRKEGASFPLDPDDPLPRTMEELYRQVASEPPLDXXXXXXXXXXXXXXXXEFVEEAVRATFKCTEDDAWWETNEAEWDGMAESPATSFAVGGDGD-GGGEEWGMEDYFGEETPAWRPSDDLA-SYSLSAYKAGIMGESAAAGAGGGLRSRAEASELFGLTPFGRYWESVPDLGTTGRVYAHNAVDRMGALKFLMNFTCNGMHGSVESLQSGHFLWGYVDQLDWMRRSGRLSSTPGSIKVDPSSWWGRVSYALTIVPLAAAVECGAAVSILDPGGGRAGNXXXXXXXXXXDRQGGQQKDNLQLPQLRRAVRAWKRVWSLIDPDIASRVQLNMPVHDSLQERVRRAQWAAHLESLDAVDALYGEEFDKLPSEAEREFARGWCRAARLFAEAAAHTNLDRCLLPLGAGYAPERMLTGNDDDGVXXXXXXXXXXXXXXXXXXADLAA------AAVALNTRRCVASARWLGTLRRPIFGALRRLWRRSCASYPARREAARVLRRACYGGRRAKAAAWARSFLFMFVPDLNYRKLSLPLGVDPAEEVEYDPDFRLSDVSKPPPHAAGSRPSNPLQWPWYDGRKPDPSAGSVGA-GWGEDDDGLLGGSAVV---GGMFPRGREPVDRSFEALQRREREMMQDLRAAKERLEKSERSEGASGD 692
            MP G    LFAA  R     +T VAA R     R+QP PR+ R R+I     R  +G    LDPDDPLPRTMEELYR++ASEPPL+                  VEEAVRATFKCTEDDAWW+ N  EWD MAE+P   FA+G + D GGG  WGM+DYFGEE P W  SD+ A ++SLSAYKAGI    A  G G G     +A+ELF  TPF +YWESVPDL T GRVYA+NAVDRM ALKFLMN T NGMHGS ES+QSGHFLWGYVDQLDWMRRSGRLSSTPGSIK                                                                                                    ER+RRAQWAAHLESLDAV+ALYG+EFD LPS AEREFARGWCRAARLFA AAAHTNL+RCLLPLGAGYAPER+LT +DD                      D  A      A VALNTRRCV S RWLGTLR P+   L RLWRRSCASYPARR  ARVLR ACYGGRRAKAAAWA+SFLF+FVPDLNYRKL+ PLGVDPAEEVEYDPDF   D SKP P   GSRP NPLQWPWY+GR+PDPSAG  G  GWGEDDDGLL   + V   GGMFP GREPVD SFEA QRRE+E+M+DLRA    L++ E S+G SGD
Sbjct:    1 MPSGTA--LFAAHRRRCSKPSTGVAAAR-----RLQPDPRKRRRRRIDSGGDRSGQGT---LDPDDPLPRTMEELYRRIASEPPLNLEQQYKKALEPDAEEMGMVEEAVRATFKCTEDDAWWDENGQEWDRMAENPGKHFALGREEDRGGGVVWGMQDYFGEEAPEWGLSDEPAVNFSLSAYKAGIPERPAKDGEGSGR----QAAELFERTPFAQYWESVPDLRTAGRVYAYNAVDRMAALKFLMNCTYNGMHGSAESMQSGHFLWGYVDQLDWMRRSGRLSSTPGSIK----------------------------------------------------------------------------------------------------ERIRRAQWAAHLESLDAVEALYGKEFDMLPSRAEREFARGWCRAARLFAVAAAHTNLERCLLPLGAGYAPERLLTDDDDFLTAAARKQGPRSLESVPFGPPDSVAEAERDSAVVALNTRRCVTSVRWLGTLRAPVLAGLCRLWRRSCASYPARRRVARVLREACYGGRRAKAAAWAKSFLFLFVPDLNYRKLTFPLGVDPAEEVEYDPDFEPRDFSKPYPRPVGSRPLNPLQWPWYEGRRPDPSAGLPGGEGWGEDDDGLLASPSAVAAAGGMFPPGREPVDGSFEAGQRREQEVMEDLRALGYNLDEREGSKGGSGD 594

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BLAST of mRNA_L-elsbetiae_contig794.16908.1 vs. uniprot
Match: A0A6H5KEJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ4_9PHAE)

HSP 1 Score: 548 bits (1411), Expect = 4.120e-185
Identity = 305/466 (65.45%), Postives = 339/466 (72.75%), Query Frame = 0

Query:    9 LFAAAGRNNKASATAVAAGRLEVDPRIQPVP--RRPRWRQILRRKEGASFPLDPDDPLPRTMEELYRQVASEPPLDXXXXXXXXXXXXXXXXEFVEEAVRATFKCTEDDAWWETNEAEWDGMAESPATSFAVGGDGD-GGGEEWGMEDYFGEETPAWRPSDDLA-SYSLSAYKAGIMGESAAAGAGGGLRSRAEASELFGLTPFGRYWESVPDLGTTGRVYAHNAVDRMGALKFLMNFTCNGMHGSVESLQSGHFLWGYVDQLDWMRRSGRLSSTPGSIKVDPSSWWGRVSYALTIVPLAAAVECGA-------AVSILDPGGGRAGNXXXXXXXXXXDRQGGQQKDNLQLPQLRRAVRAWKRVWSLIDPDIASRVQLNMPVHDSLQERVRRAQWAAHLESLDAVDALYGEEFDKLPSEAEREFARGWCRAARLFAEAAAHTNLDRCLLPLGAGYAPERMLTGNDD 463
            LFAA  R      T VAA R     R+QP P  RR R R+    + G    LDPDDPLPRTMEELYR++ASEPPL+                  VEEAVRATFKCTEDDAWW+ N  EWD MAE+P   FA+G + D GGG  WGM+DYFGEE P W  SD+ A ++SLSAYKAGI G +A  G G G     EA+ELF  TPF +YWESVPDL   GRVYA+NAVDRM ALKFLMN T NGMHGS ES+QSGHFLWGYVDQLDWMRRSGRLSSTPGSIKVDP+SWWGRVS+ALTIVPL AAVE GA       A+S+L   G  +G                   D+LQLP+LRRAVRAW+RVW   DPDIA RV L+MPVHDSLQERVRRAQWAAHLESLDAV+ALYG+EFD LPS+AEREFARGWCRAARLFA AAAHTNL+RCLLPLGAGYAPER+LT +DD
Sbjct:    7 LFAAHRRRCSKPLTGVAAAR-----RLQPDPQKRRRRSRESCGDRSGQGT-LDPDDPLPRTMEELYRRIASEPPLNLEQQYKKALEPDAEEIGMVEEAVRATFKCTEDDAWWDENGQEWDRMAENPGEHFALGREEDRGGGVVWGMQDYFGEEAPEWGLSDEPAVNFSLSAYKAGIPGRAAKDGEGRGR----EAAELFERTPFAQYWESVPDLRAAGRVYAYNAVDRMAALKFLMNCTYNGMHGSAESMQSGHFLWGYVDQLDWMRRSGRLSSTPGSIKVDPNSWWGRVSFALTIVPLVAAVESGAWDDDQVAAISVLGVSGDGSGR-----------------NDDLQLPELRRAVRAWRRVWRFRDPDIADRVVLDMPVHDSLQERVRRAQWAAHLESLDAVEALYGKEFDMLPSKAEREFARGWCRAARLFAAAAAHTNLERCLLPLGAGYAPERLLTDDDD 445

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig794.16908.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig794.16908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LBR8_ECTSI	1.130e-234	56.64	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KEJ4_9PHAE	4.120e-185	65.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 659..686
None	No IPR available	PANTHER	PTHR18820:SF1	PROTEIN LEG1 HOMOLOG	coord: 384..462
None	No IPR available	PANTHER	PTHR18820:SF1	PROTEIN LEG1 HOMOLOG	coord: 228..311
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..733
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..13
IPR008499	Leg1	PFAM	PF05612	Leg1	coord: 217..311 e-value: 4.1E-10 score: 39.3
IPR008499	Leg1	PANTHER	PTHR18820	UNCHARACTERIZED DUF781	coord: 384..462
IPR008499	Leg1	PANTHER	PTHR18820	UNCHARACTERIZED DUF781	coord: 228..311

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig794	contig	L-elsbetiae_contig794:8293..11073 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig794.16908.1	mRNA_L-elsbetiae_contig794.16908.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig794 8293..11073 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig794.16908.1 ID=prot_L-elsbetiae_contig794.16908.1|Name=mRNA_L-elsbetiae_contig794.16908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=734bp
MPGGVVASLFAAAGRNNKASATAVAAGRLEVDPRIQPVPRRPRWRQILRR
KEGASFPLDPDDPLPRTMEELYRQVASEPPLDMEEQYRKALEPGPKDMEF
VEEAVRATFKCTEDDAWWETNEAEWDGMAESPATSFAVGGDGDGGGEEWG
MEDYFGEETPAWRPSDDLASYSLSAYKAGIMGESAAAGAGGGLRSRAEAS
ELFGLTPFGRYWESVPDLGTTGRVYAHNAVDRMGALKFLMNFTCNGMHGS
VESLQSGHFLWGYVDQLDWMRRSGRLSSTPGSIKVDPSSWWGRVSYALTI
VPLAAAVECGAAVSILDPGGGRAGNGNGNGGGGGGDRQGGQQKDNLQLPQ
LRRAVRAWKRVWSLIDPDIASRVQLNMPVHDSLQERVRRAQWAAHLESLD
AVDALYGEEFDKLPSEAEREFARGWCRAARLFAEAAAHTNLDRCLLPLGA
GYAPERMLTGNDDDGVTDGGGAVAGAAAEQDSGAADLAAAAVALNTRRCV
ASARWLGTLRRPIFGALRRLWRRSCASYPARREAARVLRRACYGGRRAKA
AAWARSFLFMFVPDLNYRKLSLPLGVDPAEEVEYDPDFRLSDVSKPPPHA
AGSRPSNPLQWPWYDGRKPDPSAGSVGAGWGEDDDGLLGGSAVVGGMFPR
GREPVDRSFEALQRREREMMQDLRAAKERLEKSERSEGASGDRGRSSEAH
RHRQGEAADATGGARAEPQGGGESTNSARTVFI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008499	Leg1