prot_L-elsbetiae_contig790.16852.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig790.16852.1
Unique Nameprot_L-elsbetiae_contig790.16852.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length415
Homology
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: D7FS62_ECTSI (tRNA pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS62_ECTSI)

HSP 1 Score: 534 bits (1376), Expect = 4.310e-187
Identity = 292/423 (69.03%), Postives = 324/423 (76.60%), Query Frame = 0
Query:    1 MLAVASSGGCFLFRGSASALGLFGQVGWLRPLQRQPPAYTSQML-------QSWAEGGAQG-STGIIYTPRHSADAATLQRTLQRPSRLLGTSSAVPPHREVA-DSGELKSPLTPPNNDNALAEARRLARFDEEGEYRVFRELLEGKKTRFVSRVSYDGTKFNGFQLQ-NGLPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAIHFDLPNADEDLAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQVEKGWPWSSMLNARGKIYSYRLFVGQIPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIFRTGVRDSCLIYAAPAHGLTLETVLYDGY 413
            MLA   SGG  L RG   A+GL        P    P      +L       Q W  G   G S G I     + D ++  R L+     + T S + PH  V  D      P +  NN++  A+ARR ARFDEEGEYRVFRELLEGKKTRFVSRV YDGT + GFQLQ +GLPTVQG LEKALS RFQTYVPVVAAGRTDTGVH+VGQA+HFDLPNA+EDL+QL YSMNQMMPEDVRVWNMSVAPPS PWQVEKGWPWSSMLNARGK YSYRLFVG + SPLDRLYRAHAS+AAGSPI+V+LLY+TIPK  G+HDFAGFSNEV +RATLKK+DGLGEFNT RTVYSAEIIDEG GNI++ FHLDGALYRMVRNMVG LLAVAAGRL+PE++DEIF T VRDS LIYAAPAHGLTL+TVLYDGY
Sbjct:    1 MLAAVVSGGFTLLRG---AVGL--ATATAVPAPPLPSHVAMPVLCRARPRHQRWPNGSIVGPSAGFIS--HLAVDPSSATRVLR-----VCTPSTIAPHGGVEEDLPRSTPPRSTTNNESQQAKARREARFDEEGEYRVFRELLEGKKTRFVSRVMYDGTNYKGFQLQGHGLPTVQGVLEKALSTRFQTYVPVVAAGRTDTGVHSVGQAVHFDLPNANEDLSQLAYSMNQMMPEDVRVWNMSVAPPSSPWQVEKGWPWSSMLNARGKRYSYRLFVGPVMSPLDRLYRAHASQAAGSPINVDLLYQTIPKLVGKHDFAGFSNEVTKRATLKKEDGLGEFNTVRTVYSAEIIDEGGGNIRLDFHLDGALYRMVRNMVGALLAVAAGRLEPEVIDEIFATRVRDSRLIYAAPAHGLTLDTVLYDGY 411          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: R7QN10_CHOCR (tRNA pseudouridine synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN10_CHOCR)

HSP 1 Score: 203 bits (517), Expect = 1.890e-58
Identity = 120/287 (41.81%), Postives = 168/287 (58.54%), Query Frame = 0
Query:  139 KTRFVSRVSYDGTKFNGFQLQNGLPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAIHFDLPNA-----DEDLAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQVEKGW--------PWSSMLNARGKIYSYRLFVGQIPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIFRTGVRDSCLI-YAAPAHGLTLETVLYD 411
            K R  +RV+YDGT + G+Q Q   PTVQGALE AL ++F   + VV A RTDTGVHA GQA+HFD+P A      E   +  Y++NQM+P DVRV  +SVAP   P +V            PW ++ NA+GK+Y+YR+    +  PL RLYR H  +A       ELL     KF G HDF+ F+N  +              N  R ++SA +I EG G  ++ F ++GA+YRM+RN++GT+L+V+ G +    +D +F +  +D  L+  +APA GL LE V+YD
Sbjct:   53 KQRIRARVAYDGTLYRGWQYQTDQPTVQGALEDALRRKFGHTIRVVGASRTDTGVHARGQAMHFDIPIARALRDGESERKFHYTLNQMLPPDVRVPVLSVAPTVVPCKVTDECGNVGIATRPWHAIYNAKGKLYTYRISTSPVFDPLGRLYRYHEWRATKFGFSEELLREASAKFVGSHDFSAFTNSTNPPPGFVPP---VLSNPIRHIHSATVIPEGAGMYRIEFVINGAMYRMIRNIMGTILSVSCGSMDISNIDHLFAS--KDRRLVPKSAPAKGLCLEKVIYD 334          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: F0Y1Q4_AURAN (tRNA pseudouridine synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1Q4_AURAN)

HSP 1 Score: 196 bits (497), Expect = 6.140e-56
Identity = 122/281 (43.42%), Postives = 158/281 (56.23%), Query Frame = 0
Query:  140 TRFVSRVSYDGTKFNGFQLQ-NGLPTVQGALEKALSQRFQ-TYVPVVAAGRTDTGVHAVGQAIHFDLPNAD---EDLAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQVEKGWPWSSMLNARGKIYSYRLFVGQ-IPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIFRTGVRDSCL-IYAAPAHGLTLETVLYDGY 413
            TR+  RV+YDGT+F G+Q+Q  G  TVQG L  AL  RF    +P + A RTD GVHA GQ  H DLP A      L  L + +N+++P+D RV ++  AP   PWQ  +G PW ++ NA GK Y+YRL   +    PL RLYR H    A   +D   L   +  F GEHDFA F+N     A      G    +T R + SA ++DEG G+  + F LDGALY+MVRN+VG  +AVA G L  + +  +   G R +     AAPA GL LE V YD Y
Sbjct:   33 TRYALRVAYDGTRFKGWQVQPGGARTVQGELNAALRTRFGGADIPTLGASRTDAGVHARGQCAHADLPVAPLGGAPLELLEHQINRLLPDDARVHDLRPAPAPKPWQAREGLPWHAIANAAGKRYAYRLTARRGSADPLGRLYRGHV---AYRDVDFGRLDDALSCFVGEHDFAAFANN----APGLDPSGAAR-STTRAIRSATLLDEGGGDATLTFELDGALYKMVRNVVGAAVAVADGALPRDAIPALLAPGARRADNPAKAAPACGLCLEEVYYDDY 305          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: A0A1Z5KP68_FISSO (tRNA pseudouridine synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP68_FISSO)

HSP 1 Score: 194 bits (492), Expect = 4.360e-55
Identity = 120/292 (41.10%), Postives = 165/292 (56.51%), Query Frame = 0
Query:  141 RFVSRVSYDGTKFNGFQLQ-NGLPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAIHFDLPNA-DEDLAQLTYSMNQMMPEDVRVWNMSVAPPSDPW--QVEKGWPWSSMLNARGKIYSYRLFVGQIPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEII--DEGEGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIFRTGV---------------RDSCLIYAAPAHGLTLETVLYD 411
            R+ +RV+YDG  F+GFQLQ  G  TVQG LE  L QR    V +V AGRTDTGVHA GQAIHFDL +   E L+Q+ +S+N M+P DV +WN+S+AP  D    Q  + + W+ + N+ GK+YSYRL +  + SPL+R +R H     G  +D+ LL R +  + G HDF  F+  ++     +++ G    +T RTVYSA  I  DE  G  ++ FHL GALY+ VRNMVGT +  +   +  E   ++                    R+      AP  GLTLE V +D
Sbjct:   23 RYRARVAYDGAGFHGFQLQPEGKRTVQGCLEDVLGQRLGQSVRLVGAGRTDTGVHARGQAIHFDLHSPLSEPLSQIEHSINAMLPTDVCLWNLSLAPTDDTETAQPSQQYLWNVLYNSVGKLYSYRLCLAPVMSPLERHHRWHPDSLHGKAVDIPLLQRLLNYYEGTHDFRAFAGALEAN---QRRSGR-TVSTVRTVYSANWIVEDESLGYYRIEFHLQGALYKQVRNMVGTAIDASRSIITEEAFLDLLHGSSATIENDHLPKKQQKRREDNKSKPAPPQGLTLEHVYFD 310          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: A0A836CB05_9STRA (tRNA pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB05_9STRA)

HSP 1 Score: 194 bits (494), Expect = 9.270e-55
Identity = 118/284 (41.55%), Postives = 159/284 (55.99%), Query Frame = 0
Query:  142 FVSRVSYDGTKFNGFQLQNG-LPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAIHFDLPNADED--------LAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQVEKGWPWSSMLNARGKIYSYRLFVGQIPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIFRTGV-----RDSCLIYAAPAHGLTLETVLYD 411
            + ++V YDG  F GFQLQ G   TVQG LEKAL +RFQ  + V+ A RTD GVH+ GQ +HFDLP +           +A L Y +NQM+PEDVRV+ ++  P   P Q ++G PWS+ +NAR K+Y+YRL    + +PLD   RAH       P+D+ +L  T+           FS++ D+ A L    G G+ +T RTV    +     G I +   LDGALY+MVR MVG  +AVAAGR+   ++     +G       D      APA GLTLE V Y+
Sbjct:   80 YTAKVMYDGVGFRGFQLQPGNYRTVQGELEKALQKRFQRRISVLGASRTDAGVHSRGQVVHFDLPASGASALAYDPAAMALLQYCLNQMLPEDVRVYGLAPVPLPSPQQRQQGLPWSANVNARAKLYTYRLSFCDVTNPLDARQRAHYPPVLW-PVDLGVLEATL----------AFSSKADKSAALVAAAGRGDRDTVRTVVRITLRRGAPGYIDIDVLLDGALYKMVRYMVGAAVAVAAGRMDARVITTSLLSGNWEGSGADKSAAAPAPACGLTLEEVFYE 352          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: B8CDY0_THAPS (tRNA pseudouridine synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDY0_THAPS)

HSP 1 Score: 191 bits (485), Expect = 1.120e-54
Identity = 117/282 (41.49%), Postives = 164/282 (58.16%), Query Frame = 0
Query:  145 RVSYDGTKFNGFQLQNGLPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAIHFDL--------PNADEDLAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQVEKGWPWSSMLNARGKIYSYRLFVGQ-IPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEG-------EGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIFRTGVRDSCLIYAAPAHGLTLETVLY 410
            RV+Y GT FNG+QLQ G  TVQG +E+ L++RF   +PVV AGRTD GVHA GQAIHFDL        P    ++ Q  +SMN+MMP D+R++++ +AP +         PW ++  A+ K YSYRL +G  + +P++R  R H        +D+E L   +  + G HDF  F  ++++ A  KK++     NT RTV+  E+I +        EGN ++ F L GALY+MVRNMVGT + V  GR+K E + E+ +   R       AP  GLTLE V Y
Sbjct:    1 RVAYHGTPFNGWQLQPGRSTVQGEIEEVLTRRFHRRIPVVGAGRTDAGVHARGQAIHFDLFHDEIPFKPPTPPEILQ--HSMNRMMPLDIRMFHLQLAPYT---------PWHAIQRAQSKWYSYRLTLGPTLWNPMERFTRTHFVH-----LDMERLESILQLYVGTHDFGAFGGQLEQNA--KKRNDGKRINTVRTVFRVELIQQEQLGFIGEEGNYRIDFLLKGALYKMVRNMVGTAMEVWLGRMKEEQLAELLKIPDRKDNPSKPAPPEGLTLECVYY 264          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: A0A7S4MSL3_9STRA (tRNA pseudouridine synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MSL3_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.140e-54
Identity = 124/294 (42.18%), Postives = 161/294 (54.76%), Query Frame = 0
Query:  141 RFVSRVSYDGTKFNGFQLQNGLPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAIHFDLPNADE---------DLAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQ----VEKGWPWSSMLNARGKIYSYRLFVGQIPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIFRTG---------VRDSCLIYAAPAHGLTLETVLYDG 412
            R+ +RV+YDGT FNG+Q Q    T+QG +E  LS+RF   V +V AGRTD GVHA GQA HFDL  ADE         DL QL  S+N M+  D+RVWN   APP   ++    +E+   W  + NA  K+YSYR+       PL R  R H       P ++ELL   +  F G HDF  F+  +D     ++K G     T RTVY+  +++EG GN ++ F L GALY+MVRNM+GT LAVA GRL+ + + E              VR       A   GLTLE V +DG
Sbjct:   90 RYRARVAYDGTGFNGWQTQAKGRTIQGDIEAVLSRRFDRPVRIVGAGRTDAGVHARGQAFHFDL-RADEIGVADSKCFDL-QLQRSLNSMLRRDIRVWNTCQAPPPSSYKNWEGIERNHKWHVIYNAEKKLYSYRISTAPYLDPLLRHTRTHVF----DPTNIELLRTALQHFEGTHDFRAFAGAIDAN---ERKSGK-VLGTIRTVYAVNLVEEGNGNYRVDFLLKGALYKMVRNMMGTALAVAQGRLEEDRLLEFLHHDSSEGKVLQFVRKDNKCKPAAPEGLTLEHVYFDG 373          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: A0A482SL84_9ARCH (tRNA pseudouridine synthase A n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL84_9ARCH)

HSP 1 Score: 185 bits (470), Expect = 1.990e-51
Identity = 112/284 (39.44%), Postives = 159/284 (55.99%), Query Frame = 0
Query:  141 RFVSRVSYDGTKFNGFQLQNG--LPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAIHFDLPNAD----EDLAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQVEKGWPWSSMLNARGKIYSYRLFVGQIPSPLDRLYRAHASKAAGSPIDVELLYRTIPK----FAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRL-KPEIVDEIFRTGVRDSCLIYAAPAHGLTLETVLYDGY 413
            R+V+RVSYDGT + G+Q Q+     T+QG + + LS+R    V +  AGRTD GVHA GQ IHFDL + +    + +    + +NQM+P D+RV+NMS+APP    Q+  G P+ +  +A GK Y YR    Q   P+ R    H  +        E  Y T+P     F G HDFA F N+V +     +   + E++T RT+YS + IDEG G  ++ FH+  ALY+M+RNMVG  ++VA G++ K +IV  +     R +      P  GL LE V YD Y
Sbjct:   75 RYVARVSYDGTAYRGWQQQSQPRTKTIQGTINQNLSKRLSREVRITGAGRTDQGVHAKGQGIHFDLFDHEYLNPDSIPNFQFKLNQMLPTDIRVYNMSLAPPGTVEQMLTGDPFHATKSAIGKKYIYRYCTNQFVEPIHRHIYTHFYR--------EYDYSTLPDCLQCFVGPHDFACFGNKVKQFVKDFETKPI-EYDTMRTIYSIQHIDEGSGYYRIEFHIKSALYKMIRNMVGACVSVAKGQITKEDIVQMLVNPTQRINNPAIPVPPEGLILEHVYYDHY 349          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: L1IVY1_GUITC (tRNA pseudouridine synthase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IVY1_GUITC)

HSP 1 Score: 182 bits (462), Expect = 3.240e-51
Identity = 98/236 (41.53%), Postives = 142/236 (60.17%), Query Frame = 0
Query:  138 KKTRFVSRVSYDGTKFNGFQLQNGLPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAIHFDLPNADEDLAQLTYSMNQMMPEDVRVWNMSVAPPSD--PWQVEKGWPWSSMLNARGKIYSYRLFVGQIPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMVFHLDGALYRMVRNMVGTLLAV 371
            K  R+   V YDGT +NGFQLQ+  P++QG LE  LS++ Q    VV AGRTD+GVH+ GQ +HFD      DL +  + MN M+P DV++  +      D  P  + +   W ++ +AR K+YSYR+F+G++  P+ R  R H  +     +D++LL      F G HDF+ FSN     +T+         +T RT+Y   ++ EGEGN+++ F LDGALY+MVRN+VGT+LAV
Sbjct:   30 KTFRYRCNVMYDGTNYNGFQLQHYQPSIQGLLETVLSRKLQRRTRVVGAGRTDSGVHSRGQVVHFDSSENITDLQKFQHGMNLMLPLDVKICGLEHVQDLDFVP-HLNETRKWHAIYSARKKLYSYRIFIGKVQDPITRHSRHHEYRN----VDLDLLREVAAMFEGTHDFSAFSNTRGDNSTM---------DTVRTIYRVGVVFEGEGNVRLDFELDGALYKMVRNIVGTILAV 251          
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Match: A0A8J2SCD1_9STRA (tRNA pseudouridine synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCD1_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.090e-51
Identity = 116/280 (41.43%), Postives = 156/280 (55.71%), Query Frame = 0
Query:  138 KKTRFVSRVSYDGTKFNGFQLQNGLPTVQGALEKALSQRFQ-TYVPVVAAGRTDTGVHAVGQAIHFDLPNADEDLAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQVEKGWPWSSMLNARGKIYSYRLFVGQ-IPSPLDRLYRAHASKAAGSPIDVELLYRTIPKFAGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMVFHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIF--RTGVRDSCLIYAAPAHGLTLETVLYDGY 413
            +  R+  RV+YDGT FNG+Q Q    TV+G L KA + RF    VP++ A RTD+GVHA GQA H DLP    D+  L + +N+M+P+DVR+  +  APP      EK  PW ++  + GK YSYR+        PL+RLYRAH        +D  LL   + +  G  DF  F+N    +  L       E +T R + S E  DEG G+  +   LDGALYRMVRN+VG  +A   G+LK + +DE+   R   RD+    +APA GL LE V YD +
Sbjct:   14 RAARYALRVAYDGTHFNGWQHQPNARTVEGELRKAFTTRFDGANVPLLGASRTDSGVHARGQAAHVDLPEEVADVDLLKHQLNRMLPDDVRINCVREAPPGG----EK--PWHAIACSTGKRYSYRMTARYGSQDPLERLYRAHVCY---EDLDFALLSNALQRCRGRFDFKAFANNAPTQNPL-------EMDTIREIRSIEAEDEGFGDYTVQIELDGALYRMVRNVVGACVACGTGKLKLDELDELLSGRKTRRDNPT-KSAPARGLCLEEVFYDDF 276          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig790.16852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS62_ECTSI4.310e-18769.03tRNA pseudouridine synthase n=2 Tax=Ectocarpus Tax... [more]
R7QN10_CHOCR1.890e-5841.81tRNA pseudouridine synthase n=1 Tax=Chondrus crisp... [more]
F0Y1Q4_AURAN6.140e-5643.42tRNA pseudouridine synthase n=1 Tax=Aureococcus an... [more]
A0A1Z5KP68_FISSO4.360e-5541.10tRNA pseudouridine synthase n=1 Tax=Fistulifera so... [more]
A0A836CB05_9STRA9.270e-5541.55tRNA pseudouridine synthase n=1 Tax=Tribonema minu... [more]
B8CDY0_THAPS1.120e-5441.49tRNA pseudouridine synthase (Fragment) n=1 Tax=Tha... [more]
A0A7S4MSL3_9STRA1.140e-5442.18tRNA pseudouridine synthase n=1 Tax=Odontella auri... [more]
A0A482SL84_9ARCH1.990e-5139.44tRNA pseudouridine synthase A n=1 Tax=archaeon Tax... [more]
L1IVY1_GUITC3.240e-5141.53tRNA pseudouridine synthase n=1 Tax=Guillardia the... [more]
A0A8J2SCD1_9STRA4.090e-5141.43tRNA pseudouridine synthase n=1 Tax=Pelagomonas ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 147..229
e-value: 2.1E-5
score: 24.9
coord: 299..411
e-value: 1.7E-16
score: 60.7
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 256..412
e-value: 2.4E-27
score: 97.4
NoneNo IPR availableGENE3D3.30.70.580coord: 138..238
e-value: 3.0E-28
score: 100.3
NoneNo IPR availablePANTHERPTHR11142:SF0TRNA PSEUDOURIDINE SYNTHASEcoord: 133..411
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..414
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 133..411
IPR001406Pseudouridine synthase I, TruAHAMAPMF_00171TruAcoord: 140..410
score: 27.608
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 139..413

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig790contigL-elsbetiae_contig790:5466..9997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig790.16852.1mRNA_L-elsbetiae_contig790.16852.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig790 5418..10211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig790.16852.1 ID=prot_L-elsbetiae_contig790.16852.1|Name=mRNA_L-elsbetiae_contig790.16852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=415bp
MLAVASSGGCFLFRGSASALGLFGQVGWLRPLQRQPPAYTSQMLQSWAEG
GAQGSTGIIYTPRHSADAATLQRTLQRPSRLLGTSSAVPPHREVADSGEL
KSPLTPPNNDNALAEARRLARFDEEGEYRVFRELLEGKKTRFVSRVSYDG
TKFNGFQLQNGLPTVQGALEKALSQRFQTYVPVVAAGRTDTGVHAVGQAI
HFDLPNADEDLAQLTYSMNQMMPEDVRVWNMSVAPPSDPWQVEKGWPWSS
MLNARGKIYSYRLFVGQIPSPLDRLYRAHASKAAGSPIDVELLYRTIPKF
AGEHDFAGFSNEVDRRATLKKKDGLGEFNTRRTVYSAEIIDEGEGNIKMV
FHLDGALYRMVRNMVGTLLAVAAGRLKPEIVDEIFRTGVRDSCLIYAAPA
HGLTLETVLYDGYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C
IPR001406PsdUridine_synth_TruA
IPR020103PsdUridine_synth_cat_dom_sf