mRNA_L-elsbetiae_contig7848.16804.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: A0A6H5JM32_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM32_9PHAE) HSP 1 Score: 376 bits (965), Expect = 1.820e-129 Identity = 182/206 (88.35%), Postives = 193/206 (93.69%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPDFKVIPSKMAS----NNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEALGEALEAREKQREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFGGSGGRYNPNEDRRQGE 606 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGG+ASFL RLAPDFK+IP KMA N NFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDD CVGRSACLTFEQG+LCP QSR FEVD+LEVWGVGGE+A+GEALEAR+KQREYTAAQIHKARQVDKSKFAT+AFDKEFLL KTFGG+GG YNPN+DRR+GE Sbjct: 122 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGEASFLFRLAPDFKIIPHKMARRVQRNQNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDKCVGRSACLTFEQGELCPEQSRRFEVDILEVWGVGGEKAVGEALEARDKQREYTAAQIHKARQVDKSKFATNAFDKEFLLGKTFGGNGGHYNPNKDRRKGE 327
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: A0A835YL28_9STRA (TLD-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL28_9STRA) HSP 1 Score: 211 bits (538), Expect = 1.330e-62 Identity = 107/223 (47.98%), Postives = 142/223 (63.68%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPDFKVIPSKMASNNNFQYLNLK------------------------GFSLPHGFGMGGSTEAFRFFIPEALD-DTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEALGEALEAREKQREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFGGSGGRYNPNEDR 594 R+ ++GYGGP+++++R+R SGAV GG A W+E N+FYGG SFL +L+P F+V SK AS N+ YLNLK GFSLPHG GMGG+ + FRFFIPE+ D + V +S C+TFE G+LCP +R FE+D LEVWG+GGEEA+ L+AR + R A ++KAR+VDK+KF + FD+EFLL KTF G E+R Sbjct: 296 RLCHSIMGYGGPSLLVLRDRVSGAVLGGVASDTWRELNTFYGGSESFLFQLSPSFRVCQSKPASERNYMYLNLKTKVLYHNIIEHCTAEXXXXXXXXXGFSLPHGLGMGGTRDNFRFFIPESFDAEASVAKSNCMTFEPGELCPSANRRFEIDSLEVWGLGGEEAVSAGLDARMRHRAAVAHTLNKARKVDKAKFLDNEFDREFLLGKTFNGGXXXXXKGENR 518
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: A0A7S3YII2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YII2_HETAK) HSP 1 Score: 189 bits (481), Expect = 6.950e-57 Identity = 108/216 (50.00%), Postives = 135/216 (62.50%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQAS--------FLLRLAPDFKVIPSKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSR-HFEVDVLEVWGVGG-----EEALGEALEAREKQREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFGGSGGRYNPNEDRRQGE 606 RV K +GYGGPT++L+R+ E GAV+GG A +PW+E N YGG FL RL P+F++ P+++ N NF YLNLKGFSLPHG GMGGS FRFF+PE L+D C + CLTFE G+L + F++ LEVWG GG E ALG+ LE RE A I KAR+VDK+ F +AFD+EFLL KTF + G D R GE Sbjct: 53 RVCHKALGYGGPTLVLVRD-EGGAVFGGLAPAPWREGNEMYGGXXXXXXXXXXXFLFRLEPEFRIYPARVGGNENFMYLNLKGFSLPHGMGMGGSIGNFRFFLPEMLED-CSTSARCLTFENGELSSSGKQGKFQILDLEVWGCGGSRAEVERALGKQLEVRE----TAARNIEKARKVDKAAFLDNAFDREFLLGKTF--ASGARGVAADVRGGE 260
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: A0A662WM33_9STRA (TLDc domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WM33_9STRA) HSP 1 Score: 174 bits (440), Expect = 7.310e-49 Identity = 96/198 (48.48%), Postives = 127/198 (64.14%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPDFKVIP-SKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEALGEALEAREKQREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFGGSGGRYNPNED 591 R++F L+GY GPT+ +IR+ GA++G DS WKES+ FYGG FL RLAP+ + + +N N+ YLN KGF+LP G GMGGST+ FR F+ E LD+ CL+FE G L S F VD +EVWG GG E GE +++ R+ TA I++AR+VDK++FA S FDKEF L+KTFG G R +D Sbjct: 248 RLSFHLLGYSGPTLTVIRDT-GGAIFGMFCDSEWKESSRFYGGNGCFLFRLAPETSIYRVTASGANENYMYLNSKGFALPRGLGMGGSTDKFRLFLSEDLDENSYSTPKCLSFESGRLS--SSEQFVVDAMEVWGCGGAE--GEL--SQKAHRQETADLINRARKVDKAQFAGSDFDKEFFLSKTFGHGGDRARVADD 438
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: A0A0W8D644_PHYNI (TLDc domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D644_PHYNI) HSP 1 Score: 164 bits (416), Expect = 3.070e-47 Identity = 88/188 (46.81%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPDFKVIP-SKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEALGEALEAREK-QREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFG 558 R+++ ++GY GPT+ +IR+ + GAV+G D+ WKES+ +YGG FL RLAP+ + S +N N+ YLN KGF+LP G GMGGST+ FR F+ E LD+ + CL+FE G L S F +D +EVWG GGEE+ E +K R+ TA I++AR+VDK++F + FDKE L KTFG Sbjct: 64 RLSYHILGYSGPTLTIIRDTQ-GAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANENYMYLNSKGFALPRGLGMGGSTDKFRLFLSEDLDENSYTTAKCLSFEPGRLS--SSEQFVIDAMEVWGCGGEES-----ELSQKAHRQETADLINRARKVDKAQFVGNDFDKEMFLGKTFG 243
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: A0A3R7J8C9_9STRA (TLDc domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8C9_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.010e-45 Identity = 87/200 (43.50%), Postives = 130/200 (65.00%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPDFKVIPSKMAS-NNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEALGEALEAREKQREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFGGSGGRYNPNEDRR 597 R+++ ++GY GPT+++IR+ + GAV+G D+ WKES+ +YGG FL R+AP+ + +S N N+ YLN KGF+LP G G+GGST+ FR F+ E LD+ S CL+FE G L ++ F +D +E WG GGEE+ +++ R+ TA I++AR+VDK++F + FDKEFLL+KTFG R +D + Sbjct: 236 RLSYHILGYSGPTLVVIRDTQ-GAVFGMFCDTEWKESSRYYGGNGCFLFRMAPEISIYRVTASSANENYMYLNSKGFALPRGLGIGGSTDKFRLFLSEDLDENSYSTSKCLSFEPGRLSSNEK--FVIDTIEGWGCGGEESDL----SQKAHRQETADLINRARKVDKAQFLGNDFDKEFLLSKTFGHGTDRARVADDEQ 428
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: A0A0N7L627_PLAHL (Uncharacterized conserved protein, contains TLDc domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L627_PLAHL) HSP 1 Score: 165 bits (417), Expect = 2.360e-45 Identity = 88/187 (47.06%), Postives = 123/187 (65.78%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPDFKVIP-SKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEALGEALEAREKQREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFG 558 R+++ ++GY GPT+ +IR+ + GAV+G D+ WKES+ +YGG FL RLAPD + S N N+ YLN KG++LP G GMGGST+ FR F+ E LD+ + CL+FE G L ++ HF +DV+EVWG GG+E+ +EK R TA I++AR+VDK++F + FDKE L KTFG Sbjct: 262 RLSYHILGYSGPTLTVIRDVQ-GAVFGMFCDTEWKESSRYYGGNGCFLFRLAPDINICRVSASGINENYMYLNSKGYALPRGLGMGGSTDKFRLFLSEDLDEQSYTIAKCLSFEPGRLSFNE--HFVIDVMEVWGCGGDESEHN----QEKHRLETAELINRARKVDKAQFIDNDFDKETFLGKTFG 441
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: D0N3A1_PHYIT (TLDc domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0N3A1_PHYIT) HSP 1 Score: 164 bits (415), Expect = 4.550e-45 Identity = 87/188 (46.28%), Postives = 122/188 (64.89%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPDFKVIP-SKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEALGEALEAREK-QREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFG 558 R+++ ++GY GPT+ +IR+ + GAV+G D+ WKES+ +YGG FL RLAP+ + S +N N+ YLN KGF+LP G GMGGST+ FR F+ E LD+ + CL+FE G L F +D +EVWG GGEE+ + R+K R+ TA I++AR+VDK++F + FDKE L KTFG Sbjct: 261 RLSYHILGYSGPTLTIIRDTQ-GAVFGMFCDTEWKESSRYYGGNGCFLFRLAPEIAIYRVSASGANENYMYLNSKGFALPRGLGMGGSTDKFRLFLSEDLDENSYTTAKCLSFEPGRLS--SGEQFVIDAMEVWGCGGEES-----DLRQKAHRQETADLINRARKVDKAQFVGNDFDKEMFLGKTFG 440
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: G4YU79_PHYSP (TLDc domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YU79_PHYSP) HSP 1 Score: 164 bits (414), Expect = 7.000e-45 Identity = 89/188 (47.34%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPDFKVIP-SKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEALGEALEAREK-QREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFG 558 R+++ ++GY GPT+ +IR+ + GAV+G D+ WKES+ +YGG FL R+AP+ + S +N N+ YLN KGF+LP G GMGGST+ FR F+ E LD+ CL+FE G L S F VD +EVWG GGEE+ E +K R+ TA I++AR+VDK++F S FDKE L KTFG Sbjct: 266 RLSYHILGYSGPTLTVIRDTQ-GAVFGMFCDTEWKESSRYYGGNGCFLFRMAPEINIYRVSASGTNENYMYLNSKGFALPRGLGMGGSTDKFRLFLSEDLDEHSYTTPKCLSFEPGRLS--SSEQFVVDTIEVWGCGGEES-----ELSQKAHRQETADLINRARKVDKAQFVGSDFDKEMFLGKTFG 445
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Match: K3WK64_GLOUD (TLDc domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK64_GLOUD) HSP 1 Score: 163 bits (413), Expect = 1.040e-44 Identity = 90/191 (47.12%), Postives = 118/191 (61.78%), Query Frame = 1 Query: 1 RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRLAPD---FKVIPSKMASNNNFQYLNLKGFSLPHGFGMGGSTEAFRFFIPEALDDTCVGRSACLTFEQGDLCPHQSRHFEVDVLEVWGVGGEEAL--GEALEAREKQREYTAAQIHKARQVDKSKFATSAFDKEFLLAKTFG 558 R+ F L+GY G T+++I++ E GAV+G DS WKES+ YGG FL RL P + V + SNNNF YLN KG+SLP G GMGG+T FR F+ E D++ + C++FE G L + HF +D +EVWG G EE L +AL R TA I++AR+VDK++F S FDKE L KTFG Sbjct: 267 RLCFHLLGYTGSTLVVIQDTE-GAVFGMFCDSEWKESSRMYGGNGCFLFRLEPQINIYNVSGASSGSNNNFMYLNSKGYSLPRGIGMGGNTNKFRLFVSEDFDESSYTTTQCMSFESGKLSSRE--HFTIDAMEVWGCGDEEDLLNQKAL------RNETAEMINRARKVDKAQFVGSDFDKEMFLGKTFG 448 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7848.16804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7848.16804.1 >prot_L-elsbetiae_contig7848.16804.1 ID=prot_L-elsbetiae_contig7848.16804.1|Name=mRNA_L-elsbetiae_contig7848.16804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp RVAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGQASFLLRback to top mRNA from alignment at L-elsbetiae_contig7848:7019..9253- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7848.16804.1 ID=mRNA_L-elsbetiae_contig7848.16804.1|Name=mRNA_L-elsbetiae_contig7848.16804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2235bp|location=Sequence derived from alignment at L-elsbetiae_contig7848:7019..9253- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7848:7019..9253- >mRNA_L-elsbetiae_contig7848.16804.1 ID=mRNA_L-elsbetiae_contig7848.16804.1|Name=mRNA_L-elsbetiae_contig7848.16804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig7848:7019..9253- (Laminarionema elsbetiae ELsaHSoW15)back to top |