mRNA_L-elsbetiae_contig7813.16764.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7813.16764.1
Unique NamemRNA_L-elsbetiae_contig7813.16764.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: D7FGQ9_ECTSI (Dolichyldiphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ9_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 5.270e-90
Identity = 142/174 (81.61%), Postives = 154/174 (88.51%), Query Frame = 1 
Query:  979 YLAVAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSGCINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKFGLTFAMVGWAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAALHGGG 1500
            YLAVAY+TLV VRRDLQVF+L+VGHL+DLVVNKALK W AEARP GCINTGHGMPSNH+QYMFFFASFVSLYLWGRVSF  EAK GLT  + GWAA V YSR+CLQCHT  QVAVGAAVG+ TG LWYLLYSKVLLPLLP+V KWPISRALY+KDYSQVS+VL FEH AL+G G
Sbjct:   39 YLAVAYMTLVVVRRDLQVFVLAVGHLVDLVVNKALKTWIAEARPPGCINTGHGMPSNHSQYMFFFASFVSLYLWGRVSFSAEAKVGLTSVLAGWAASVAYSRMCLQCHTLKQVAVGAAVGTTTGGLWYLLYSKVLLPLLPRVAKWPISRALYVKDYSQVSNVLAFEHDALYGDG 212
[Close]
BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: A0A6G0XWR1_9STRA (Dolichyldiphosphatase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWR1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.530e-26
Identity = 66/171 (38.60%), Postives = 102/171 (59.65%), Query Frame = 1 
Query:  979 YLAVAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSGCINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKFGLTFA-MVGWAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAAL 1488
            ++ V Y TL+  +RDL +  + +G L++ V N+ LK    + RP G      GMPS H+Q+M FFA++V LY   R+S   E +  L    ++  A  V +SRI L  H+  QV VGAAVG+GTG LWY++   + +PL P +  W IS+ L+I+D S +  ++ F++ A+
Sbjct:  177 FIMVMYATLILFQRDLHIIFMVLGQLVNEVFNQILKRTIDQKRPDGADMEDAGMPSAHSQFMAFFATYVVLYTSNRMSKRREWEHKLAIGGVILLALLVFFSRIRLGYHSVAQVVVGAAVGAGTGILWYIVLENIAMPLFPTIASWDISKLLFIRDCSHIPDMVEFQYEAI 347
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BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: K3X1C3_GLOUD (Dolichyldiphosphatase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1C3_GLOUD)

HSP 1 Score: 114 bits (286), Expect = 3.780e-25
Identity = 65/174 (37.36%), Postives = 103/174 (59.20%), Query Frame = 1 
Query:  979 YLAVAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSGCINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKFGLTFAMVG---WAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAALH 1491
            ++ V Y TLV  +RDL + ++ VG LL+ V N+ LK    ++RP G   +G GMPS H+Q++FFFA++V  Y W R++  T  +   +  +VG    A  V  SRI L  H+  QVAVGA VG+ +G  W+ L +K    L P + +  +++  YI+D S++  ++V++H   H
Sbjct:   39 FIMVMYATLVVFQRDLDIIMMLVGQLLNEVANQILKRSIQQSRPEGARMSGSGMPSAHSQFIFFFAAYVVAYTWKRLN--THRRLEQSLTIVGAIVLAVVVCVSRIRLGYHSKEQVAVGALVGALSGLAWHGLVAKTSPWLFPLITESALAQFFYIRDISRIPDLIVYQHQLCH 210
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BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: A0A7R9YPD4_DIALT (Dolichyldiphosphatase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YPD4_DIALT)

HSP 1 Score: 114 bits (286), Expect = 4.410e-25
Identity = 68/174 (39.08%), Postives = 102/174 (58.62%), Query Frame = 1 
Query:  979 YLAVAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSGCINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKF----GLTFAMVGWAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAAL 1488
            ++ VAY TL+  RR+L V  + VG L ++ +N ALKA   E RPSG   T  GMPS+H Q+M F+A+++  +L  RV F   A +    G   A++  A  V  SR+ L  H+  QVAVG  +G+  GA WY LY   + P +  +++ P+    Y++D S +S V+ +EHAA+
Sbjct:   40 FIIVAYATLIVSRRELHVGFVLVGQLANVRLNAALKAAIGEPRPSGAERTDAGMPSDHAQFMGFWATYICAFLAVRVRFAHRAGWRPLLGAAVALL--AVLVATSRVYLGEHSAAQVAVGGCIGALIGACWYALYEAAVRPNVVALLRAPLLEYFYVRDCSHLSDVVSWEHAAI 211
[Close]
BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: A0A3P8WBW3_CYNSE (Dolichyldiphosphatase n=2 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WBW3_CYNSE)

HSP 1 Score: 112 bits (281), Expect = 2.900e-24
Identity = 63/187 (33.69%), Postives = 99/187 (52.94%), Query Frame = 1 
Query:  988 VAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSG----CINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKFG-------LTFAMVGWAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAALHGGGANAQK 1515
            V ++TL+  +R+L       G LL+ VVN  LK  F E RP       + T +GMPS+H+Q+++FF  +  L+L+ R+     A+         L+  ++G A  V YSR+ L  HTW+Q+  G   G   G +W+L   +VL PL P++  WPIS    ++D S + ++L FE+        N Q+
Sbjct:   45 VGFVTLIVFKRELHTISFFGGLLLNEVVNWLLKQIFKEPRPCAGARSTLVTDYGMPSSHSQFIWFFVVYFFLFLYLRMHQTNNARCVDLLWRHILSIFLLGMALSVSYSRVYLLYHTWSQILYGGVTGCTIGIIWFLFTQEVLTPLFPKIAAWPISEYFLVRDTSLIPNILWFEYTVTRSEARNRQR 231
[Close]
BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: T1IY84_STRMM (Dolichyldiphosphatase n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IY84_STRMM)

HSP 1 Score: 112 bits (280), Expect = 4.900e-24
Identity = 66/174 (37.93%), Postives = 97/174 (55.75%), Query Frame = 1 
Query:  988 VAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSG---CINTGHGMPSNHTQYMFFFASFVSLYLWGRV------SFCTEA-KFGLTFAMVGWAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEH 1479
            V ++TL+  RRDL       G LL+  VN  LK    E+RP      + T +GMPS+H+Q+M+FFA++V+ ++  R+      SF   A K+ +T  +   A  V Y R+ LQ HTW QV  GA +G   G LW+ +   +L PL P V  WPI   L I+D + + +V+ FE+
Sbjct:   56 VGFVTLIIFRRDLHTITFFCGTLLNEAVNWVLKHIIRESRPCRGREVLFTEYGMPSSHSQFMWFFATYVAFFMLIRLHQISNSSFMDNAWKYFVTLCVFWSALTVSYGRVYLQYHTWTQVVSGALLGGVLGCLWFAVMQLILTPLFPMVALWPICEFLMIRDSTLIPNVMWFEY 229
[Close]
BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: UPI0003F06086 (dolichyldiphosphatase 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06086)

HSP 1 Score: 111 bits (278), Expect = 8.220e-24
Identity = 73/212 (34.43%), Postives = 110/212 (51.89%), Query Frame = 1 
Query:  886 DFVGVCYPLLSAPPYLNCRRGVLKFHLSFSRYLAVAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSG---CINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKFGLT------FAMVGW---AAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAA 1485
            DFVG C+   S  P                 ++ V+++TL+A RR+L       G L++ +VN  LK    + RP      + + +GMPSNH+Q+M+FF  ++ L+++ R+ + T +   L          VG    AA V YSR+ L  HT  QV  GA VGS    LW++    VL PL P VV WP+S  L ++D + + +VL FE+A+
Sbjct:   35 DFVGKCFAWFSLLPV----------------FIIVSFVTLIAFRRELHTITFFGGLLVNEIVNWVLKNIIRQPRPCREHEVVFSEYGMPSNHSQFMWFFGVYLVLFVYIRIQYSTSSTCSLVDLAWKHVVAVGALLVAAIVTYSRVYLHYHTNRQVYSGAVVGSLVAVLWFIFTQLVLTPLFPVVVSWPLSERLMLRDSTLIPNVLWFEYAS 230
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BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: A0A6J2QQC5_COTGO (Dolichyldiphosphatase n=17 Tax=Acanthomorphata TaxID=123368 RepID=A0A6J2QQC5_COTGO)

HSP 1 Score: 110 bits (276), Expect = 1.340e-23
Identity = 61/187 (32.62%), Postives = 100/187 (53.48%), Query Frame = 1 
Query:  988 VAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSG----CINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKFG-------LTFAMVGWAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAALHGGGANAQK 1515
            V ++TL+  +R+L       G +L+  VN  LK  F E RP       + T +GMPS+H+Q+M+FF  +  L+L+ R+     A+         L+  ++G+A  V YSR+ L  H+W+QV  G   G+  G +W+ +  +VL PL P++  WPIS    ++D S + ++L FE+        N Q+
Sbjct:   45 VGFVTLIMFKRELHTISFFGGLILNEGVNWVLKHIFREPRPCAGSHTTLQTEYGMPSSHSQFMWFFVVYFFLFLYLRMHQTNNARCVDLLWRHILSIILLGFALSVSYSRVYLLYHSWSQVFYGGVAGNTIGIIWFFITQEVLTPLFPKIAAWPISEYFLVRDTSLIPNILWFEYTVTRSEARNRQR 231
[Close]
BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: UPI0014711AE0 (dolichyldiphosphatase 1 n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI0014711AE0)

HSP 1 Score: 110 bits (275), Expect = 1.780e-23
Identity = 61/186 (32.80%), Postives = 97/186 (52.15%), Query Frame = 1 
Query:  988 VAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSG---CINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKFG-------LTFAMVGWAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAALHGGGANAQK 1515
            V ++TL+  +R+L       G LL+  VN  LK    E RP      ++T +GMPSNH+Q ++FF  +  L+L+ R+     A+         L+  ++G A  V YSR+ L  HTW QV  G   GS  G +W+ +  ++L PL P++  WP+S    ++D S + ++L FE+        N Q+
Sbjct:   45 VGFVTLIVFKRELHTISFFAGVLLNEGVNWLLKNIVREPRPCAGIHSVHTDYGMPSNHSQLIWFFVVYFFLFLYLRMHQTNNARCVDLLWRHILSIVLLGLAISVSYSRVYLLYHTWGQVLYGGVAGSTFGIIWFFITQELLTPLFPKIAAWPVSEYFLVRDTSLIPNILWFEYTVTRSEARNRQR 230
[Close]
BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Match: A0A5F8GI55_MONDO (Dolichyldiphosphatase n=1 Tax=Monodelphis domestica TaxID=13616 RepID=A0A5F8GI55_MONDO)

HSP 1 Score: 110 bits (274), Expect = 2.090e-23
Identity = 69/202 (34.16%), Postives = 106/202 (52.48%), Query Frame = 1 
Query:  946 GVLKFHLSFSR-YLAVAYLTLVAVRRDLQVFILSVGHLLDLVVNKALKAWFAEARPSG----CINTGHGMPSNHTQYMFFFASFVSLYLWGRVSFCTEAKF-------GLTFAMVGWAAGVGYSRICLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYIKDYSQVSHVLVFEHAALHGGGANAQK 1515
            G L  +LS S  ++ V ++TL+  +R+L       G +L+  VN  +K    E RP G     +NT +GMPS+H+Q+M+FF+ +  L+L+ R+     A+F        L+  +V  A  V YSR+ L  HTW+QV  G   GS     W+    ++L PL P++  WPIS    I+D S + +VL FE+        N Q+
Sbjct:   23 GHLLAYLSLSPIFVIVGFVTLIIFKRELHTISFLGGLVLNEGVNWLIKHIIREPRPCGDTHSMVNTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLVTIAFLVSYSRVYLLYHTWSQVLYGGVAGSIMAVAWFAFTQEILTPLFPRIAAWPISEFFLIRDTSLIPNVLWFEYTVTRAEARNRQR 224
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7813.16764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGQ9_ECTSI5.270e-9081.61Dolichyldiphosphatase n=1 Tax=Ectocarpus siliculos... [more]
A0A6G0XWR1_9STRA3.530e-2638.60Dolichyldiphosphatase n=1 Tax=Aphanomyces euteiche... [more]
K3X1C3_GLOUD3.780e-2537.36Dolichyldiphosphatase n=1 Tax=Globisporangium ulti... [more]
A0A7R9YPD4_DIALT4.410e-2539.08Dolichyldiphosphatase n=2 Tax=Diacronema lutheri T... [more]
A0A3P8WBW3_CYNSE2.900e-2433.69Dolichyldiphosphatase n=2 Tax=Cynoglossus semilaev... [more]
T1IY84_STRMM4.900e-2437.93Dolichyldiphosphatase n=1 Tax=Strigamia maritima T... [more]
UPI0003F060868.220e-2434.43dolichyldiphosphatase 1-like n=1 Tax=Saccoglossus ... [more]
A0A6J2QQC5_COTGO1.340e-2332.62Dolichyldiphosphatase n=17 Tax=Acanthomorphata Tax... [more]
UPI0014711AE01.780e-2332.80dolichyldiphosphatase 1 n=1 Tax=Thalassophryne ama... [more]
A0A5F8GI55_MONDO2.090e-2334.16Dolichyldiphosphatase n=1 Tax=Monodelphis domestic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7813contigL-elsbetiae_contig7813:4178..9304 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01004
Ec32 ortholog descriptiondolichyldiphosphatase
Ec32 orthologEc-04_001210.1
Exons6
Model size2664
Cds size426
Stop1
Taxonomic scopeEukaryota
Seed ortholog score202.6
Seed ortholog evalue1.2e-49
Seed eggNOG ortholog2880.D7FGQ9
Preferred nameDOLPP1
KEGG rclassRC00002,RC00004,RC00014,RC00141
KEGG koko:K01074,ko:K07252,ko:K08658
KEGG ReactionR01004,R01274,R09845
KEGG Pathwayko00062,ko00510,ko00900,ko01100,ko01130,ko01212,ko04142,map00062,map00510,map00900,map01100,map01130,map01212,map04142
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0002084,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006489,GO:0006490,GO:0006629,GO:0006638,GO:0006639,GO:0006643,GO:0006644,GO:0006651,GO:0006665,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006885,GO:0007035,GO:0008150,GO:0008152,GO:0008195,GO:0008474,GO:0008610,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009507,GO:0009536,GO:0009856,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016790,GO:0016791,GO:0016817,GO:0016818,GO:0019538,GO:0019637,GO:0019725,GO:0022414,GO:0030003,GO:0030004,GO:0030148,GO:0030163,GO:0030176,GO:0030641,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0035601,GO:0036211,GO:0042157,GO:0042159,GO:0042175,GO:0042578,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045017,GO:0045851,GO:0046339,GO:0046460,GO:0046463,GO:0046465,GO:0046467,GO:0046486,GO:0047874,GO:0048856,GO:0048868,GO:0048878,GO:0050801,GO:0051452,GO:0051453,GO:0051704,GO:0055067,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0070085,GO:0071704,GO:0090407,GO:0098599,GO:0098732,GO:0098734,GO:0098771,GO:0098827,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576
EggNOG free text desc.dolichyldiphosphatase activity
EggNOG OGsCOG0671@1,KOG3146@2759
EC3.1.2.22,3.6.1.43
COG Functional cat.I
Best tax levelEukaryota
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7813.16764.1prot_L-elsbetiae_contig7813.16764.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7813 5704..8203 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816865.8893414-UTR-L-elsbetiae_contig7813:4177..52911622816865.8893414-UTR-L-elsbetiae_contig7813:4177..5291Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7813 4178..5291 +
1691683872.1604936-UTR-L-elsbetiae_contig7813:4177..52911691683872.1604936-UTR-L-elsbetiae_contig7813:4177..5291Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7813 4178..5291 +
1622816865.9006648-UTR-L-elsbetiae_contig7813:5680..57031622816865.9006648-UTR-L-elsbetiae_contig7813:5680..5703Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7813 5681..5703 +
1691683872.1750925-UTR-L-elsbetiae_contig7813:5680..57031691683872.1750925-UTR-L-elsbetiae_contig7813:5680..5703Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7813 5681..5703 +
1622816865.972054-UTR-L-elsbetiae_contig7813:8203..93041622816865.972054-UTR-L-elsbetiae_contig7813:8203..9304Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7813 8204..9304 +
1691683872.2300286-UTR-L-elsbetiae_contig7813:8203..93041691683872.2300286-UTR-L-elsbetiae_contig7813:8203..9304Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7813 8204..9304 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816865.9115095-CDS-L-elsbetiae_contig7813:5703..57711622816865.9115095-CDS-L-elsbetiae_contig7813:5703..5771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 5704..5771 +
1691683872.1841455-CDS-L-elsbetiae_contig7813:5703..57711691683872.1841455-CDS-L-elsbetiae_contig7813:5703..5771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 5704..5771 +
1622816865.9259684-CDS-L-elsbetiae_contig7813:6118..61961622816865.9259684-CDS-L-elsbetiae_contig7813:6118..6196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 6119..6196 +
1691683872.1930964-CDS-L-elsbetiae_contig7813:6118..61961691683872.1930964-CDS-L-elsbetiae_contig7813:6118..6196Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 6119..6196 +
1622816865.9392173-CDS-L-elsbetiae_contig7813:6587..66811622816865.9392173-CDS-L-elsbetiae_contig7813:6587..6681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 6588..6681 +
1691683872.2018936-CDS-L-elsbetiae_contig7813:6587..66811691683872.2018936-CDS-L-elsbetiae_contig7813:6587..6681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 6588..6681 +
1622816865.9500432-CDS-L-elsbetiae_contig7813:7414..74891622816865.9500432-CDS-L-elsbetiae_contig7813:7414..7489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 7415..7489 +
1691683872.212644-CDS-L-elsbetiae_contig7813:7414..74891691683872.212644-CDS-L-elsbetiae_contig7813:7414..7489Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 7415..7489 +
1622816865.9618392-CDS-L-elsbetiae_contig7813:8092..82031622816865.9618392-CDS-L-elsbetiae_contig7813:8092..8203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 8093..8203 +
1691683872.2213876-CDS-L-elsbetiae_contig7813:8092..82031691683872.2213876-CDS-L-elsbetiae_contig7813:8092..8203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7813 8093..8203 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7813.16764.1

>prot_L-elsbetiae_contig7813.16764.1 ID=prot_L-elsbetiae_contig7813.16764.1|Name=mRNA_L-elsbetiae_contig7813.16764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp
MPSNHTQYMFFFASFVSLYLWGRVSFCTEAKFGLTFAMVGWAAGVGYSRI
CLQCHTWNQVAVGAAVGSGTGALWYLLYSKVLLPLLPQVVKWPISRALYI
KDYSQVSHVLVFEHAALHGGGANAQKGGSGLDPYDFPKKTG*
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mRNA from alignment at L-elsbetiae_contig7813:4178..9304+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7813.16764.1 ID=mRNA_L-elsbetiae_contig7813.16764.1|Name=mRNA_L-elsbetiae_contig7813.16764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5127bp|location=Sequence derived from alignment at L-elsbetiae_contig7813:4178..9304+ (Laminarionema elsbetiae ELsaHSoW15)
GTTTGCGTGTGTTTGTGTTTCATTTGTTCACAGCACTTTCTATTTTTATT
GCGACAGCCTGATGAAATTACACACATTTCGGGCGTGGGGGAGGATATAT
GAGGAGCAGAAGGCGATTCTTATTCGCCGTATACAATAGTCTCTCTACTC
CACAAGGTTTATTTTTTCTTGGAATTGTCCTGCGCTCAATTTCTTATCGG
GATGTTTCTTAAGTTGTCGCCTAGAATAGGCTACATCTCTTAGCCCCATT
TCCACATTTTTCTCGAATTCTGAGCCTCTGTCTCTTAACAGTTTGAAAGG
TAAAACAGTTAATCTAAAATGGAACCTTACCCACATTGAGACGGGACTCC
GTGAGATTCAATCGGTATTCCGTATAGTGACGTAATATTGAGTCGGCCGA
GTAGTTTGTTTCTTGTCAGCAGGCACCCTCTGTTGTTAGAGGGCCTCAGC
AGTAGCTCAAAAGCTCCGTAAATCTTGGCCGAAACATCTTCCCTTCCACT
GCTGTGCTCTCAGCTAACAGATCCCAACCTCCTGAATTGCGGGTCAACAG
CAGTAGCTCATGCCATTAGCTACTGCTGGAAACCCGCAGATGAGTAGGTT
GGGGTCTGCGGTAGCGAGCACGGCAGTGGATGTTTGCTGTCGCTGGTCCA
GATTTGCAGAGCTTTGAGCTACTGCTGCGGCCCTCGGTAACTAGTCCCCA
GCAGCAGATTTGTACATGCCAACTAGCATAATACCCCTCTCCATGGTGCC
CTCTACGAATACGAACATGTCGAATGCATCTTTTCTCAGCCCTCGCTTTT
ATTAGAAGCTAAGCAGTTTAGCCTGGTTTGGTTTTGACTTGGTTTTGGAA
GAGGCAGAGGGGGCCCGATTTGTGTTTGTCTTGTGGATTTTGTGGGGGTA
TGTTACCCACTGTTGTCAGCACCCCCTTACCTTAACTGTCGGCGGGGTGT
TCTGAAATTCCACTTATCGTTCTCCAGATACCTTGCGGTAGCCTACTTGA
CCCTAGTGGCCGTTCGGAGGGACCTGCAGGTCTTCATTCTCTCCGTCGGA
CATCTGCTCGACCTCGTCGTCAACAAAGCCCTCAAGGCCTGGTTCGCCGA
GGCGAGACCGTCAGGTGCCAAATGTTGCGCGGTTGACGAATGTCCGCAGC
TATGTAGGTAGCGTCATTCATGCCCGATGCCACAACATGGCTCACGCAAT
ACACATTGCAACCGCTATTGGTGAGTTGAAAGCTTTGGGGTTTGGGCGCC
TACTGTAGGGCAATGGACGCATGGTTGAGGTAGCACGCCTTGGGGCGTCT
GTATCACAATGGATTTGAGGCGTCGCGATATCAACACCGCTTCTTAGCAC
ATCGCCAGGTCGACATAAGAACGTCAGCTTATTTTTGGATGGTGGCTGGC
CAAGTATTGGACAGGACGCCGAGCGTTCCTGGCGTGTTCACAGACGTCCG
CATCCACTTTGAACCGTCACAGTTGTCGCCCCCCGCCCTTTCACCCTCCG
AAGGGTGCATCAACACTGGCCACGGGATGCCCTCAAACCACACCCAGTAC
ATGTTCTTCTTCGCGAGCTTCGTTTCGCTGTACCTGTGGGGCAGGTGAGA
CTCTGTGCGTTGCTGCCTCGGGGGCTGTCTCCTCTCTCCCTCTTTCCGCT
CTCCAGGCTCTAGACTCTTGGGAGCACGTTTCGAGCCTGTCGCCTCTCGG
GCCCTTGCTGGCAACTTCAAGTTTGTTTTAGCTTCGAGCCAGCAGGGGTC
TCGGCGGGAGGGAACGTATTTCGGTGTGTAGCTCGAGCACCTACTTAGGG
TCTTTTAGACCGTGTGAGTGAACTCGTTGCAGTTGCCCCTCAACGCGTGC
CCATCTTCCTCGGCAACAGGCCTCCCCAACAAACAAACACCTCGCGTTGA
GAGTCGCGCTCACGGTCGCGATCTTCGTGTCCTTCCGGCAGGGTGTCTTT
CTGCACGGAGGCTAAGTTCGGTTTAACGTTCGCCATGGTGGGATGGGCGG
CCGGGGTTGGCTATTCGAGGTGAGCCGACGGTCGTCGCGAATGCTGGCCT
GACAGCCGTGCGTGTGGGGCATTGGCTTCGCTGCAAGCTTCGTGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGCCAGAGAGAGACAGAGAGAGACAGAGAG
AGAGAGAGCCAGTGCGGTTTCGGAAAGCTTCGCTTTGGAAGCCCAATCGC
TCTCCTCTCGTCGTTGAGGATTATGACGGCGAGAGAATGTCGGAAGATTC
GTCTCGTTTCTTGATTCCTCGTGTCAAGCTCGGCACTTGGGTGCTGTTTT
CCGCTCCCGAAGCGCTGAGCTGCCGTTTAGCGGCTCGACGGCTTCCCGAT
TCGAACCAGTCGCCACCGTCCCTGCTCTGATTTAGCCGACCTCGAAACTC
CCGATGACAGAATTTGCCTTCAGTGCCACACCTGGAATCAGGTGGCCGTG
GGCGCCGCTGTTGGCAGCGGTACCGGGGCGTTATGGTATCTTTTGTACTC
CAAGGTGAGTTTGATATTTTTTGGCAGCTCGTTTTTCGGGTTGACATGTG
GTATCGTGCAACCCTGCCACGAAACACTATGTTGGTCCAGCCAAAAGAGA
GAAAACCAAGCTTCAATGCGTGTATTGTAGCCTTAAGAACACGTGCAGGC
AGACGGAACAAGGGTGGCATGGGATCGAGCTTTTCTTACAAGCGAACTAT
GTCTCCAGCGACAAGTTTTTTCTCTTCATTTTTACATACATAGCTTGCCA
GCGATGTGTGTGTGTGTTTTTTTCCCGCCCATTATTGGCATATTTGTTGT
CTGCCCCACTGGCCCCCCCCCTCCAATACGACCAGCTATATCACCCAACT
GGGGTGGGTTGGACCCCCTCCTGCGGTGTGTACCAGCTCAGCGATATATC
TGCTTCTTCTACTTTGCTGTACTCCATTCATATCTTCGTTGCTTCGAAGT
CGCGTCAAATTGGGGCAAGCATGGTTGCTCCGATCATCATGGGGGTGTGG
CCAGTGGAAAACCACGCCGGTGTCGTTTTGGTCGGCAACCTGCGCCAGCG
AGACCACATGCAAAGTACCACTTTGTCTGGACGACCGACAGCGGACCGTT
TACCCTGAAGGCCGTCTATGTATTCGGTGTTACATATACCGCACACCCGG
CCGCTCATCTTGCTTCGAGAGGGTGCTACATATATCGCTATTGTGCTGCC
GGCTTTCTTGCTCGCACGTGTTGCCTCTCTTCGGCAGGTTCTGTTGCCAC
TGCTGCCGCAAGTGGTGAAGTGGCCAATTAGCCGGGCGCTCTATATCAAG
GACTACTCGCAGGTGAGAACCCGACTTGTGTCAGTTGGGGCGCATGTTCG
TGTGAAGAAGTGAGTCAGCTGGTTGACAGATATGTGGACGGTTTCATGTC
CCGTAGATAAAAATGTGCTGGTGGACATGGTATGAGAGCCTTCTGGATAT
GAGTTGCGGGGCCCCGTTCGATATGTTTTGGTCTCACTTCTCCTTTCTCT
GTCTCTCCTAATGTCTACCCTACAAGCTATTACATGGGGTTAACAACATC
CTCGGGTCTTTGAAGCTCAGTACAGAACATATGCCGAACAGCGCATTGGC
GCAACACATGATATCTACGCGCAAAGAGTTGTGGAACGTGGCGTTTGTTT
CGGAGGTAGCCCGGATGTTTTAACTCATCCGCGTTAGGGAGAATTTATTT
TTGCATACGAGCCCACCAAGCTGCAGCCGTAGTGCATCCGTCAGGAAAGA
TAGTTCGTCGGTCGGCGATTTGTTTTGACACATTAGCTGCAATGCCTGTC
AAGATATCTCCCAGTTTTTGCTGTTGCTGCTTGTGCACAGTTATCGCCGC
CAAAATTTGGTCGGTCGAAGATGGCTCGCCTGACGTTCGGTTCGTGTCCC
GTCCTGTTTTCCCAGGTTTCACACGTGCTCGTGTTCGAGCACGCGGCCTT
GCACGGCGGCGGTGCCAATGCGCAGAAAGGCGGATCGGGATTAGATCCGT
ACGACTTTCCGAAAAAGACCGGCTAGATAAAGCTGTGCTGGAAGGGGGAG
CGGCGGTGGACTGTTCGTATACCGATGGTGTATTTGGTATGCCCCAGCAA
CTGGGCGCTAGACCGCTGCTTGACGCACATCAGAGCAGCTCGGGGAAGAG
ACCGAAGAGGCCTACATGTTCGAAAGGGCTTCCTGAATCTATGGTTGCTG
TCTAAGAACAAAATATTCAACGAGCAGGCCTATGACGTTAGGGTTTATAA
CGGTGAGAGGAAAGATTGCGAAGGCGGGGGTTCCCTGTAGCAAAGCGAGG
TACCGCTGTGTTTGACTCTCTGTCTTACCTGCTGCGTGTGACTGTGCACG
CAGGCCCATAGAATGGCAGAAAGCGAGATGGAAAGATGCCTGCGTTGGTG
GTCTTCTATAAGCGACCACCGATATGCTCGGTTTGTATCGAACTTTCATG
GGTGTGCGTGCGTGCACACCACATGATAGGCGATCTAGTAAAGTGAGAAC
ACATCGATATATAGTAGATCGTATCTGTATGGCGCGTTTCTGCAACCTCG
TGAGGAGCACCATCATGTTTCGGCTCGAAGTGTGTATCGGTCGTGTTGGC
TCTCATGAATATCCCCCGTTCTGCATAACGAAGGGAGAATTCCGTCCAAT
TCCTTTCGCCATGAGTGTGGCATGTTTCTGCTGCTCACACGTGTTTTTTT
GGGAGAGACATATCCTAGTTACGTGGCAAATACGACATGCACATGGAAGT
ATTAGGCGCTTGACGTCCTGTAACGGTTAATCCAGCGCACGTGCGAGTAT
CGACAAGTCGCGAAGAATCACCACTGGTAGGGGGCACATACATATCGATA
CCGCCGTGTCCGAGCACCGTTTAAACGGCACACTCAGCGTGAGAGACCAC
GAAGGCTTACGATCAACTCGTATGAAGCAATCTACTCTTCACTGCCGCGG
GTGAGAATCCTACCGGATCTCGGACACGGATAGATAGTCTAGATACCGAC
CACATGCATACATGTAGTAGGCACTTTTGCCGGAGTTGAGAGGATGGTTT
TGCAGGAAACCTTTTACACGGAAGAGAGAAAGGAAAAAGGTGCCCGCAGT
TTCTCATTGGTAAAAAATTTGACCGGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7813:4178..9304+

>mRNA_L-elsbetiae_contig7813.16764.1 ID=mRNA_L-elsbetiae_contig7813.16764.1|Name=mRNA_L-elsbetiae_contig7813.16764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig7813:4178..9304+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCCTCAAACCACACCCAGTACATGTTCTTCTTCGCGAGCTTCGTTTC
GCTGTACCTGTGGGGCAGATGCCCTCAAACCACACCCAGTACATGTTCTT
CTTCGCGAGCTTCGTTTCGCTGTACCTGTGGGGCAGGGTGTCTTTCTGCA
CGGAGGCTAAGTTCGGTTTAACGTTCGCCATGGTGGGATGGGCGGCCGGG
GTTGGCTATTCGAGGGTGTCTTTCTGCACGGAGGCTAAGTTCGGTTTAAC
GTTCGCCATGGTGGGATGGGCGGCCGGGGTTGGCTATTCGAGAATTTGCC
TTCAGTGCCACACCTGGAATCAGGTGGCCGTGGGCGCCGCTGTTGGCAGC
GGTACCGGGGCGTTATGGTATCTTTTGTACTCCAAGAATTTGCCTTCAGT
GCCACACCTGGAATCAGGTGGCCGTGGGCGCCGCTGTTGGCAGCGGTACC
GGGGCGTTATGGTATCTTTTGTACTCCAAGGTTCTGTTGCCACTGCTGCC
GCAAGTGGTGAAGTGGCCAATTAGCCGGGCGCTCTATATCAAGGACTACT
CGCAGGTTCTGTTGCCACTGCTGCCGCAAGTGGTGAAGTGGCCAATTAGC
CGGGCGCTCTATATCAAGGACTACTCGCAGGTTTCACACGTGCTCGTGTT
CGAGCACGCGGCCTTGCACGGCGGCGGTGCCAATGCGCAGAAAGGCGGAT
CGGGATTAGATCCGTACGACTTTCCGAAAAAGACCGGCTAGGTTTCACAC
GTGCTCGTGTTCGAGCACGCGGCCTTGCACGGCGGCGGTGCCAATGCGCA
GAAAGGCGGATCGGGATTAGATCCGTACGACTTTCCGAAAAAGACCGGCT
AG
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