mRNA_L-elsbetiae_contig7811.16763.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7811.16763.1
Unique NamemRNA_L-elsbetiae_contig7811.16763.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: D8LNJ3_ECTSI (NADH dehydrogenase (Ubiquinone) (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ3_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 9.200e-87
Identity = 149/204 (73.04%), Postives = 166/204 (81.37%), Query Frame = 3 
Query:  339 RIVVLTCGRN--TKAREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLLYLQAACKGVDFESKSLRCREVFKGTEHDVDYDYLVIATGAQNNTFGVPGVNEENHVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE*EQALELGLSVAQRH*Q*QYPG*HDAVCLLVLQA 944
            ++V+L  G      ARE+DK+KY+V VISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGL YLQA+   VDF+SK+LRC+EVFKGTEH+VDYD LVIATGAQNNTFGVPGV+EENHVFFLKQLGDARNIRNRLLECFERAASPFISE ERSRLLSFVVVGGGPTSIE    L   L    +     YP     V + +++A
Sbjct:   19 KLVILGTGWGGFRVAREVDKKKYDVTVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLQYLQASVLSVDFKSKTLRCQEVFKGTEHEVDYDSLVIATGAQNNTFGVPGVSEENHVFFLKQLGDARNIRNRLLECFERAASPFISEEERSRLLSFVVVGGGPTSIEYAAELHDFLRTDVKR---WYPDLEHKVSVHLVEA 219
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A6H5JNU4_9PHAE (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU4_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 8.080e-83
Identity = 143/190 (75.26%), Postives = 157/190 (82.63%), Query Frame = 3 
Query:  375 AREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLLYLQAACKGVDFESKSLRCREVFKGTEHDVDYDYLVIATGAQNNTFGVPGVNEENHVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE*EQALELGLSVAQRH*Q*QYPG*HDAVCLLVLQA 944
            ARE+DK+KY+V VISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGL YLQA+   VDFESK+LRC+E FKGTEH+VDYD LVIATGA+NNTFGVPGV+EENHVFFLKQL DARNIRNRLLECFERAASPFISE E SRLLSFVVVGGGPTSIE    L   L    +     YP     V + +++A
Sbjct:   34 AREVDKKKYDVTVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLHYLQASVLSVDFESKTLRCQEAFKGTEHEVDYDSLVIATGAKNNTFGVPGVSEENHVFFLKQLSDARNIRNRLLECFERAASPFISEEEGSRLLSFVVVGGGPTSIEYAAELHDFLRTDVKR---WYPDLQHKVSVHLVEA 220
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A7S3GUG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUG2_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.410e-60
Identity = 103/170 (60.59%), Postives = 133/170 (78.24%), Query Frame = 3 
Query:  339 RIVVLTCG--RNTKAREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLLYLQAACKGVDFESKSLRCREVFKGTEHDVDYDYLVIATGAQNNTFGVPGVNEENHVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE 842
            ++VV+ CG      A++IDK KY V ++SPRNHFLFTPLLPST VGTLEFRCIQEPVRTI GL Y QA+C  +D+  K + C EV+K ++  ++YDYLV+A G++ NTF VPGV+    +FFLKQL +AR+IRN+L+E FERA+ P I+  ERSRLL+FVVVGGGPT++E
Sbjct:   30 KVVVIGCGWAGYRFAQDIDKSKYHVSLVSPRNHFLFTPLLPSTAVGTLEFRCIQEPVRTIPGLHYAQASCDDIDYIHKKIHCTEVYKMSKFSMEYDYLVLAPGSETNTFNVPGVDGNPRIFFLKQLHEARSIRNKLIESFERASLPSITPQERSRLLTFVVVGGGPTNVE 199
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A835ZFC4_9STRA (Pyridine nucleotide-disulfide oxidoreductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC4_9STRA)

HSP 1 Score: 217 bits (553), Expect = 8.130e-60
Identity = 115/205 (56.10%), Postives = 148/205 (72.20%), Query Frame = 3 
Query:  339 RIVVLTCG--RNTKAREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLLYLQAACKGVDFESKSLRCREVFKGTEHDVDYDYLVIATGAQNNTFGVPGVNEENHVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE*EQAL-ELGLSVAQRH*Q*QYPG*HDAVCLLVLQA 944
            +IVVL  G    + AR +D +K++V ++SPRNH+LFTPLLPSTTVGTLEFR IQEP R+IKG+ Y QA    +D  +K ++C+E F G E  V YD LV+A GA  NTFGVPGV+ +NHV+FLKQL DAR IRNRL+ECFERA++PF S AE++RLLSFV+VGGGPTS+E    L +     A+R     YP   D V + +++A
Sbjct:   25 KIVVLGSGWAGYSFARHLDYKKFDVHLVSPRNHYLFTPLLPSTTVGTLEFRAIQEPARSIKGVHYYQAEATELDPATKQIKCKEAFTGMEFMVPYDKLVLAMGATTNTFGVPGVDPKNHVYFLKQLTDARMIRNRLVECFERASTPFCSAAEQTRLLSFVIVGGGPTSVEFAAELHDFVRGDAKR----LYPDVADKVSVTLVEA 225
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A7S3YYD9_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYD9_9EUKA)

HSP 1 Score: 211 bits (536), Expect = 1.140e-56
Identity = 111/173 (64.16%), Postives = 128/173 (73.99%), Query Frame = 3 
Query:  339 RIVVLTCGRN--TKAREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLL-YLQAACKGVDFESKSLRCREVFKGTEHDVDYDYLVIATGAQNNTFGVPGVNEEN--HVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE 842
            R+VVL  G      AR++DK+KY+V VISP NHFLFTPLLPST VGTLEFRCIQEPVRTIKGL  Y QA  + +D + K + CR++FK  E DV YDYLVIA GA+ NTFG PGV E     V FLK L  +R IR+R+LECFERA+ P IS  ER RLLSF+VVGGGPTS E
Sbjct:   42 RVVVLGSGWGGFQVARDLDKDKYDVRVISPANHFLFTPLLPSTAVGTLEFRCIQEPVRTIKGLREYYQAKARSIDTKEKVVACRDIFKEREFDVPYDYLVIACGAKTNTFGTPGVEEREGQQVQFLKHLYHSRKIRHRILECFERASEPMISNEERKRLLSFIVVGGGPTSCE 214
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A6U2FK17_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2FK17_HEMAN)

HSP 1 Score: 208 bits (529), Expect = 1.830e-55
Identity = 109/177 (61.58%), Postives = 126/177 (71.19%), Query Frame = 3 
Query:  327 QPNLRIVVLTCGRN--TKAREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLLYLQAACKGVDFESKSLRCREVFKGTEH-DVDYDYLVIATGAQNNTFGVPGVNEEN--HVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE 842
            Q   ++VVL  G      AR +DK KY+V +ISP NHFLFTPLLPSTTVGTLEFRCIQEPVRTIKG  +LQA  K +D  SK + C+++FK      V YDYL++A G++ NTF  PGV E     VFFLK L  AR IRNR+LECFERAA P IS+  R RLLSFVVVGGGPTS E
Sbjct:   56 QSKKKVVVLGTGWGGFQVARSLDKSKYDVQIISPSNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGTHFLQAKAKSIDLNSKVIECQDIFKAAHRFSVSYDYLILAVGSKTNTFNTPGVAEREGKEVFFLKHLYHARQIRNRILECFERAAVPGISQEMRQRLLSFVVVGGGPTSCE 232
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A7S1U2V6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2V6_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.990e-55
Identity = 99/157 (63.06%), Postives = 119/157 (75.80%), Query Frame = 3 
Query:  375 AREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLLYLQAACKGVDFESKSLRCREVFKGTEHDVDYDYLVIATGAQNNTFGVPGV-NEENHVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE 842
            A+ IDK K+ V V+SPRNHFLFTPLLPST VGTLEFRCIQEPVRTI+G+ YLQA  + +D   K+LRC + ++    ++ YD LV+A G   NTFGVPGV +  N+VFFLKQL  AR IRNR++ECFERA  P  SE ER RLL FV+VGGGP S+E
Sbjct:   65 AKNIDKAKHRVTVVSPRNHFLFTPLLPSTAVGTLEFRCIQEPVRTIRGVRYLQAKARDLDVAGKTLRCEDTYRRERFELAYDRLVLAVGTMTNTFGVPGVAHGRNNVFFLKQLSHARAIRNRIVECFERAGYPSASEDERRRLLHFVIVGGGPISVE 221
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A8J2X5K1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5K1_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.690e-54
Identity = 114/207 (55.07%), Postives = 138/207 (66.67%), Query Frame = 3 
Query:  339 RIVVLTCG--RNTKAREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGL-LYLQAACKGVDFESKSLRCREVFKGTEHDVDYDYLVIATGAQNNTFGVPGVNEENH--VFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE*EQALELGLSVAQRH*Q*QYPG*HDAVCLLVLQA 944
            R+VVL  G   N  AR +DK K++V V+SP NHFLFTPLLPST VGTLEFR +QEPVRTIKGL  Y QA  + +D E++ + CR++F G   D++YD+LVI+ G + NTF VPGV +E    VFFLK L  AR IR+R+LECFERAASP  SE ER  LL FVVVGGG TS E    L   L    R     YP   D V L +++A
Sbjct:   20 RVVVLGSGWGGNKVARYLDKTKFDVRVVSPANHFLFTPLLPSTAVGTLEFRAVQEPVRTIKGLGKYHQAKAQKLDVENRIVNCRDIFSGDTFDINYDFLVISAGCKTNTFAVPGVTQEQQSTVFFLKHLYHARRIRDRILECFERAASPVASEEERRDLLHFVVVGGGATSCEFATELSEFLEKDVRK---WYPDLADLVSLSIVEA 223
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A410JA44_9CILI (Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Philasterides dicentrarchi TaxID=282688 RepID=A0A410JA44_9CILI)

HSP 1 Score: 204 bits (518), Expect = 2.440e-54
Identity = 109/206 (52.91%), Postives = 139/206 (67.48%), Query Frame = 3 
Query:  339 RIVVLTCGRN--TKAREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLLYLQAACKGVDFESKSLRCREVFKGTEHDVDYDYLVIATGAQNNTFGVPGVNEE--NHVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE*EQALELGLSVAQRH*Q*QYPG*HDAVCLLVLQA 944
            ++V+L  G      AR ID+++Y+V +ISPRNHFLFTPLLPST+VGTLEFRCIQEP+RTIK + Y+QA    +DF+ + + C++ FK    DV YD LVIA G++ NTFG PGV++     VFFLKQL  AR IRNR++ECFERAA P I   E+ RLLSFVVVGGGPTS E    L   L          YP   + V + +++A
Sbjct:   24 KVVILGAGWGGFNVARSIDRKQYDVTLISPRNHFLFTPLLPSTSVGTLEFRCIQEPIRTIKNMHYIQAKANNIDFQQQIICCQDAFKKEVFDVKYDKLVIAVGSKTNTFGTPGVDKYLGESVFFLKQLYHARMIRNRIIECFERAAMPHIPLNEKKRLLSFVVVGGGPTSCEFTSELHDFLYYDMPR---LYPDLQEYVQVHLIEA 226
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BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Match: A0A816GZX1_9BILA (Hypothetical protein n=10 Tax=Rotaria TaxID=231623 RepID=A0A816GZX1_9BILA)

HSP 1 Score: 199 bits (507), Expect = 6.530e-53
Identity = 103/171 (60.23%), Postives = 125/171 (73.10%), Query Frame = 3 
Query:  339 RIVVLTCGRN--TKAREIDKEKYEVVVISPRNHFLFTPLLPSTTVGTLEFRCIQEPVRTIKGLLYLQAACKGVDFESKSLRCREVFK-GTEHDVDYDYLVIATGAQNNTFGVPGVNEENHVFFLKQLGDARNIRNRLLECFERAASPFISEAERSRLLSFVVVGGGPTSIE 842
            +++VL  G       R ++++KY+V +ISPRNHFLFTPLLPSTTVGTLEFRCI EPVRT+  L Y QA C  +  ++  +RCR+ F    E  +DYDYLV   GAQ+NTF VPGV  E H FFLKQL DAR IRNRL+E FERA++ FISE ER  L +FV+VGGGPTSIE
Sbjct:   29 KVIVLGAGWGGFQFVRYLNRKKYDVTLISPRNHFLFTPLLPSTTVGTLEFRCIIEPVRTLSKLQYYQAYCDEISHKTNQIRCRDYFNTNKEFSLDYDYLVCCHGAQSNTFKVPGV--EEHAFFLKQLSDARAIRNRLMELFERASNRFISEEERKALTTFVIVGGGPTSIE 197
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7811.16763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNJ3_ECTSI9.200e-8773.04NADH dehydrogenase (Ubiquinone) (Partial) (Fragmen... [more]
A0A6H5JNU4_9PHAE8.080e-8375.26Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A7S3GUG2_9STRA1.410e-6060.59Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A835ZFC4_9STRA8.130e-6056.10Pyridine nucleotide-disulfide oxidoreductase-domai... [more]
A0A7S3YYD9_9EUKA1.140e-5664.16Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A6U2FK17_HEMAN1.830e-5561.58Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1U2V6_9STRA1.990e-5563.06Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J2X5K1_9STRA1.690e-5455.07Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A410JA44_9CILI2.440e-5452.91Pyridine nucleotide-disulfide oxidoreductase n=1 T... [more]
A0A816GZX1_9BILA6.530e-5360.23Hypothetical protein n=10 Tax=Rotaria TaxID=231623... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7811contigL-elsbetiae_contig7811:813..6228 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score72.4
Seed ortholog evalue1.5e-10
Seed eggNOG ortholog38727.Pavir.Bb03078.1.p
KEGG koko:K17871
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Pyridine nucleotide-disulphide oxidoreductase
EggNOG OGs37I8M@33090,3G735@35493,3IEP5@38820,3KMJ4@4447,COG1252@1,KOG2495@2759
Ec32 ortholog descriptionNADH dehydrogenase (ubiquinone)
Ec32 orthologEc-01_000420.1
EC1.6.5.9
COG Functional cat.C
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons8
Model size2280
Cds size333
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7811.16763.1prot_L-elsbetiae_contig7811.16763.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7811 4212..5692 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816865.6489851-UTR-L-elsbetiae_contig7811:812..12961622816865.6489851-UTR-L-elsbetiae_contig7811:812..1296Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 813..1296 +
1691683872.0028195-UTR-L-elsbetiae_contig7811:812..12961691683872.0028195-UTR-L-elsbetiae_contig7811:812..1296Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 813..1296 +
1622816865.6657145-UTR-L-elsbetiae_contig7811:1728..17901622816865.6657145-UTR-L-elsbetiae_contig7811:1728..1790Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 1729..1790 +
1691683872.0187807-UTR-L-elsbetiae_contig7811:1728..17901691683872.0187807-UTR-L-elsbetiae_contig7811:1728..1790Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 1729..1790 +
1622816865.6791582-UTR-L-elsbetiae_contig7811:2347..24811622816865.6791582-UTR-L-elsbetiae_contig7811:2347..2481Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 2348..2481 +
1691683872.0292044-UTR-L-elsbetiae_contig7811:2347..24811691683872.0292044-UTR-L-elsbetiae_contig7811:2347..2481Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 2348..2481 +
1622816865.6948311-UTR-L-elsbetiae_contig7811:2865..37601622816865.6948311-UTR-L-elsbetiae_contig7811:2865..3760Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 2866..3760 +
1691683872.040454-UTR-L-elsbetiae_contig7811:2865..37601691683872.040454-UTR-L-elsbetiae_contig7811:2865..3760Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 2866..3760 +
1622816865.7077703-UTR-L-elsbetiae_contig7811:4175..42111622816865.7077703-UTR-L-elsbetiae_contig7811:4175..4211Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 4176..4211 +
1691683872.0503504-UTR-L-elsbetiae_contig7811:4175..42111691683872.0503504-UTR-L-elsbetiae_contig7811:4175..4211Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 4176..4211 +
1622816865.7587755-UTR-L-elsbetiae_contig7811:5692..57051622816865.7587755-UTR-L-elsbetiae_contig7811:5692..5705Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 5693..5705 +
1691683872.09258-UTR-L-elsbetiae_contig7811:5692..57051691683872.09258-UTR-L-elsbetiae_contig7811:5692..5705Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 5693..5705 +
1622816865.7724295-UTR-L-elsbetiae_contig7811:5905..62281622816865.7724295-UTR-L-elsbetiae_contig7811:5905..6228Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 5906..6228 +
1691683872.1051037-UTR-L-elsbetiae_contig7811:5905..62281691683872.1051037-UTR-L-elsbetiae_contig7811:5905..6228Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7811 5906..6228 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816865.7199507-CDS-L-elsbetiae_contig7811:4211..42711622816865.7199507-CDS-L-elsbetiae_contig7811:4211..4271Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7811 4212..4271 +
1691683872.0624986-CDS-L-elsbetiae_contig7811:4211..42711691683872.0624986-CDS-L-elsbetiae_contig7811:4211..4271Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7811 4212..4271 +
1622816865.7321272-CDS-L-elsbetiae_contig7811:4822..49121622816865.7321272-CDS-L-elsbetiae_contig7811:4822..4912Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7811 4823..4912 +
1691683872.0716412-CDS-L-elsbetiae_contig7811:4822..49121691683872.0716412-CDS-L-elsbetiae_contig7811:4822..4912Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7811 4823..4912 +
1622816865.7437508-CDS-L-elsbetiae_contig7811:5509..56921622816865.7437508-CDS-L-elsbetiae_contig7811:5509..5692Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7811 5510..5692 +
1691683872.081635-CDS-L-elsbetiae_contig7811:5509..56921691683872.081635-CDS-L-elsbetiae_contig7811:5509..5692Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7811 5510..5692 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7811.16763.1

>prot_L-elsbetiae_contig7811.16763.1 ID=prot_L-elsbetiae_contig7811.16763.1|Name=mRNA_L-elsbetiae_contig7811.16763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp
MGSFDDKLISYTTRLLENRKVEVLLNTSVKSVGPTDCTLGDGRKLPFGLM
VWSTGLAPTELVSSMDGLEKERGRIKVDGRLRVPGRGRRVRYGRCRGQPG
KSIGASRSSR*
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mRNA from alignment at L-elsbetiae_contig7811:813..6228+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7811.16763.1 ID=mRNA_L-elsbetiae_contig7811.16763.1|Name=mRNA_L-elsbetiae_contig7811.16763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5416bp|location=Sequence derived from alignment at L-elsbetiae_contig7811:813..6228+ (Laminarionema elsbetiae ELsaHSoW15)
AATACCCTCGGACAGGACACGACGCAGGTCGAGTGTACGAACAACTAACA
AACAACATACAAAACAAACACACACAACATAACCCCTGACAAATAAGTCA
CTCCTCCGGTGGTGCAAGCTGATACAACAACGATGGGAGGGGGAAAATTA
GTCAAGGATTGGTTCAGTCAGGACAGTGCCGCACATCTGCTTCCGCCTCC
GCCCTCTGGATTTCAAAGAGAAAAAAACAGAACGAGCGGTCTATTCCCCG
CAACTTCAACTACGTGGTGCACCCTTTAGCACACACATATTGTTATAGAC
AGACTCCTGATCACTTGTCCTGATGCCAACCCAACCTAAGAATTGTTGTG
CTTACCTGCGGTCGAAACACAAAAGCCCGCGAGATCGACAAGGAGAAGTA
CGAGGTCGTGGTTATCAGCCCCCGCAACCATTTTCTCTTCACCCCGCTCC
TGCCGTCCACTACTGTCGGCACGCTCGAATTCAGGTGAAGTTTGATACCT
GCAGCGGCGGACAGTTTATCGGGAAAGTGTAGACTGCGATGTACATTTTT
TGCATTTTTGCGGCGAAGCGATGGTGCAAGCAACGTTAATGTTAGAACTT
GCTAAATAGCCGTTTGGTATGCGCAGGATGAGTCGATATAGGTTTCGGGC
TCACTGGCGGGTGTCATTGCTACGGCCCTTCGGTCTGATCTAGCAGACTA
CTACCCCTAGTGAAGATAGCCCCGGCGGTATTCGTGAGATGTCTCTACAT
CGTCTGTCTAATTCGGAAGGAAGAGCAACAGTATATAGTCAGTGTTGGGC
ACTGAAATAAACGCGCAACGTTGTAACGGTTCTTGCTTCAAGCCGCGTGC
TACCCTCGCGTCACGGCACGCTCTCCTCGCTCGGGACCAGACTGATGTGT
CATTTCATGCATGCAGGTGCATACAAGAGCCTGTCCGCACAATTAAAGGG
CTACTGTACCTGCAGGCGGCCTGCAAGGGTGAGGACCGTGTCCATGGTGT
CTCTGTTTAGTAATATCCCATACTATACACTTCTCCATTTAGGACGATTT
CGTTGTGTTTCTATTGTCCTTTCTGCCACCACCCGGTAGCCCCAGGTATC
TGCGAACCGTTTGGAGACAATCTCACTGACGACATGTTTGTTTTGGCTCA
CGTTCTCACGTGTCAACCAACCTCTATGGCTTGTCAGTAGATATATATAT
ATTTTCGGTCCCAGCCTTGAAGAATACGCAGAGAGGCGTCGCGCGCTGAC
TTGAGAGGTATCTTTGTTTGCCTGGAACACCTTAGATAGCATTTACAAGG
GCCTTGAGGTGTGCTCAAAACGGGTTCACCCCGCACTTGTGTCGATATCC
CGTAAGGCTGCTGCTGTTGCTAATGTTGCTGATGCACCGCTCTTTTGGTT
CAAGATATGCTCCGTGCATGTGCACGTTTACATCTGGTTCTACGTCATGT
CCCAAAATTACATCCCTGTTCTCTGTCGCTTGCCGACATTCAACGATTTG
TCCCCCCCCCGTTTCTTCTCTTTGCTTGGCAACAGGCGTAGACTTCGAGT
CAAAAAGCCTGCGGTGCCGCGAGGTGTTCAAGGGCACGGAACACGATGTC
GATTACGACTACCTCGTCATCGCCACGGGGGCCCAGAACAACACCTTCGG
CGTGCCCGGCGTTAACGAGGTAAACAGATTTGTCTCTCGCCTTTCTGAGA
TAAAACAGAAACCTTTGCCACGAAAGAGAAACGCTCGCCGCAGGCAGGCA
AATTCCAGGGGGACTTATTGTAACGTGTCTTGGATCCCTTACAAACAGAA
GACTCTGGATGATGTAATTCCGAGCGGTAAGCAACACCCATGGTTAAAGA
AATTACTTGGTAATCATGTCGAAGACTTAGCGGGCGGTCGTTACGGTCGT
TATTTGTTTTGCCAACCATCGCCCCCAGTGAAGCAGTGCATAGACAACAA
AAATACTTGTCATAATTCTCGTCGCAAACCCTCCGTCTTTGGCGTCTGTG
TGTTGTGTGTGTGTGTGTGTATGTGCCCTTTATGTGTTCGGTGGTGTTTC
AAGGAGAACCACGTGTTCTTCCTGAAGCAGCTCGGCGACGCCCGTAACAT
CCGCAACCGCCTGCTCGAGTGCTTCGAGAGGGCCGCGAGCCCCTTCATTT
CGGAGGCTGAACGATCGCGGCTGCTGTCGTTCGTCGTTGTCGGTGGTGGG
CCGACTTCCATCGAGTAAGAGCAAGCACTCGAGCTAGGTCTGTCTGTGGC
ACAACGACATTGACAATAGCAGTATCCGGGTTGACACGACGCCGTTTGTT
TGCTCGTGTTGCAGGCACAGCGCTTTGGTGACTACTATATCCCAAGAGAT
AAATAATACCCAGCAACGCACAGAGAGGGGGACTGATTTGATTTTGTCAC
GTGTAAGCCCGATCGGTTGATGAAATCTCAGTTGAGCCTCGATCATAGTT
CTGGGCTGAGAGCGAAGCCAGGTAAACTACGGCCTTTCTGGCTTCCCAAG
CTCGAATTGGCCCGCAACAAACCAAGCACCACTTTTGAACGGCGCGTCTC
ATGAACACCGAATGAGATCGTGGCAGAGCTATCCTGTGGCAGTGGGCCTT
GTCTTGGCTGATTGTTTGTGGTTGTCGGCGGACGGTCGAGTTCAACCGTG
CCAGCAATGTACCCTAAGGTGGTGCATCCACTCAACAAGCACCGATGGAT
TGATTCCTGTCTCAGTTTTATTCTAAGTCAGAACGGGGGTTGTAGACGAC
ACAATGCGAGCTTTATGGAAGCACTGCCTGAGAAGAAAGAAGTGGTGGTC
AAACCAAAACCCATTTTTTTTTTAAGTACTTGCCCAAGCTGAATCAGTTC
GAGCGGCGTAACTATCACTCCCCCGCAGGTACGCCGCCGAGCTACACGAC
TTCTTGACGAGCGACGTCAAAATATGGTACCCGGACTTACAGAACAAGGT
GACTGTAGTAGTGGCAGTGATGTGTTGGCTGTGGCGATGGTATCGGCATA
GTTGCCGTAGTTTTTCCCCCCTGATTGCTATCTATCGGTGTTGGTGGTGA
TATACCACGCCAGCAGTTGACAGATGTCGGCACGCTTCACCGGTGTTTTC
TGTGCCAAAAATATCGGTGGCTCCGCTACAGTAACCGTCTAGTTTATGAT
GCCAATTTCCGGTTCGCTGGAACGGGTTAGCAAGTGCGTTCGTGGTTCGG
TCGTTGCACTTGGGTAATTTGCCGGTGACGTGGATACGGTTGAATCTGTC
TTTGTTTTCTTGCTCTCCCCACACCCGGCTCGTGTCTTCTGTTCCTTTTT
TATTTGTTTTATTTTGCGGACCTGCATCAACGCGACGTGTTGTGCTGTTG
TTTGACATGCAAGGTGTCCGTGTACTTGGTGGAAGCCAGCGGCCACATCA
TGGGCAGTTTCGACGACAAGCTCATCAGCTACACAACGCGTCTCTTGGAA
AACCGCAAGGTCAGCCAGCCCCAGAGGTGGCAGGCTTCTTTCTATTCGAC
CTATTTATTTAGGGCTGTAGCGTGTTTAACATGAACGCCAAATTGTCTGA
ATGTTTCCCTGCATTCAGCGCTTCGTCGTCGATGGTCTAGTTGTTGGATG
CGGTGTCCTGCGTAAAATACACACGAACTGCTCGTACCCGCGATACCGGC
GACTCAGGTGCATCCCCTTCACCGACGCTTGTACATACATACGTTATTTC
TCGAACCCGACCGGTTCCAATCGACTCTCCCCTATTTTTACACGCGCGCC
CGGGGCACGATCAATCAGGGGGTTGGGACGTTGGAATCTGCCTCGCCTCT
TTTTCGACCTCTCTCGTGCTGTGTCGAGAATGGCAACGGCGTAGAGAGTG
CCTCTCTTTCGCGCTGTTCTGTTATGAGGAGGAGCGTCGCCCCAGTCTCG
CCCAAGTGCTCTGATGTACCTATCCTTGGTCTGAAGACTAAGATGAACGA
GCAATGACCGCCCCCCCTACCCGCTCCACGCCCGTTTTGCGTTGCAAACG
CGTTCTCAAGGTGGAAGTTCTGCTGAACACCTCTGTGAAGTCGGTCGGGC
CGACGGATTGCACGCTTGGCGACGGCCGCAAGTTACCCTTCGGATTAATG
GTAAGTTTACCCTCGGGTTGGTCATACTAGGTAGGTTTTGGGCGTCCGGA
TGGGGTGCTTGATGCCAGTGCCGTTAACCCCCTCTGGGAATACGATCCCT
CAGGCTTGGAATTAGAACATGTTTTAACTCGGTTTTTAGGTTTTAATGCT
GGGGTTTCCATTGGACGAATGTGGCAGGGTCATCTCCAGGTTACGGACGA
GTTTGCGTTGTAGGGGTATGTGGTTGTGCCCATTTCCCCGCTGATTTCGC
CCCACAGGCCACTCGAGAGCAAAGTTCGCTCTCAGGGAAAGCGGGAACAC
GGGTCGCGATCACCGCTTTTCCGCTGCAAATCAATGATAGAAAAGCCGCG
AATGCACGGCGTGAAAGCCCCTTGCCAGTAGATGTCAGCACTCGACATCA
CAGAAGAACTACAAAGAAGCTGTCCAGCCAACTTGCTGCTGCGATACTGT
AGCGGTCTGTTCCGCTCCCAGAAGTCTCCCCGCTGATCTAGAGTACATGC
TCCGACAATCTATCCTGCCGTTAGATGACCGAAGATCTATGTCCAGCACC
GAGCCTTTCATGATAAAATCTAAAGTGAATGAAGCGTCGGCTCCCAGGTT
TGGTCCACGGGTCTGGCACCGACAGAGCTCGTCTCTTCGATGGATGGGCT
CGAGAAGGAGAGGGGCAGGATTAAAGTCGACGGGCGTTTGAGGGTCCCCG
GGCGTGGAAGGCGTGTTCGCTATGGGCGATGCCGCGGTCAACCCGGCAAA
TCCATTGGGGCCTCTCGCTCAAGTCGCTGACCAGCAAGGAAAGGTAAGAA
ACAATCCTTAGCCTGCGGGACGGGCTCACCGAAACTCCCCCTTAAGGGCA
CAAGCCAAACGCGATATGTTCGCGTTAACTCGTTGGCGACGACTTCGCTC
TGAAATCTCCGCCCTCCTCCTTCTACCCCTCGCGCGTTTCCCCTCCCGCC
CCCCCCCTCCCGTTTTATCAATGGCAACACCCGACAACGACAGTATTTGG
CCAAATGGCTCTCCAAGACCAACCCCGTCGACCCAGGCATCCCTCCTTTC
ACCTACCGCCACTTGGGATCGATGGCTCAAGTGGGGGACTGGAAGGCGAT
CGCCGACTTAAAGGGCGTCGGCGGTGCCAAGTCCGGCGGCCCAACCTTAG
ATGGCTTCTTGGCGTTCGCGACGTGGCGGTCCGCGTATTGGACAAAGACC
GTCAGCGTCGCAAACAAGGTTTTGATTCCCATGCACTGGTTCAAAGCTTG
GGCTTTCGGACGAGACATCAGTCGCTTTTGAAAAGGGGAAGAGTAATTAA
AAATTAAAAATGGTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7811:813..6228+

>mRNA_L-elsbetiae_contig7811.16763.1 ID=mRNA_L-elsbetiae_contig7811.16763.1|Name=mRNA_L-elsbetiae_contig7811.16763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=666bp|location=Sequence derived from alignment at L-elsbetiae_contig7811:813..6228+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCAGTTTCGACGACAAGCTCATCAGCTACACAACGCGTCTCTTGGA
AAACCGCAAGATGGGCAGTTTCGACGACAAGCTCATCAGCTACACAACGC
GTCTCTTGGAAAACCGCAAGGTGGAAGTTCTGCTGAACACCTCTGTGAAG
TCGGTCGGGCCGACGGATTGCACGCTTGGCGACGGCCGCAAGTTACCCTT
CGGATTAATGGTGGAAGTTCTGCTGAACACCTCTGTGAAGTCGGTCGGGC
CGACGGATTGCACGCTTGGCGACGGCCGCAAGTTACCCTTCGGATTAATG
GTTTGGTCCACGGGTCTGGCACCGACAGAGCTCGTCTCTTCGATGGATGG
GCTCGAGAAGGAGAGGGGCAGGATTAAAGTCGACGGGCGTTTGAGGGTCC
CCGGGCGTGGAAGGCGTGTTCGCTATGGGCGATGCCGCGGTCAACCCGGC
AAATCCATTGGGGCCTCTCGCTCAAGTCGCTGAGTTTGGTCCACGGGTCT
GGCACCGACAGAGCTCGTCTCTTCGATGGATGGGCTCGAGAAGGAGAGGG
GCAGGATTAAAGTCGACGGGCGTTTGAGGGTCCCCGGGCGTGGAAGGCGT
GTTCGCTATGGGCGATGCCGCGGTCAACCCGGCAAATCCATTGGGGCCTC
TCGCTCAAGTCGCTGA
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