mRNA_L-elsbetiae_contig7786.16733.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 159 bits (403), Expect = 1.900e-40 Identity = 127/382 (33.25%), Postives = 168/382 (43.98%), Query Frame = 2 Query: 2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEK---GLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARAAMKRAVKFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDEGEKDEAKVAAFCRMLERGPAFRARSYCWPVQTSTALVSISSGGVAKRN---APLDLRIFRPSNHAFFTTRFVRYTRK 1129 PL AA +DI+ LL++ GA+L+ T A+ L F GT LH A L LR LL +GA PN DG GC PLM C A +T ALH AA + A D + +L++ APST+ + D G++AVGG A A++R++ +IL+ LL +EGE+ R WA +G P L AA L A S+LL AGADE AS +GA L +K+ AA CR+LERGPAFRARS+ W ++S A +SG V A LD+RIFRP+ + FF+ RF RY +K Sbjct: 42 PLFLAANRGRIDILKLLIDNGADLD-GTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAWAAESSEA--PAASGTVCSMKGGRATLDVRIFRPTGNQFFSARFSRYCKK 420
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.430e-29 Identity = 109/338 (32.25%), Postives = 153/338 (45.27%), Query Frame = 2 Query: 2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAA---YAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAP-STLKYA-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARA-AMKRAVKFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDEGEKDEAKVAAFCRMLERGPAFRARSYCWPV 997 P++ AA ++ L+++GA++ +T R FP G+RA+H A YAG L LR L+++GA N ++ GC PLM AC + E V L LL+AG +L D +GR ALH AA+ G + I+ L++ STL A + G++AVGG A ++ A + + +IL LL EG+E + WA G P++ AA LA VLLAAGADE + +G A VIG L G D + AA R L+RGPA+RARS+ WPV Sbjct: 43 PVVFAAAVGSASMIKFLVDKGADINSSTWRPGA-------FPSGSRAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRVDKEGAER-VELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAWPV 372
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 128 bits (322), Expect = 3.070e-29 Identity = 117/380 (30.79%), Postives = 165/380 (43.42%), Query Frame = 2 Query: 2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARAAMKRAVKFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVL-DEGEKDEAKVAAFCRMLERGPAFRARSYCWPVQ---TSTALVSISSGGVAKRNAPLDLRIFRPSNHAFFTTRFVRYTRK 1129 P++ AA ++ LL+ +GA+LE FP G+RA+HAA + L LL++GA N++DG G PLM + L L + GA P + + +G A+H AA G + + V++ PS L D + G+ VGG+ A ++ AV+ + KILE L+ EGEE R WA +G P+ LA AA + A VLL+AGA E + G LAS +G L + K AA RML+RGPA+RARSY WP T+ V++SS + ++IFRP+ FF TRF RY K Sbjct: 43 PIMGAARNGNAAMLKLLISKGADLETEAR-----------FPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTA-----LADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAILWACDGGHPRMVRMML--EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLA-AAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSSRTRGANS--FGVQIFRPTGTRFFATRFARYANK 401
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 124 bits (310), Expect = 2.900e-27 Identity = 111/368 (30.16%), Postives = 159/368 (43.21%), Query Frame = 2 Query: 38 IVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARAAMKRAVKFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDE-GEKDEAKVAAFCRMLERGPAFRARSYCWPVQ---TSTALVSISSGGVAKRNAPLDLRIFRPSNHAFFTTRFVRYTRK 1129 ++ LL+ +GANLE FP G+RA+HAA + L LL++GA N++DG G PLM + L L + GA P + + +G A+H AA G + + V++ PS L D + G+ VGG+ A ++ AV+ + KILE L+ EGE+ R WA +G P+ LA AA + VLL+AGA E + G LA +G L + K AA RML+RGPA+RARSY WP T+ V++SS ++ ++I+RP+ FF TRF RY K Sbjct: 110 MLKLLISKGANLETEAR-----------FPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTA-----LADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMML--EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLA-AAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRTRGAKS--FGVQIYRPTGTRFFATRFARYANK 456
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.880e-21 Identity = 115/371 (31.00%), Postives = 163/371 (43.94%), Query Frame = 2 Query: 2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAAC-NGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYA----DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARA---AMKRAVKFNRTKILEKLLGI-EGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDEGEKD---EAKVAAFCRMLERGPAFRARSYCWPVQTSTALVSISSGGVAKRNAPLDLRIFR 1078 PL+ A+ +++VN LL+ GA +E T + F G RA H A +G+L L LL++GA +A + G LM AC P T CV + + LL+AGA P + D EG+VALH AA G + I++L+ A S+L + GLE+VGG AAR ++ A K RT++L+ LL + G+ +WAN G P+L A + VLLAAGADE V ++ A +IG +L G K + AA R L RGPA+RARS+ WP + A +++ PL + IFR Sbjct: 42 PLMVASGSGSVEVVNFLLQNGAEMEHQT-----WGDDDHRF-LGMRATHWAVTSGKLDTLLVLLKAGAVYDAVNAQGETCLMNACMTDASPPT--CVAMAKALLDAGADPLIEDREGQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSALESNQVQAVAHLLSLGARATVDREGRGNLLRRAVVKNSEPIVRVLFEAGLESVGG--AARVMPDSLASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYVWGG-PLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDLLASGSKSASFRSDKAAIRRTLLRGPAYRARSWTWPPLAAGADDAVAFPSGHPEKVPLGVHIFR 401
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 1.200e-18 Identity = 98/357 (27.45%), Postives = 142/357 (39.78%), Query Frame = 2 Query: 2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGL-IFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPAT-ENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DTGLEAVGGVEAARAAMKRAV--KFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDEGEKDEAKVAAFCRMLERGPAFRARSYCWPVQTSTALVSISSGGVAKRNAP 1057 P++ AA + + LL++ A++++ + N L GL + +G RALH A + V R LL++GA P++ +G G PLM C A E + + AL AA + I++L+ AP+TL A D G++A+GG + A+ A + R I+ LL EG E WA E PVL + + ++AT VLLAAGADE +G A V+G ++D AK A RMLERGPA+RARS+ WP + A AP Sbjct: 146 PIIAAAASCKVGMAELLIKRKADVDLGS-LNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKED-PVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWPATARAYTAGHTCAAAATTAAP 500
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D8LME7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME7_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 5.560e-12 Identity = 62/210 (29.52%), Postives = 84/210 (40.00%), Query Frame = 2 Query: 125 PRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARAAMKRAVKFNRTKILEKLLGIEGEEMRAWWANS 754 P+G + AA + L+ +L++GA PN DG GC L AC C+ V LL+ GA P+L ALHTAA G + L+AAAP+TL + GLEAVGG+++ AM AV +RT+ L LL +EGEE R +WA + Sbjct: 14 PKGLGLVSAAVIVRRIPALQCVLRAGADPNTPDGVGCNALQVACFDGDDERRLCI--VRELLKWGANPNLRGGPYGSALHTAAKEGHTNLFTTLLAAAPATLNLVNEQGLTPLGTATSFGRHKAVTCLLSLGASDRQVFQETRSGSLQEAVVAGHDTLLSLLLGKGLEAVGGLDSIPDAMGCAVTKSRTRTLNLLLSVEGEERRTFWART 221
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: UPI000F6860E2 (transient receptor potential channel pyrexia-like isoform X2 n=2 Tax=Penaeus TaxID=133894 RepID=UPI000F6860E2) HSP 1 Score: 65.9 bits (159), Expect = 1.010e-7 Identity = 51/150 (34.00%), Postives = 73/150 (48.67%), Query Frame = 2 Query: 2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPAT--ENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAA-APSTLKYAD 442 PL+ A + + + V L+ GAN+ +A G LH A+ G +S LR L+ GA P+ D + PL A P N V++VE+LL AGAL D +GR+ALH AA G+ I++LV ST+ + D Sbjct: 69 PLIYAVKHDFTEAVLELVAAGANVNLADAA-------------GITPLHMASGGGHISTLRILIARGAPPDPLDNHARTPLHYAARAANPGPGGSNFVSVVEMLLSAGALLGRRDADGRLALHNAATAGSSKLIKILVRGRGSSTINFKD 205
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: A0A3R7LSC8_PENVA (Ion_trans domain-containing protein n=4 Tax=Penaeus TaxID=133894 RepID=A0A3R7LSC8_PENVA) HSP 1 Score: 65.9 bits (159), Expect = 1.120e-7 Identity = 51/150 (34.00%), Postives = 73/150 (48.67%), Query Frame = 2 Query: 2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPAT--ENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAA-APSTLKYAD 442 PL+ A + + + V L+ GAN+ +A G LH A+ G +S LR L+ GA P+ D + PL A P N V++VE+LL AGAL D +GR+ALH AA G+ I++LV ST+ + D Sbjct: 69 PLIYAVKHDFTEAVLELVAAGANVNLADAA-------------GITPLHMASGGGHISTLRILIARGAPPDPLDNHARTPLHYAARAANPGPGGSNFVSVVEMLLSAGALLGRRDADGRLALHNAATAGSSKLIKILVRGRGSSTINFKD 205 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7786.16733.1 >prot_L-elsbetiae_contig7786.16733.1 ID=prot_L-elsbetiae_contig7786.16733.1|Name=mRNA_L-elsbetiae_contig7786.16733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=301bp MAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAback to top mRNA from alignment at L-elsbetiae_contig7786:2867..4840- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7786.16733.1 ID=mRNA_L-elsbetiae_contig7786.16733.1|Name=mRNA_L-elsbetiae_contig7786.16733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig7786:2867..4840- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7786:2867..4840- >mRNA_L-elsbetiae_contig7786.16733.1 ID=mRNA_L-elsbetiae_contig7786.16733.1|Name=mRNA_L-elsbetiae_contig7786.16733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1806bp|location=Sequence derived from alignment at L-elsbetiae_contig7786:2867..4840- (Laminarionema elsbetiae ELsaHSoW15)back to top |