prot_L-elsbetiae_contig7780.16730.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7780.16730.1
Unique Nameprot_L-elsbetiae_contig7780.16730.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length241
Homology
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BLAST of mRNA_L-elsbetiae_contig7780.16730.1 vs. uniprot
Match: D8LD96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD96_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 4.980e-46
Identity = 84/115 (73.04%), Postives = 98/115 (85.22%), Query Frame = 0 
Query:   22 SNFPPGLLNPG---PLTTASPSFCARFLRVECTSGREFVFNLFFSSYGVWLLLPLSMLLLLVYRLVGPPEVDEREEELRQQWDDHRQRFKSGAKRSSLRGVIKSSYLTELSENGG 133
            +NFPPGLLNPG   P + A+  +C R L VEC +GR  +FN+FF+ YGVW+LLPLS++LLLVYRLVGPPEVDEREE LRQQW +HRQRFKSGAKRS+LRGVIKSSYLTELS+ GG
Sbjct:    2 NNFPPGLLNPGVSTPASVAAAGWCVRVLGVECPTGRVLIFNVFFTGYGVWMLLPLSIILLLVYRLVGPPEVDEREELLRQQWVEHRQRFKSGAKRSTLRGVIKSSYLTELSDRGG 116
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BLAST of mRNA_L-elsbetiae_contig7780.16730.1 vs. uniprot
Match: A0A6H5JP60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP60_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 3.490e-22
Identity = 46/71 (64.79%), Postives = 58/71 (81.69%), Query Frame = 0 
Query:   22 SNFPPGLLNPGPLTTASPS---FCARFLRVECTSGREFVFNLFFSSYGVWLLLPLSMLLLLVYRLVGPPEV 89
            ++FPPGLLNPG  T+AS +   +C R L VEC +GRE +FN+FF+ YGVW+L PLS++LLLVYRLVGPPEV
Sbjct:    2 NSFPPGLLNPGVSTSASVATAGWCVRLLGVECPTGRELIFNVFFTGYGVWMLFPLSIILLLVYRLVGPPEV 72
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BLAST of mRNA_L-elsbetiae_contig7780.16730.1 vs. uniprot
Match: A0A6H5JJV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 4.200e-16
Identity = 73/153 (47.71%), Postives = 76/153 (49.67%), Query Frame = 0 
Query:   90 DEREEELRQQWDDHRQRFKSGAKRSSLRGVIKSSYLTELSENGGRRPRGRGGSGVXXXXXXXXXXXXXXXXXXXXXXXXXAGSSRSSAPHARRVSRHGEAGDTYD-DDDDSWEDVRVSPKDIPAAAAVAAAPRLPPPRETVHVLTTPGPTRVT 241
            DEREE LRQQW +HRQRFKSGAKRS+LRGVIKSSYLTELS+ GG       G  V                           SS S   H           D  D DDD SWEDVRV      AA            RETV VLTTPGPTRVT
Sbjct:   13 DEREELLRQQWVEHRQRFKSGAKRSTLRGVIKSSYLTELSDRGGGXXXX--GDAVSAPGLRE--------------------SSSSLVSHV--------IPDVDDIDDDSSWEDVRV------AATXXXXXXXXXXXRETVCVLTTPGPTRVT 129
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7780.16730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LD96_ECTSI4.980e-4673.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP60_9PHAE3.490e-2264.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV4_9PHAE4.200e-1647.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..64
NoneNo IPR availableTMHMMTMhelixcoord: 56..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7780contigL-elsbetiae_contig7780:920..2549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7780.16730.1mRNA_L-elsbetiae_contig7780.16730.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7780 920..2550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7780.16730.1 ID=prot_L-elsbetiae_contig7780.16730.1|Name=mRNA_L-elsbetiae_contig7780.16730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
WCGLVGFIDEKGWAARALPMSSNFPPGLLNPGPLTTASPSFCARFLRVEC
TSGREFVFNLFFSSYGVWLLLPLSMLLLLVYRLVGPPEVDEREEELRQQW
DDHRQRFKSGAKRSSLRGVIKSSYLTELSENGGRRPRGRGGSGVVVAAAV
AAASSSSSDGGAGGEGGQRAGSSRSSAPHARRVSRHGEAGDTYDDDDDSW
EDVRVSPKDIPAAAAVAAAPRLPPPRETVHVLTTPGPTRVT
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