prot_L-elsbetiae_contig7763.16706.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7763.16706.1
Unique Nameprot_L-elsbetiae_contig7763.16706.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length45
Homology
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BLAST of mRNA_L-elsbetiae_contig7763.16706.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 4.780e-15
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 0 
Query:    1 VNEIYERYVPSSWAKPTPDADQHLREQWIMAKYKHR 36
            VNEIYERYVPSSW KPTPDADQ  REQW++AKYKHR
Sbjct:   71 VNEIYERYVPSSWTKPTPDADQQQREQWVLAKYKHR 106
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7763.16706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU92_ECTSI4.780e-1586.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 1..38
e-value: 5.3E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7763contigL-elsbetiae_contig7763:1388..1522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7763.16706.1mRNA_L-elsbetiae_contig7763.16706.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7763 1388..1522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7763.16706.1 ID=prot_L-elsbetiae_contig7763.16706.1|Name=mRNA_L-elsbetiae_contig7763.16706.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=45bp
VNEIYERYVPSSWAKPTPDADQHLREQWIMAKYKHRCGGGVVQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038508ArfGAP_dom_sf