prot_L-elsbetiae_contig776.16702.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig776.16702.1
Unique Name	prot_L-elsbetiae_contig776.16702.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	170

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig776.16702.1 vs. uniprot
Match: D8LMN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN2_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 3.830e-42
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 0

Query:    4 QVVTVGKSVPPTSREEALTKFAHAVFDRLFEMARGKEGNPAAVTLLRVEVYATVLELCLCTIKMSRTAGRNKKDLSTQWYTRLPLQVIVGPGSRMLHLGALNYLVQ 109
            ++VTVGKSVP ++RE+ALTKFA AVF+RLFEMARGKE NPAAV LLRVEVYA VLELCL T++ S  +GRNK+DL TQWYT LP Q I+GPGSR LHL AL YLVQ
Sbjct:  626 EIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQ 731

[Close]

BLAST of mRNA_L-elsbetiae_contig776.16702.1 vs. uniprot
Match: A0A6H5JXN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 4.010e-42
Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 0

Query:    4 QVVTVGKSVPPTSREEALTKFAHAVFDRLFEMARGKEGNPAAVTLLRVEVYATVLELCLCTIKMSRTAGRNKKDLSTQWYTRLPLQVIVGPGSRMLHLGALNYLVQ 109
            ++VTVGKSVP ++RE+ALTKFA AVF+RLFEMARGKE NPAAV LLRVEVYA VLELCL T++ S  +GRNK+DL TQWYT LP Q I+GPGSR LHL AL YLVQ
Sbjct: 2061 EIVTVGKSVPLSAREDALTKFARAVFNRLFEMARGKEDNPAAVPLLRVEVYAAVLELCLRTVRTSLVSGRNKEDLLTQWYTGLPPQAIIGPGSRKLHLAALKYLVQ 2166

[Close]

BLAST of mRNA_L-elsbetiae_contig776.16702.1 vs. uniprot
Match: A0A835ZHM2_9STRA (CCR4-Not complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.360e-8
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 0

Query:    4 QVVTVGKSVPPTSREEALTKFAHAVFDRLFEMARGKEGNPAAVTLLRVE 52
            +VV VG+ VP   REEALT FA  VF RLF+MARGKE + A V LLRVE
Sbjct: 1788 EVVVVGQRVPAERREEALTLFAQGVFQRLFDMARGKEDSAADVPLLRVE 1836

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig776.16702.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig776.16702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LMN2_ECTSI	3.830e-42	74.53	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JXN6_9PHAE	4.010e-42	74.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835ZHM2_9STRA	6.360e-8	65.31	CCR4-Not complex component, Not1-domain-containing...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 136..161
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..135
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 162..169
None	No IPR available	TMHMM	TMhelix		coord: 138..160

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig776	contig	L-elsbetiae_contig776:490..2240 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig776.16702.1	mRNA_L-elsbetiae_contig776.16702.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig776 165..2876 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig776.16702.1 ID=prot_L-elsbetiae_contig776.16702.1|Name=mRNA_L-elsbetiae_contig776.16702.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp
MALQVVTVGKSVPPTSREEALTKFAHAVFDRLFEMARGKEGNPAAVTLLR
VEVYATVLELCLCTIKMSRTAGRNKKDLSTQWYTRLPLQVIVGPGSRMLH
LGALNYLVQAHAPETRFPTENSLATPPPPTPPPYRVFMAVALSVCCLWVW
RVVGVVVTFFCQGSMRQRD*