prot_L-elsbetiae_contig7753.16696.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7753.16696.1
Unique Nameprot_L-elsbetiae_contig7753.16696.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length269
Homology
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BLAST of mRNA_L-elsbetiae_contig7753.16696.1 vs. uniprot
Match: D7FT38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT38_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 2.630e-39
Identity = 128/271 (47.23%), Postives = 144/271 (53.14%), Query Frame = 0 
Query:    1 MPINENELLELNADLMVLIREKQEQGALADAVSLQIVLHKNLMRLRHYMAAPDMPIPDMPKDWMPPRPRPDTPPAEESDSDPDS-GDEQSSQGRRAARKGKGKQRXXXXXXXXRREGSAPPPTGAVAAPGT-------------LPGFT----------GSANSGNGGERGGVAPGGHGKQPSGEXXXXXXXXXXXXXXXAPSXARRKYKPRRKKSQVGGASASGG-----------------GLGDLLYAGMLTREQTAPHIPSSIPFMP 230
            M I ENELLE+NADLMVLIREKQEQGALADA SLQIVLHKNLMRLR +MAAPD PIP+ PKDWMPP P PDTPPA ESDS+ DS GDEQ  QG RA RKGK    XXXXX   R EG A P   +  A G+             LPGF+          G A +G  G  G     G  +   G                  S + R    R++KS                           GLG LLYAGM + E+ +PHIPSS  F+P
Sbjct:    1 MTITENELLEINADLMVLIREKQEQGALADATSLQIVLHKNLMRLRQFMAAPDEPIPNAPKDWMPPMPTPDTPPAGESDSESDSTGDEQGVQGERATRKGKXX--XXXXXRQPRAEGCAAPGVTSARASGSXXXXXXXXGAVRLLPGFSATETQFVGEHGGAGAGAAGACGAAITDGQQQVRGGVGRSPCAGLPSGTTASLSSPSTR----RKRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGTLLYAGMRSHEKVSPHIPSSSAFVP 265
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7753.16696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT38_ECTSI2.630e-3947.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007726SS18 familyPFAMPF05030SSXTcoord: 7..45
e-value: 6.1E-6
score: 25.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7753contigL-elsbetiae_contig7753:1740..3395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7753.16696.1mRNA_L-elsbetiae_contig7753.16696.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7753 1716..3395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7753.16696.1 ID=prot_L-elsbetiae_contig7753.16696.1|Name=mRNA_L-elsbetiae_contig7753.16696.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
MPINENELLELNADLMVLIREKQEQGALADAVSLQIVLHKNLMRLRHYMA
APDMPIPDMPKDWMPPRPRPDTPPAEESDSDPDSGDEQSSQGRRAARKGK
GKQRQQRPQQPQRREGSAPPPTGAVAAPGTLPGFTGSANSGNGGERGGVA
PGGHGKQPSGEGEGAGAGGEAGPWPSAPSPARRKYKPRRKKSQVGGASAS
GGGLGDLLYAGMLTREQTAPHIPSSIPFMPMPMTQRATSDYSSAAAARPP
PIPPAPTPPSSFPAHQSPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007726SS18_fam