mRNA_L-elsbetiae_contig775.16693.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A835ZCK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCK8_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.040e-64 Identity = 119/180 (66.11%), Postives = 141/180 (78.33%), Query Frame = 2 Query: 29 KTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELATTQEG 568 K+RF+A DVRAMVRDLR+S LGLRV NVY L D KT L+KLA+PG+EKA+LL+ESG RFHTT+F+H+KSDMPS FSMKLRKHI+ +RLED+RQ+ DRVVDFKFGSG A+ H+ILELYASGNIILTD KYE+L LLRTH+Y +D VAVRQIYP+ AT Q+G Sbjct: 2 KSRFSATDVRAMVRDLRASSLGLRVINVYDL-DSKTFLIKLANPGREKAVLLLESGTRFHTTRFSHDKSDMPSAFSMKLRKHIKAKRLEDIRQLAFDRVVDFKFGSGDAACHIILELYASGNIILTDSKYEVLQLLRTHSY-----------------GADALVAVRQIYPVAHATAQDG 163
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: D8LHP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP2_ECTSI) HSP 1 Score: 214 bits (546), Expect = 6.070e-61 Identity = 112/133 (84.21%), Postives = 114/133 (85.71%), Query Frame = 2 Query: 176 MLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELATTQEGTT 574 MLL+ESGVRFHTTKFTH KSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTD KYEILDLLRTH YEGQ +VRVAVRQIYPMELATTQEGTT Sbjct: 1 MLLLESGVRFHTTKFTHTKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDSKYEILDLLRTHIYEGQGGGAAGGSGATGGAGDNVRVAVRQIYPMELATTQEGTT 133
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A6U1AHC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1AHC6_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.470e-53 Identity = 101/179 (56.42%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 23 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELATT 559 M K+RF+AADVRA VRDLR VLG+R NVY + D KT L KLA+PG EK +LL+ESGVRFH+T + +K+DMPSGFSMKLRKHIR +RLE++ Q+G+DRVVDF+FGSG +H+ILE+YA+GNIILTD Y IL +LR+H ++ AV Q+YP+ ATT Sbjct: 1 MVKSRFSAADVRATVRDLRGRVLGMRCVNVYDI-DSKTYLFKLANPGTEKVVLLLESGVRFHSTSYARDKADMPSGFSMKLRKHIRAKRLENIAQLGIDRVVDFRFGSGTECHHIILEMYAAGNIILTDHSYSILAVLRSHKFD-----------------ETASTAVNQLYPIAHATT 161
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A7S1UGR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGR3_9STRA) HSP 1 Score: 176 bits (445), Expect = 5.630e-53 Identity = 90/145 (62.07%), Postives = 117/145 (80.69%), Query Frame = 2 Query: 23 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEG 457 M + RF A+DVRAMVRDLRS +LG+RV+N+Y + + KT LLKLA PG+++ +LL+ESG RFH+T+F +KS MPSGF+MKLRKH+RT+RLED+RQ+G DRVV F FG G+++N +ILELYA GNI+LT + IL LLR H Y G Sbjct: 1 MVRQRFDASDVRAMVRDLRSRLLGMRVSNIYDV-NAKTYLLKLAEPGRDREVLLLESGSRFHSTRFELDKSAMPSGFAMKLRKHLRTKRLEDLRQLGTDRVVVFTFGIGESTNCLILELYAQGNIVLTAPDFTILALLRVHDYAG 144
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: W7T3P9_9STRA (Fibronectin-binding A protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3P9_9STRA) HSP 1 Score: 172 bits (436), Expect = 2.680e-51 Identity = 89/147 (60.54%), Postives = 113/147 (76.87%), Query Frame = 2 Query: 23 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKS---DMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYE 454 M KT+FT DVRAMVRDLR+ VLGL+V N+Y + D +T KLA PG EK LL+ESG RFHTT + E+S ++P+ F+MKLRK++R + LEDVRQ+GMDRVV F+FG G+ + H+ILELYASGN++LTD Y IL LLRTH Y+ Sbjct: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDI-DNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYD 146
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: K8Z908_NANGC (Zinc knuckle (Cchc-type) family protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z908_NANGC) HSP 1 Score: 172 bits (436), Expect = 8.460e-49 Identity = 89/147 (60.54%), Postives = 113/147 (76.87%), Query Frame = 2 Query: 23 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKS---DMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYE 454 M KT+FT DVRAMVRDLR+ VLGL+V N+Y + D +T KLA PG EK LL+ESG RFHTT + E+S ++P+ F+MKLRK++R + LEDVRQ+GMDRVV F+FG G+ + H+ILELYASGN++LTD Y IL LLRTH Y+ Sbjct: 1 MVKTKFTTPDVRAMVRDLRTKVLGLKVVNIYDI-DNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPNVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYD 146
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: C3Z3R8_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z3R8_BRAFL) HSP 1 Score: 163 bits (412), Expect = 6.810e-48 Identity = 91/175 (52.00%), Postives = 121/175 (69.14%), Query Frame = 2 Query: 29 KTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELA 553 K RF+ D+RA++ +++ SVLG+RVANVY + D KT L+KL EK MLL+ESG R + T F K+ MPSGFSMKLRKH+RT+RL ++Q+G DR+VD +FG +A+ H+I+ELY GN+ILTD++Y IL+LLRT T EG DVR AVR+ YP+ELA Sbjct: 2 KGRFSTVDLRAILTEIKDSVLGMRVANVYDI-DNKTYLIKLVKT-DEKKMLLLESGTRLYATSFDWPKNMMPSGFSMKLRKHLRTRRLISIQQLGSDRIVDMQFGENEAAYHLIVELYDRGNLILTDYEYTILNLLRTRT-EGD----------------DVRFAVREKYPLELA 157
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A7S3J190_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3J190_9SPIT) HSP 1 Score: 164 bits (414), Expect = 5.030e-47 Identity = 86/171 (50.29%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 29 KTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYP 541 K R TA D+RA+V L+ ++ LRVAN+Y + K L KLA+ G K LLIE+G+R HTT F K+ +PSGFSMKLRKH+RT+R+ED+RQVG+DRVVD G G+A+ H+++E YASGN+ILTD Y I+ LLRTH Y+ D R AV ++YP Sbjct: 6 KQRLTAIDIRALVMTLKRKIMSLRVANIYDI-SNKLYLFKLAAKGN-KEFLLIEAGIRMHTTGFVKNKNGIPSGFSMKLRKHLRTKRVEDIRQVGIDRVVDITLGQGEAAYHILIEFYASGNLILTDANYTIISLLRTHRYD-----------------EDTRCAVGEVYP 157
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A8D0G7Y4_SPHPU (Nuclear export mediator factor n=2 Tax=Sauria TaxID=32561 RepID=A0A8D0G7Y4_SPHPU) HSP 1 Score: 161 bits (407), Expect = 8.620e-47 Identity = 86/175 (49.14%), Postives = 125/175 (71.43%), Query Frame = 2 Query: 29 KTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKSDMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYEGQXXXXXXXXXXXXXXXSDVRVAVRQIYPMELA 553 K+RF+ D+RA++ +LRSS+LG+RV NVY + D KT L++L P KA LL+ESG+R HTT+F K+ MPSGF+MK RKH++++RL +V+Q+G+DR+VDF+FGS +A+ H+I+ELY GNI+LTD++Y IL++LR T E DV+ AVR+ YP++ A Sbjct: 2 KSRFSTVDIRAVIAELRSSLLGMRVNNVYDV-DNKTYLIRLQKPDC-KATLLLESGIRIHTTEFEWPKNMMPSGFAMKCRKHLKSRRLVNVKQLGIDRIVDFQFGSDEAAYHLIIELYDRGNIVLTDYEYLILNILRFRTDEAD----------------DVKFAVRERYPVDNA 158
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Match: A0A4D9CTN6_9STRA (NFACT-R_1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTN6_9STRA) HSP 1 Score: 174 bits (440), Expect = 9.580e-47 Identity = 91/147 (61.90%), Postives = 113/147 (76.87%), Query Frame = 2 Query: 23 MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKAMLLIESGVRFHTTKFTHEKS---DMPSGFSMKLRKHIRTQRLEDVRQVGMDRVVDFKFGSGKASNHVILELYASGNIILTDFKYEILDLLRTHTYE 454 M KT+FT DVRAMVRDLR+ VLGL+V N+Y + D +T KLA PG EK LL+ESG RFHTT + E+S ++PS F+MKLRK++R + LEDVRQ+GMDRVV F+FG G+ + H+ILELYASGN++LTD Y IL LLRTH YE Sbjct: 1 MVKTKFTTPDVRAMVRDLRTRVLGLKVINIYDI-DNRTYTFKLAVPGGEKVTLLLESGARFHTTAYARERSVPGELPSVFAMKLRKYLRGKGLEDVRQLGMDRVVVFRFGQGEGALHLILELYASGNLVLTDANYLILALLRTHQYE 146 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig775.16693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig775.16693.1 >prot_L-elsbetiae_contig775.16693.1 ID=prot_L-elsbetiae_contig775.16693.1|Name=mRNA_L-elsbetiae_contig775.16693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=189bp MTKTRFTAADVRAMVRDLRSSVLGLRVANVYSLLDQKTVLLKLASPGQEKback to top mRNA from alignment at L-elsbetiae_contig775:21917..24627+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig775.16693.1 ID=mRNA_L-elsbetiae_contig775.16693.1|Name=mRNA_L-elsbetiae_contig775.16693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2711bp|location=Sequence derived from alignment at L-elsbetiae_contig775:21917..24627+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig775:21917..24627+ >mRNA_L-elsbetiae_contig775.16693.1 ID=mRNA_L-elsbetiae_contig775.16693.1|Name=mRNA_L-elsbetiae_contig775.16693.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1134bp|location=Sequence derived from alignment at L-elsbetiae_contig775:21917..24627+ (Laminarionema elsbetiae ELsaHSoW15)back to top |