mRNA_L-elsbetiae_contig775.16692.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig775.16692.1
Unique Name	mRNA_L-elsbetiae_contig775.16692.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: A0A6H5JQP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP8_9PHAE)

HSP 1 Score: 447 bits (1151), Expect = 1.680e-149
Identity = 297/513 (57.89%), Postives = 334/513 (65.11%), Query Frame = 3

Query:   81 PEFKACFSVPSTATG-------AVSSVSTRPKMRWGFWSSHDKSWMQLVQQNYEKHHRTPRPPEKFTGEYVDSSGQPLIPFTIHHIWLGSPLPEALARLRESWLSRHRHTGSRRTGPDQES-GEDWCGEGAGEWELRLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTRYEFYTGLSNTGTFELNNGLVGCRPGHPIMRDIVNRIRDTCG--PPCRPPVXXXXXXXXXXXXXXXVEAAARGGEIDCDCGSRGNGGSVVVGDPLSALMGALGGXXXXXXXXXXXXXXXGLLAGLLGGEDRARLEQAVTAVEPGSATETIVKTGPGVFTRAVMAWMVASAAGES--------GFGANGEAEECVLGRSGATSAVHREIPASGSGCSDGNGGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSLVMMVLPPSYLYPVPNNAVAATEGSLVGDGSESGVRERAGDFFSAESLAAHLWGRSWQ 1565
            P F  CFS   T+         A S +S R K+RWG WS +D  WMQLVQ NY KHHR   P        +   G+PLIP  IHHIWLGSPLP A ARL ESWL+RH       +GP  +  G +     +  WE+RLWTDADI+AFGLEN  AY+AA NFGQKSDILRYEILLRHGGLYVDVDFLCL+SF++LH RYEFY G+SNTGTFELNNGL+GCRPGHPIMRDIVNRI+ +C   P   PP                +      G +  D G  G      VGDPLSALMGALG                GLLAGLLGG+DRARL QAV  VE  SATETIVKTGPGVFTRAVMAWMV+SA GE         G G +  AEE +   +G  +   R+  A G           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AA +   M+LPPSYLYP+PNNA AA  G L+GDG+ESGVRERAG + S+ESLAAHLWGRSWQ
Sbjct:   24 PVFSDCFSPSPTSXXXXXXXXXAASILSARAKIRWGLWSPNDAEWMQLVQDNYNKHHRLAGP--------IREDGEPLIPLKIHHIWLGSPLPAAFARLCESWLARH-------SGPSSQGLGHEMSKSSSTPWEVRLWTDADINAFGLENRGAYDAAQNFGQKSDILRYEILLRHGGLYVDVDFLCLSSFDDLHRRYEFYAGVSNTGTFELNNGLIGCRPGHPIMRDIVNRIKSSCCSLPSSTPPSHPGKPSSSSVAAGVLLSGVGVAGSVT-DAGGDGXXXGTTVGDPLSALMGALG----------EEGGAGGLLAGLLGGDDRARLRQAVE-VEADSATETIVKTGPGVFTRAVMAWMVSSATGEDRAAPATADGSGTSSAAEEDIFHSTGTAA---RDADAFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAA-TRPAMILPPSYLYPIPNNAAAAKAGLLIGDGTESGVRERAGGYLSSESLAAHLWGRSWQ 505

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: D7FIJ5_ECTSI (Surface protein Sur1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ5_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.600e-78
Identity = 124/185 (67.03%), Postives = 139/185 (75.14%), Query Frame = 3

Query:  156 MRWGFWSSHDKSWMQLVQQNYEKHHRTPRPPEKFTGEYVDSSGQPLIPFTIHHIWLGSPLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWELRLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTRYEFYTGLSNTGTFELNNGLVG 710
            MRWG WS  D  WMQLVQ NY KHHR   P        V   G+ LIP  IHHIWLGSPLPEA ARLRESWL+RH    S+  GP++ +G      G+  WE+RLWTDAD+DAFGLEN  AY+AA NFGQKSDILRYE+LLRHGGLYVDVDFLCL SF++LH RYEFY G+SNTGTFELNNGL+G
Sbjct:    1 MRWGLWSPIDAEWMQLVQDNYNKHHRLAGP--------VREDGEALIPLKIHHIWLGSPLPEAFARLRESWLARHSGLSSQGRGPERSNG------GSTPWEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRYEFYAGVSNTGTFELNNGLIG 171

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: A0A836C8H1_9STRA (Surface protein Sur1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H1_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.060e-42
Identity = 82/191 (42.93%), Postives = 111/191 (58.12%), Query Frame = 3

Query:  141 STRPKMRWGFWSSHDKSWMQLVQQNYEKHHRTPRPPEKFTGEYVDSSGQ-PLIPFTIHHIWLGSPLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWELRLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTRYEFYTGLSNTGTFELNNGLVG 710
            S RP ++W  WS+ D+ W+ L   +YE   R     ++ +G+   + GQ P IP T+H +WLG  +P     LRESW   H                    +G   WELRLW   D++ FGLEN  A++AA N+G+KSDI RYEIL RHGG+YVDVDFLCL S + +    +F+ GL+N G  E+NNGL+G
Sbjct:   16 SDRP-LKWALWSTEDRRWLHLASLHYEHTWR-----QRCSGDATAAIGQQPCIPHTLHQVWLGGSMPSKFRDLRESWAKLH--------------------DG---WELRLWGGGDVEDFGLENRAAFDAATNYGEKSDIFRYEILHRHGGIYVDVDFLCLQSLQVMADNLDFFAGLANVGAVEINNGLIG 177

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: D7G7P2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P2_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 1.810e-42
Identity = 176/291 (60.48%), Postives = 192/291 (65.98%), Query Frame = 3

Query:  732 MRDIVNRIRDTCGPPCRPPVXXXXXXXXXXXXXXX-----VEAAARGGEIDCDCGSRGNGGSVVVGDPLSALMGALGGXXXXXXXXXXXXXXXGLLAGLLGGEDRARLEQAVTAVEPGSATETIVKTGPGVFTRAVMAWMVASAAGESGF--------GANGEAEECVLGRSGATSAVHREIPASGSGCSDGNGGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSLVMMVLPPSYLYPVPNNAVAATEGSLVGDGSESGVRERAGDFFSAESLAAHLWGRSWQ 1565
            MRDIVNRI+ +C        XXXXXXXXXXXXXXX     V AAA   +   D G RG      VGDPLSALMGALGG XXXXX          LL GLLGG+DRARL QAV  VE  SATETIVKTGPGVFTRAVMAWMV+SA GE G         G    A+E +   +G T+A+  ++               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         LPPSYLYPVPNNA AA  G L+GDG+ESGVRER G + S+ESLAAHLWGRSWQ
Sbjct:    1 MRDIVNRIKSSCXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRAAAGVTDAAGDGGGRGT----TVGDPLSALMGALGGEXXXXX----------LLTGLLGGDDRARLRQAVE-VEADSATETIVKTGPGVFTRAVMAWMVSSATGEDGAAPTTTDGSGTISTAQEEIFHSTG-TAALDTDVFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPSYLYPVPNNAAAAKAGLLIGDGTESGVRERVGGYLSSESLAAHLWGRSWQ 275

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: F0W3M3_9STRA (Surface protein Sur1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3M3_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.160e-38
Identity = 83/206 (40.29%), Postives = 114/206 (55.34%), Query Frame = 3

Query:  135 SVSTRPKMRWGFWSSHDKSWMQ-LVQQNYEKHHRTPRPPEKFTGEYVDSSGQPLIPFTIHHIWLGS-PLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWELRLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTRYEFYTGLSNTGTFELNNGLVGCRPGHPIMRDIV 746
            S+   P+ +W FWS  D+ W Q L+ Q+ E      R  +      VD++ +  IPF IH IWLG  P+P    +  E+W   H                        +WE +LWTD  +    L+N E ++ AGN+G+KSDILRYEILL+ GG+YVDVDF CL  F++L   + F TG+SNT   ELNNGL+ C   HPI+R++V
Sbjct:   33 SIKPNPECKWNFWSPDDRDWNQALLSQSTE------RLCDNQMFPTVDNAVR--IPFIIHQIWLGPHPIPAFCLQQMETWRQIHP-----------------------QWEYKLWTDTQVSTLKLQNKEHFDLAGNYGEKSDILRYEILLQFGGIYVDVDFKCLRLFQDLLQAFSFITGISNTDVVELNNGLIACTRNHPIVRELV 207

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: A0A813E7U9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E7U9_POLGL)

HSP 1 Score: 147 bits (372), Expect = 3.830e-37
Identity = 83/204 (40.69%), Postives = 104/204 (50.98%), Query Frame = 3

Query:  159 RWGFWSSHDKSWMQLVQQNYEKHHRTPRPPEKFTGEYVDSSGQPLIPFTIHHIWLGS-PLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWELRLWTDADIDAFGLEN----HEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTRYEFYTGLSNTGTFELNNGLVGCRPGHPIMRDIVNRI 755
            RWG WS  DK+W   +              +    E   S G+P+IP  +H IWLG   LP    +  + W  RH                         WE RLWTDAD +A  L++     EA+ AA N  +KSD+LR  I+L HGGLYVDVDF CL  F+ELH R  FYTG+SN   FELNNGL    PGHP++R +  R+
Sbjct:   39 RWGLWSPSDKAWHNFL--------------KNLWCEAATSEGRPVIPLRLHQIWLGPRQLPAECQQFAQGWRGRHPA-----------------------WEYRLWTDADAEAE-LQDLPRMAEAFRAAKNPAEKSDLLRLAIVLHHGGLYVDVDFECLRPFDELHDRVSFYTGISNVAAFELNNGLFAAAPGHPLLRYLCERV 204

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: A0A6G0WYT2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYT2_9STRA)

HSP 1 Score: 148 bits (373), Expect = 7.060e-37
Identity = 80/203 (39.41%), Postives = 112/203 (55.17%), Query Frame = 3

Query:  156 MRWGFWSSHDKSWMQLVQQNYEKHHRTPRPPEKFTGEYVDSSGQPLIPFTIHHIWLGSPLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWELRLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTR--YEFYTGLSNTGTFELNNGLVGCRPGHPIMRDIVNRIR 758
            MR+  W + D +W   + + +++        ++   E   S G P+IP  IH IWLG  L +      +SW + H         PD              WE  LWT+ +I+ + L+N  AY+ A NFG+KSDILRYEIL   GGLYVDVDF CL  F++LH     EFY GLSNT + E+NN L+GC P HPI++ +++ I+
Sbjct:    1 MRYKLWGAEDMAWHFHLSERFDE--------QRDLWEAPPSPGPPVIPKRIHQIWLGPALMDEFHSYIQSWKNHH---------PD--------------WEYTLWTEREIENWKLQNQAAYDMATNFGEKSDILRYEILETFGGLYVDVDFECLKPFDQLHENPTCEFYAGLSNTRSVEINNALIGCVPNHPILKAVISAIQ 172

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: A0A7S1CD16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD16_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.140e-33
Identity = 68/155 (43.87%), Postives = 89/155 (57.42%), Query Frame = 3

Query:  294 IPFTIHHIWLGSPLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWELRLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTRYEFYTGLSNTGTFELNNGLVGCRPGHPIMRDIVNRIR 758
            IP  +HH+WLG  LP   ARLR +W + H         P               W+  LW DA++ A  L N  A++AAGN+G+KSDILRYE+L   GG+YVDVD   +     LH   + Y G SNTGTFELNN +VGC   HP++R + +R+R
Sbjct:   30 IPRIVHHVWLGGRLPRRFARLRATWTTTH---------PPSRG-----------WQHVLWGDAEVAALTLRNRAAFDAAGNYGEKSDILRYELLWAFGGVYVDVDMQAVRPLTPLHRVCDLYVGFSNTGTFELNNAVVGCARHHPLLRRLADRVR 164

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: A0A7S4N7T0_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N7T0_GUITH)

HSP 1 Score: 136 bits (342), Expect = 2.010e-32
Identity = 73/204 (35.78%), Postives = 103/204 (50.49%), Query Frame = 3

Query:  153 KMRWGFWSSHD-----KSWMQLVQQNYEKHHRTPRPPE-KFTGEYVDSSGQPLIPFTIHHIWLGSPLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWELRLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTRYEFYTGLSNTGTFELNNGLVGCRPGHPIMRDIV 746
            KM+WG+W   D     K+   L ++N  K      P   +  G     +  P IP  IH IWLG  +PE     R +W+  H                        EW+  LWT+ D++   + N EAY+ A N G KSD+LR E++ R GGLY+D+DF CL SF+ LH   +FY GLSN G  E++NG+   R  HPI++ ++
Sbjct:    5 KMQWGWWFEDDEDFCWKTMRGLYEENVRKRMSMQSPVGGESPGSPSKETASPRIPRIIHQIWLGGNIPEQFLAWRNTWIDLHP-----------------------EWQHILWTEEDVEELAMLNPEAYKNAPNLGAKSDLLRLEVVWRFGGLYIDIDFECLKSFDVLHDHLDFYAGLSNVGAMEISNGIFAARKKHPILKKLL 185

[Close]

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Match: A0A7V1MPV4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Dependentiae bacterium TaxID=2030827 RepID=A0A7V1MPV4_9BACT)

HSP 1 Score: 135 bits (341), Expect = 2.970e-32
Identity = 79/192 (41.15%), Postives = 104/192 (54.17%), Query Frame = 3

Query:  174 SSHDKSWMQLVQQNYEKHHRTPRPPEKFTGEYVDSSGQPLIPFTIHHIWLGS-PLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWELRLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFLCLASFEELHTRYEFYTG---LSNTGTFELNNGLVGCRPGHPIMR 737
            +S D++W QL +Q Y+           +  + ++   QP IP  IH IW+G  P P     L+++W   H         PD              W+ +LWTDAD+    L N  AYE A N+GQKSDILRYEIL ++GGLYVD DF C  +F+  H   +FYTG   LSN G F L N L+GC PGHPI++
Sbjct:   48 ASEDENW-QLAKQLYKT----------YIIDNLEFVEQPRIPKIIHQIWVGPHPFPNKCKVLQKTWKKHH---------PD--------------WKYKLWTDADVKELDLINEAAYEKAKNYGQKSDILRYEILYKYGGLYVDTDFECFRAFDIFHHCLDFYTGIAGLSNKGAFGLINALIGCAPGHPIIK 205

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig775.16692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JQP8_9PHAE	1.680e-149	57.89	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FIJ5_ECTSI	1.600e-78	67.03	Surface protein Sur1 n=1 Tax=Ectocarpus siliculosu...	[more]
A0A836C8H1_9STRA	1.060e-42	42.93	Surface protein Sur1 (Fragment) n=1 Tax=Tribonema ...	[more]
D7G7P2_ECTSI	1.810e-42	60.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
F0W3M3_9STRA	3.160e-38	40.29	Surface protein Sur1 putative n=1 Tax=Albugo laiba...	[more]
A0A813E7U9_POLGL	3.830e-37	40.69	Hypothetical protein (Fragment) n=1 Tax=Polarella ...	[more]
A0A6G0WYT2_9STRA	7.060e-37	39.41	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A7S1CD16_9STRA	1.140e-33	43.87	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A7S4N7T0_GUITH	2.010e-32	35.78	Hypothetical protein n=2 Tax=Guillardia theta TaxI...	[more]
A0A7V1MPV4_9BACT	2.970e-32	41.15	Uncharacterized protein n=1 Tax=Candidatus Depende...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig775	contig	L-elsbetiae_contig775:18729..21782 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	258.1
Seed ortholog evalue	9.1e-66
Seed eggNOG ortholog	2880.D7FIJ5
Hectar predicted targeting category	other localisation
EggNOG free text desc.	Glycosyltransferase sugar-binding region containing DXD motif
EggNOG OGs	2S4FC@2759,COG3774@1
Ec32 ortholog description	Glycosyltransferase, DXD sugar-binding motif
Ec32 ortholog	Ec-00_000790.1
COG Functional cat.	M
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	5
Model size	1592
Cds size	1578
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig775.16692.1	prot_L-elsbetiae_contig775.16692.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig775 18729..21768 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816859.4449441-CDS-L-elsbetiae_contig775:18728..19264	1622816859.4449441-CDS-L-elsbetiae_contig775:18728..19264	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 18729..19264 -
1691683867.301746-CDS-L-elsbetiae_contig775:18728..19264	1691683867.301746-CDS-L-elsbetiae_contig775:18728..19264	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 18729..19264 -
1622816859.4620354-CDS-L-elsbetiae_contig775:19631..19978	1622816859.4620354-CDS-L-elsbetiae_contig775:19631..19978	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 19632..19978 -
1691683867.3137953-CDS-L-elsbetiae_contig775:19631..19978	1691683867.3137953-CDS-L-elsbetiae_contig775:19631..19978	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 19632..19978 -
1622816859.4742978-CDS-L-elsbetiae_contig775:20392..20532	1622816859.4742978-CDS-L-elsbetiae_contig775:20392..20532	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 20393..20532 -
1691683867.3237607-CDS-L-elsbetiae_contig775:20392..20532	1691683867.3237607-CDS-L-elsbetiae_contig775:20392..20532	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 20393..20532 -
1622816859.4841597-CDS-L-elsbetiae_contig775:20917..21222	1622816859.4841597-CDS-L-elsbetiae_contig775:20917..21222	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 20918..21222 -
1691683867.333436-CDS-L-elsbetiae_contig775:20917..21222	1691683867.333436-CDS-L-elsbetiae_contig775:20917..21222	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 20918..21222 -
1622816859.4956686-CDS-L-elsbetiae_contig775:21518..21768	1622816859.4956686-CDS-L-elsbetiae_contig775:21518..21768	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 21519..21768 -
1691683867.34661-CDS-L-elsbetiae_contig775:21518..21768	1691683867.34661-CDS-L-elsbetiae_contig775:21518..21768	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig775 21519..21768 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816859.5069728-UTR-L-elsbetiae_contig775:21768..21782	1622816859.5069728-UTR-L-elsbetiae_contig775:21768..21782	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig775 21769..21782 -
1691683867.3568206-UTR-L-elsbetiae_contig775:21768..21782	1691683867.3568206-UTR-L-elsbetiae_contig775:21768..21782	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig775 21769..21782 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig775:18729..21782-
coding sequence from alignment at L-elsbetiae_contig775:18729..21782-

protein sequence of mRNA_L-elsbetiae_contig775.16692.1

>prot_L-elsbetiae_contig775.16692.1 ID=prot_L-elsbetiae_contig775.16692.1|Name=mRNA_L-elsbetiae_contig775.16692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=526bp
MMRTADGKYFNGDGVGTNTSPPPEFKACFSVPSTATGAVSSVSTRPKMRW
GFWSSHDKSWMQLVQQNYEKHHRTPRPPEKFTGEYVDSSGQPLIPFTIHH
IWLGSPLPEALARLRESWLSRHRHTGSRRTGPDQESGEDWCGEGAGEWEL
RLWTDADIDAFGLENHEAYEAAGNFGQKSDILRYEILLRHGGLYVDVDFL
CLASFEELHTRYEFYTGLSNTGTFELNNGLVGCRPGHPIMRDIVNRIRDT
CGPPCRPPVPLPLPLPPSSSSSPAVEAAARGGEIDCDCGSRGNGGSVVVG
DPLSALMGALGGGGGVTGSGSAATAGGGLLAGLLGGEDRARLEQAVTAVE
PGSATETIVKTGPGVFTRAVMAWMVASAAGESGFGANGEAEECVLGRSGA
TSAVHREIPASGSGCSDGNGGFAGTAAKASSCASSPLSHESHGSAGTTAA
TTAPSAAGSLVMMVLPPSYLYPVPNNAVAATEGSLVGDGSESGVRERAGD
FFSAESLAAHLWGRSWQGKDGKPKS*

mRNA from alignment at L-elsbetiae_contig775:18729..21782-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig775.16692.1 ID=mRNA_L-elsbetiae_contig775.16692.1|Name=mRNA_L-elsbetiae_contig775.16692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3054bp|location=Sequence derived from alignment at L-elsbetiae_contig775:18729..21782- (Laminarionema elsbetiae ELsaHSoW15)
GTGCATACTGCAGGATGATGAGGACTGCCGACGGCAAATATTTTAATGGC
GATGGGGTTGGTACTAATACCTCCCCGCCTCCTGAGTTTAAGGCCTGTTT
CTCCGTGCCCTCCACCGCTACTGGTGCTGTGTCTTCAGTGTCCACAAGGC
CAAAGATGCGGTGGGGCTTCTGGTCCTCGCACGACAAGTCGTGGATGCAG
CTTGTACAACAAAATTACGAGAAGCATCACCGCACACCACGGCCTCCAGA
AAAATTCACCGGAGGTGTGTGTGTGCGGGGGGTGCTCCCACGATGTCGTT
GGTAACCCACAGCGTATGCAGTATGCACGTATTTTTGTTGTTTCTCCGCC
TTGTGTTGCAGTCGTGAAAGCATCACCATGCTGCTCGCATTCTTGCTCGC
ACTGCTGCTTCTCGTATATATATACTGTTAGCAATTCCGTACTCCCCGCA
ACTCTCCTCCACCCCCCTTCCACGCCAGCAGCAGGCAGCCTCACACACAC
ACACGGCGGCGCGCCCGCTCCGCTGCAACCCTTTGTCTCGTCTGTCCGCT
CTTCACGTAGAGTATGTAGACAGCAGTGGACAGCCCCTTATCCCCTTCAC
CATCCACCACATCTGGCTGGGTAGCCCGCTCCCCGAGGCCCTGGCGCGCC
TCCGTGAGTCGTGGCTGTCGAGACATCGACACACCGGCTCCAGGCGCACC
GGGCCCGACCAGGAAAGCGGGGAGGACTGGTGTGGGGAGGGAGCAGGGGA
GTGGGAGCTTCGGCTGTGGACGGACGCGGACATAGACGCCTTCGGTCTGG
AGAACCATGAAGCCTACGAGGCCGCGGGAAACTTCGGGCAAAAGTCGGAC
ATCCTGCGTTACGAGGTTAGACAGAGTACGCTTCTTGCGTGCGTGCGTGC
GTGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTTTTCCTTACTGCGTTTGTGCATGTTTAGATGGGAGGCTACGAGTAG
AGGTGCACGCAATCGGGTAAACGACGTTTACGCGCCTTGCTCGCCTATCT
CCGGGCACACGCTCTCTGCTGAAGGGTAACAAGCGGCGGTCTCGGATGAA
ACCTGAAATGTACTTCGTTTATCACCAAAGGCCTCTACTACTGTAGCTTC
CCGAAGTACCACCCTCGTCTCCCGCCCCGGCCGTTCGGCCCGCCCCTGGC
CCTCGCCGCTCTTTCTGTTCTGATTTCTTCTTCCGTATATACGTGTCCAG
ATCCTTCTTCGACACGGTGGTCTGTACGTGGACGTAGACTTCCTCTGCCT
GGCCTCGTTCGAGGAACTGCACACACGCTACGAGTTCTACACGGGCTTGT
CCAACACGGGCACTTTCGAGTTGAACAACGGTCTCGTAGGGTGAGCGAAG
CGAGAGCTGAGCATAGTGATAACCATCACCAGTAGCAAGTGCTTGCTGCG
CCATCCATGCCCGACCTCGGATGAATGAGCCAACGCGTCCTGAAGCGTGC
TTGTGCAGATATAATCCACAGCCGCACCATATTTCAGACGCTCGATGCGC
GCCTTTCACGAGCACCCCACAACCACACAGCAGATACACCAGACCAGTAG
GGAAGGGTTGCGCAAGAAGAGAAGTGCTGGTTCGCTCACCCAGCGGCGAG
CGGGGCTGCTCTTTGCATACGTATCACGTAGTTTACCACCCCCCCCAACA
GTCTGAAATCAAGACACCCCCGAAATGATCGGAGCTGAGCAACATTCCCT
CTCCTGTGCCTTCATTATACCGTCCCCACACACACACCGATTGCTCCTGC
CCAGCTGCCGCCCCGGCCATCCGATCATGCGCGACATCGTGAACAGAATC
CGGGACACTTGTGGCCCGCCTTGCCGCCCCCCCGTTCCTCTTCCTCTTCC
TCTTCCCCCGTCCTCGTCTTCATCGCCGGCGGTGGAGGCGGCGGCGAGGG
GCGGAGAGATCGATTGCGACTGTGGCAGCCGGGGCAACGGAGGATCGGTT
GTAGTAGGCGATCCGCTGTCGGCGTTGATGGGAGCGTTAGGAGGGGGCGG
GGGCGTGACAGGGTCAGGGTCAGCGGCAACGGCAGGAGGAGGGTTGCTGG
CGGGCTTGCTCGGCGGGGAGGATCGTGCCCGGTTGGAGCAAGCTGTGACA
GGTCAGAGGACGGAAGGTGGTTCTTGCTTTGTCCTCTCAGAAGCTCGTCG
GTCGGCCTGGGCTGATGAAAGCCTGGGCGCGTGCTGGTGTTTGTCGTTCC
TCCTGCGCGCTCGTTGTCGTCGTCTGGGATAGATGGAGTAAATATGGTAC
TCAAGAAGCGGGCCAGGAACGGAAAGTGTCGGGCGTGTCTTCGGTTCACT
GTGTCGAGTCTGCTGTTTTGTTGCTCTTGGGTGCGGTACTGCTGTGGCCG
TGCCTGCCTCGACGAGTCATTTCCTGGCCCCTTGAACTTACTTTTGCGGT
GGCCCCTCTCCCCTCCTCGCAACCGAAAACGAACCAAACAACACGTTGCG
ACCCCCTACTCGATCCAGCAGTCGAGCCGGGGAGCGCAACGGAAACCATC
GTCAAGACCGGTCCCGGAGTCTTCACGAGAGCGGTTATGGCGTGGATGGT
TGCCTCCGCGGCAGGGGAGAGTGGTTTCGGCGCCAATGGCGAAGCTGAGG
AATGTGTGCTTGGGAGAAGTGGTGCCACCAGCGCTGTTCACCGGGAAATT
CCTGCTTCTGGATCTGGCTGTAGCGACGGCAACGGTGGCTTTGCTGGCAC
TGCCGCCAAAGCTTCCAGTTGTGCTTCGTCGCCGCTTTCCCATGAAAGCC
ACGGAAGCGCCGGCACGACCGCCGCTACAACCGCTCCATCGGCCGCCGGC
TCGCTGGTGATGATGGTTCTACCGCCTTCGTACCTCTACCCGGTCCCCAA
CAACGCCGTCGCCGCCACAGAAGGCAGTCTGGTCGGGGATGGGTCGGAAA
GCGGGGTCCGTGAGCGCGCGGGCGATTTTTTTTCCGCGGAGTCACTGGCC
GCTCACTTGTGGGGAAGGTCTTGGCAGGGCAAGGACGGGAAGCCGAAATC
GTGA

Coding sequence (CDS) from alignment at L-elsbetiae_contig775:18729..21782-

>mRNA_L-elsbetiae_contig775.16692.1 ID=mRNA_L-elsbetiae_contig775.16692.1|Name=mRNA_L-elsbetiae_contig775.16692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3156bp|location=Sequence derived from alignment at L-elsbetiae_contig775:18729..21782- (Laminarionema elsbetiae ELsaHSoW15)
ATGATGAGGACTGCCGACGGCAAATATTTTAATGGCGATGGGGTTGGTAC
TAATACCTCCCCGCCTCCTGAGTTTAAGGCCTGTTTCTCCGTGCCCTCCA
CCGCTACTGGTGCTGTGTCTTCAGTGTCCACAAGGCCAAAGATGCGGTGG
GGCTTCTGGTCCTCGCACGACAAGTCGTGGATGCAGCTTGTACAACAAAA
TTACGAGAAGCATCACCGCACACCACGGCCTCCAGAAAAATTCACCGGAG
ATGATGAGGACTGCCGACGGCAAATATTTTAATGGCGATGGGGTTGGTAC
TAATACCTCCCCGCCTCCTGAGTTTAAGGCCTGTTTCTCCGTGCCCTCCA
CCGCTACTGGTGCTGTGTCTTCAGTGTCCACAAGGCCAAAGATGCGGTGG
GGCTTCTGGTCCTCGCACGACAAGTCGTGGATGCAGCTTGTACAACAAAA
TTACGAGAAGCATCACCGCACACCACGGCCTCCAGAAAAATTCACCGGAG
AGTATGTAGACAGCAGTGGACAGCCCCTTATCCCCTTCACCATCCACCAC
ATCTGGCTGGGTAGCCCGCTCCCCGAGGCCCTGGCGCGCCTCCGTGAGTC
GTGGCTGTCGAGACATCGACACACCGGCTCCAGGCGCACCGGGCCCGACC
AGGAAAGCGGGGAGGACTGGTGTGGGGAGGGAGCAGGGGAGTGGGAGCTT
CGGCTGTGGACGGACGCGGACATAGACGCCTTCGGTCTGGAGAACCATGA
AGCCTACGAGGCCGCGGGAAACTTCGGGCAAAAGTCGGACATCCTGCGTT
ACGAGAGTATGTAGACAGCAGTGGACAGCCCCTTATCCCCTTCACCATCC
ACCACATCTGGCTGGGTAGCCCGCTCCCCGAGGCCCTGGCGCGCCTCCGT
GAGTCGTGGCTGTCGAGACATCGACACACCGGCTCCAGGCGCACCGGGCC
CGACCAGGAAAGCGGGGAGGACTGGTGTGGGGAGGGAGCAGGGGAGTGGG
AGCTTCGGCTGTGGACGGACGCGGACATAGACGCCTTCGGTCTGGAGAAC
CATGAAGCCTACGAGGCCGCGGGAAACTTCGGGCAAAAGTCGGACATCCT
GCGTTACGAGATCCTTCTTCGACACGGTGGTCTGTACGTGGACGTAGACT
TCCTCTGCCTGGCCTCGTTCGAGGAACTGCACACACGCTACGAGTTCTAC
ACGGGCTTGTCCAACACGGGCACTTTCGAGTTGAACAACGGTCTCGTAGG
ATCCTTCTTCGACACGGTGGTCTGTACGTGGACGTAGACTTCCTCTGCCT
GGCCTCGTTCGAGGAACTGCACACACGCTACGAGTTCTACACGGGCTTGT
CCAACACGGGCACTTTCGAGTTGAACAACGGTCTCGTAGGCTGCCGCCCC
GGCCATCCGATCATGCGCGACATCGTGAACAGAATCCGGGACACTTGTGG
CCCGCCTTGCCGCCCCCCCGTTCCTCTTCCTCTTCCTCTTCCCCCGTCCT
CGTCTTCATCGCCGGCGGTGGAGGCGGCGGCGAGGGGCGGAGAGATCGAT
TGCGACTGTGGCAGCCGGGGCAACGGAGGATCGGTTGTAGTAGGCGATCC
GCTGTCGGCGTTGATGGGAGCGTTAGGAGGGGGCGGGGGCGTGACAGGGT
CAGGGTCAGCGGCAACGGCAGGAGGAGGGTTGCTGGCGGGCTTGCTCGGC
GGGGAGGATCGTGCCCGGTTGGAGCAAGCTGTGACAGCTGCCGCCCCGGC
CATCCGATCATGCGCGACATCGTGAACAGAATCCGGGACACTTGTGGCCC
GCCTTGCCGCCCCCCCGTTCCTCTTCCTCTTCCTCTTCCCCCGTCCTCGT
CTTCATCGCCGGCGGTGGAGGCGGCGGCGAGGGGCGGAGAGATCGATTGC
GACTGTGGCAGCCGGGGCAACGGAGGATCGGTTGTAGTAGGCGATCCGCT
GTCGGCGTTGATGGGAGCGTTAGGAGGGGGCGGGGGCGTGACAGGGTCAG
GGTCAGCGGCAACGGCAGGAGGAGGGTTGCTGGCGGGCTTGCTCGGCGGG
GAGGATCGTGCCCGGTTGGAGCAAGCTGTGACAGCAGTCGAGCCGGGGAG
CGCAACGGAAACCATCGTCAAGACCGGTCCCGGAGTCTTCACGAGAGCGG
TTATGGCGTGGATGGTTGCCTCCGCGGCAGGGGAGAGTGGTTTCGGCGCC
AATGGCGAAGCTGAGGAATGTGTGCTTGGGAGAAGTGGTGCCACCAGCGC
TGTTCACCGGGAAATTCCTGCTTCTGGATCTGGCTGTAGCGACGGCAACG
GTGGCTTTGCTGGCACTGCCGCCAAAGCTTCCAGTTGTGCTTCGTCGCCG
CTTTCCCATGAAAGCCACGGAAGCGCCGGCACGACCGCCGCTACAACCGC
TCCATCGGCCGCCGGCTCGCTGGTGATGATGGTTCTACCGCCTTCGTACC
TCTACCCGGTCCCCAACAACGCCGTCGCCGCCACAGAAGGCAGTCTGGTC
GGGGATGGGTCGGAAAGCGGGGTCCGTGAGCGCGCGGGCGATTTTTTTTC
CGCGGAGTCACTGGCCGCTCACTTGTGGGGAAGGTCTTGGCAGGGCAAGG
ACGGGAAGCCGAAATCGTGACAGTCGAGCCGGGGAGCGCAACGGAAACCA
TCGTCAAGACCGGTCCCGGAGTCTTCACGAGAGCGGTTATGGCGTGGATG
GTTGCCTCCGCGGCAGGGGAGAGTGGTTTCGGCGCCAATGGCGAAGCTGA
GGAATGTGTGCTTGGGAGAAGTGGTGCCACCAGCGCTGTTCACCGGGAAA
TTCCTGCTTCTGGATCTGGCTGTAGCGACGGCAACGGTGGCTTTGCTGGC
ACTGCCGCCAAAGCTTCCAGTTGTGCTTCGTCGCCGCTTTCCCATGAAAG
CCACGGAAGCGCCGGCACGACCGCCGCTACAACCGCTCCATCGGCCGCCG
GCTCGCTGGTGATGATGGTTCTACCGCCTTCGTACCTCTACCCGGTCCCC
AACAACGCCGTCGCCGCCACAGAAGGCAGTCTGGTCGGGGATGGGTCGGA
AAGCGGGGTCCGTGAGCGCGCGGGCGATTTTTTTTCCGCGGAGTCACTGG
CCGCTCACTTGTGGGGAAGGTCTTGGCAGGGCAAGGACGGGAAGCCGAAA
TCGTGA