mRNA_L-elsbetiae_contig772.16669.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: D7G3E6_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E6_ECTSI) HSP 1 Score: 491 bits (1264), Expect = 1.650e-170 Identity = 241/282 (85.46%), Postives = 255/282 (90.43%), Query Frame = 3 Query: 183 PEGATGAKEGKADVVSEEVCQSIKKGMRIVSDVEHTRTDGMVFKFELDLMYALAGEKATARAPPGLCLANCQRADCDKTEEPNGQTFCCCSKCGAKYCCRECQVSDWKKDHKAMCSQLREMRDGGTGGSRAPLDRQSVVARVLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEYKEKDALQLNLDDTD 1028 P+ G K K VVS EVC+SIKKGMRI+SD+E TR DGMVFKFELDLMYALAGEKATARAPPGLCLA+CQRA C+KTEEP G+ FCCCSKCGAKYC RECQV DWKKDHKAMC QL+EMR G GG RAPLDRQSVVARVLGRVRLYLCPF VCHGEALGRGFVFVQ TPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLE AV+SY+ K E+VVLFRARCGYMAVVV+PLVP W+VCRQLG+EYKEKDALQLNLDDTD Sbjct: 21 PKEEEGVKGDKTAVVSGEVCESIKKGMRIISDIEKTRADGMVFKFELDLMYALAGEKATARAPPGLCLASCQRAACNKTEEPTGRPFCCCSKCGAKYCSRECQVIDWKKDHKAMCGQLKEMRGGDAGGGRAPLDRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQ-TPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLDDTD 301
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A835Z3P7_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3P7_9STRA) HSP 1 Score: 304 bits (778), Expect = 2.540e-97 Identity = 151/283 (53.36%), Postives = 203/283 (71.73%), Query Frame = 3 Query: 177 SGPEGATGAKEG-KADVVSEEVCQSIKKGMRIVSDVEHTRTDGMVFKFELDLMYALAGEKATARAPPGLCLANCQRADCDKTEEPNGQTFCCCSKCGAKYCCRECQVSDWKKDHKAMCSQLREMRDGGTGGSRAPLDRQSVVARVLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEYKEKDALQLNLDD 1022 S + AT A G K + ++E+ +++G+ IV +E R DGMVF FE DL++ L+G+KA A+APPGL L CQ+ C+ TE G+ F CS CG++YCCRECQVSDWK HK MC+QL+ + G A +D++ V+R L +VRLYLCPF VCHG A+G GFVFVQ +PN +LEL Y+ PV S GR L RS++LH++S GEFV+AV+QDDFEL +R+PLE A+ + + + E+VVL RARCGY+ VV +PLVPE +VCR L +Y+ +DALQLNLD+ Sbjct: 2 SSAKAATAADGGSKKKIGTKELEAKVQEGLDIVQQIETGRADGMVFHFEGDLLFELSGDKAVAKAPPGLQLHKCQKPTCENTETMGGKPFNQCSGCGSRYCCRECQVSDWKSLHKPMCAQLKALSAG------AKVDKRDAVSRTLSKVRLYLCPFAVCHGSAIGPGFVFVQ-SPNSLLELNYMGPVTSAGRALQRSLVLHYMSPGEFVEAVMQDDFELMTVRTPLEAAIAAADAQREVVVLMRARCGYICVVTMPLVPEIAVCRALAGDYEGRDALQLNLDE 277
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A448ZP53_9STRA (MYND-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZP53_9STRA) HSP 1 Score: 151 bits (382), Expect = 6.760e-39 Identity = 82/199 (41.21%), Postives = 122/199 (61.31%), Query Frame = 3 Query: 450 CSKCG-AKYCCRECQVSDWKKD-HKAMCSQLREMRDGGTGGSRAPLD---RQSVVARVLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEY---KEKDALQLNLDD 1022 C++CG A YC RECQ DWK HK C + ++ PLD ++++ + R+R Y+CP+ V LG GF+F+Q + + +L P + GR + RS++LHFL++GEF V +DDFEL ++R+PL+ AV+SY+P+ E+V+L R RCG MA+ LVP++ +C+QL +Y ALQLNLDD Sbjct: 66 CARCGVAAYCSRECQAGDWKAGRHKMACPSYARV-------AKTPLDGDTKKAIRNELFARIRFYVCPYAVHRTAELGSGFLFLQ-SDRTLRDLSPYIPKDCTGRAIVRSVLLHFLTLGEFDSEVCKDDFELAMMRTPLKEAVESYDPEKEVVLLCRFRCGNMALGRAVLVPDYPICKQLAKDYYTGNTAGALQLNLDD 256
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A7S0UGY3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGY3_9STRA) HSP 1 Score: 151 bits (381), Expect = 6.970e-39 Identity = 80/199 (40.20%), Postives = 124/199 (62.31%), Query Frame = 3 Query: 450 CSKCG-AKYCCRECQVSDWKKD-HKAMCSQLREMRDGGTGGSRAPL---DRQSVVARVLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEYKEKD---ALQLNLDD 1022 CSKCG A YC RECQ+ DWK HK C + ++APL ++++ + R+R Y+CP+ V LGRGF+F+Q T + ++ P + G + RS++LHFL++GEF V + DFEL ++R+PL+ AV++Y+ + E+V+L R RCG M++ LVP++ +C++LG +Y ++ ALQLNLDD Sbjct: 56 CSKCGVAAYCSRECQIQDWKAGRHKMACPSYARV-------AKAPLCDKTKETIRNELFARIRFYVCPYAVFRTAELGRGFLFLQ-TDRTLEDMSLYIPKDCTGHTITRSVLLHFLTLGEFDSEVCRTDFELALMRTPLKEAVETYDTEQEVVLLCRYRCGNMSLGRAALVPDYRICKKLGQDYYSENSAGALQLNLDD 246
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A1E7FEW3_9STRA (MYND-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW3_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.070e-38 Identity = 80/201 (39.80%), Postives = 122/201 (60.70%), Query Frame = 3 Query: 453 SKCG----AKYCCRECQVSDWKKD-HKAMCSQLREMRDGGTGGSRAPLD---RQSVVARVLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEYKEKD---ALQLNLDD 1022 SKCG A YC R+CQ+SDWK HK C + ++ P+ +Q + + R+R Y+CP+ V LGRGF+F+Q T + +L P + G + RSI+LHFL++GEF V ++DFEL ++R+PL+ A+DSY + E+V+L R RCG M++ LVP++ +C++LG +Y ++ A+QLNLDD Sbjct: 34 SKCGKCQVAAYCSRDCQMSDWKTGRHKMACPSYARV-------AQTPISDKTKQEIRNELFQRIRFYVCPYAVLRTSELGRGFLFLQ-TDKTLQDLSVYIPKDCTGHTVTRSILLHFLTLGEFDSEVCKEDFELAMMRTPLKDAIDSYETEKEVVILCRFRCGNMSLGKAILVPDYGICKKLGQDYYAENPAGAVQLNLDD 226
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A7S2R2L0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2L0_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.280e-35 Identity = 85/213 (39.91%), Postives = 125/213 (58.69%), Query Frame = 3 Query: 450 CSKCG-AKYCCRECQVSDWKKD------HKAMCSQLREMRDGGTGGSRAPLDRQSVVARVLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEY---LRPVNSNGRRL------DRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEY------KEKDALQLNLDD 1022 CSKC A+YC R+CQV+DWKK HK C+ L+ R G +P D+ S ++ R+R Y CP+ V LGRGF+F+Q T + + E+ L P+++ RS++LH+L++GEF V +DDFEL +R L+ AVDS++ + ++VVL R RCG++AV PLVP++ +C+ LG +Y A+QLNLDD Sbjct: 72 CSKCHVARYCSRDCQVADWKKSPNGGTAHKFTCAALK--RVGIHMQITSPDDQASARQDIVFRIRFYACPYAVNKSITLGRGFLFLQGT-STLAEMSLPTTLNPLHNXXXXXXXXXVKQRSVLLHYLTLGEFDSEVCRDDFELATVRDRLKQAVDSHDIEKDMVVLMRFRCGHVAVGTAPLVPDYGLCKSLGQQYYGTGEGASSGAIQLNLDD 281
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A7S0F684_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F684_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.310e-35 Identity = 82/212 (38.68%), Postives = 126/212 (59.43%), Query Frame = 3 Query: 408 CDKTEEPNGQTFCCCSKCG-AKYCCRECQVSDWKKD-HKAMCSQLREMRDGGTGGSRAPLDRQSVVARVLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRLDR-SIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEYKEKD----ALQLNLDD 1022 C K E N + CSKC AKYC R+CQV+DWK HK +C + + D + A + +V A + R+R Y CP+ V LG+GF+FVQ + + +L P + G + R SI++HFL++GE+ V +DDFE+ R+ L V+ Y+ + E+V+L+R RCG++AV LVP++ +C+QLG +Y + + A+QLNLD+ Sbjct: 63 CGKHESENAKLSK-CSKCQTAKYCSRDCQVNDWKDGRHKLVCKSYQRLNDDFDNNADA---KAAVRAELYARIRFYACPYAVHKTTQLGKGFLFVQSNMS-LRDLSIPIPKDVTGVAMPRRSILMHFLTLGEYDSEVCRDDFEMAEARTKLSQIVEEYDEEKEVVLLYRMRCGHVAVGRAVLVPDYGICKQLGRDYYDSNNSAGAVQLNLDE 269
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A1Z5JUW9_FISSO (MYND-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUW9_FISSO) HSP 1 Score: 142 bits (357), Expect = 1.330e-35 Identity = 84/197 (42.64%), Postives = 122/197 (61.93%), Query Frame = 3 Query: 450 CSKCG-AKYCCRECQVSDWKKDHKAMCSQLREMRDGGTGGSRAPLDRQSVVAR--VLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEYKEK---DALQLNLDD 1022 CS+C A YC +ECQ+ DWK+ HK C+ + R G P D S AR VL ++RLY P+ V +ALGRGF+F+Q T + L + GR +RS++LH+L++GE+ V +DDFEL +R+ L+ AV+ Y+ + ++VVL R RCG++AV ++PL E++VC QLG EY + AL+L LDD Sbjct: 48 CSQCHVATYCSKECQIQDWKQRHKKYCAAYQ--RIDAQGRWNTP-DDDSAHARHHVLHQIRLYAMPYAVYQMQALGRGFLFIQST-------QTLAALTLPGR--NRSVLLHYLTLGEYDAEVCRDDFELTAVRTCLQKAVNDYDAQQQMVVLMRFRCGHVAVGIIPLSLEFAVCLQLGKEYYQNVTAGALELQLDD 232
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A7S2A9V4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9V4_TRICV) HSP 1 Score: 140 bits (354), Expect = 9.180e-35 Identity = 84/197 (42.64%), Postives = 114/197 (57.87%), Query Frame = 3 Query: 465 AKYCCRECQVSDWKKD----HKAMCSQLREMRDGGTGGSRAPLDRQSVVARVLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRL--DRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEYKE-----KDALQLNLDD 1022 A YC R+CQVSDWK HK C+ R R G R D+ + VL RVR Y P+ V LGRGF+FVQ + EL P +GR L +RS+++HFL+MGE+ V +DDFE+ +R L+ AV +Y+ + E VL R RCG++AV + LVPE+ VC+ LG EY + + ++QLNLDD Sbjct: 75 APYCSRDCQVSDWKSGTGGGHKHHCASYR--RVGTEFALRTDDDKAAARDEVLRRVRFYAFPYAVHRSSTLGRGFLFVQSGCT-LAELSLPNPKRPDGRPLGRERSVLMHFLTMGEYDLEVCRDDFEMASVRGELKDAVKAYDERKEAAVLVRFRCGHVAVGLATLVPEYGVCKALGREYYQGTVGAEGSVQLNLDD 268
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Match: A0A1Z5K1R0_FISSO (MYND-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1R0_FISSO) HSP 1 Score: 134 bits (336), Expect = 2.370e-32 Identity = 79/202 (39.11%), Postives = 118/202 (58.42%), Query Frame = 3 Query: 447 CCSKCGAKYCCRECQVSDWKKDHKAMCSQLREMRDGG-----TGGSRAPLDRQSVVAR--VLGRVRLYLCPFGVCHGEALGRGFVFVQQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLETAVDSYNPKTEIVVLFRARCGYMAVVVLPLVPEWSVCRQLGVEYKEK---DALQLNLDD 1022 C A YC +ECQ+ DW+K HK C+ + + G +D SV+AR V ++RLY P+ + LGRGF+F+Q T + L + GR +RS++LH+L++GE+ V +DDFEL +R+ L+ AV+ Y+ + ++VVL R RCG++AV V+PL E++VC QLG EY + AL+L LDD Sbjct: 63 CSQXXXAIYCSKECQIQDWRKKHKKYCAAYQRIDTHGHWKTPDNDVDDDVDDYSVLARHHVWHQIRLYAMPYAAHQMQTLGRGFLFLQST-------QTLVALTLPGR--NRSVLLHYLTLGEYDAEVCRDDFELTAVRTCLQKAVNDYDAQQQMVVLMRFRCGHVAVGVIPLSLEYAVCLQLGKEYYQNVTAGALELQLDD 255 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig772.16669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig772.16669.1 >prot_L-elsbetiae_contig772.16669.1 ID=prot_L-elsbetiae_contig772.16669.1|Name=mRNA_L-elsbetiae_contig772.16669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=314bp MNEANGSGVAPAVVVEDVRESIEGMEVKGSGPEGATGAKEGKADVVSEEVback to top mRNA from alignment at L-elsbetiae_contig772:19228..22257- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig772.16669.1 ID=mRNA_L-elsbetiae_contig772.16669.1|Name=mRNA_L-elsbetiae_contig772.16669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3030bp|location=Sequence derived from alignment at L-elsbetiae_contig772:19228..22257- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig772:19228..22257- >mRNA_L-elsbetiae_contig772.16669.1 ID=mRNA_L-elsbetiae_contig772.16669.1|Name=mRNA_L-elsbetiae_contig772.16669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1884bp|location=Sequence derived from alignment at L-elsbetiae_contig772:19228..22257- (Laminarionema elsbetiae ELsaHSoW15)back to top |