prot_L-elsbetiae_contig7716.16661.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7716.16661.1
Unique Nameprot_L-elsbetiae_contig7716.16661.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
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BLAST of mRNA_L-elsbetiae_contig7716.16661.1 vs. uniprot
Match: A0A6H5L9K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9K7_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 6.040e-45
Identity = 95/149 (63.76%), Postives = 110/149 (73.83%), Query Frame = 0 
Query:   14 GPCVRFEGITVELSSFSGCQLDFGKSGSLVLSLDAFTGTITLQSP-SSHSSPAPKSRGVGEDNF-AHSLPLCTTGSEAGSLGVLDGADDSEAAAMDHTDFDMALSQLEQGDSPPKSFSGAAXXXXXXAGRSPTNILFDSPSAMRQACEG 160
            GP +RFEGIT+ELSSFSGCQ DFGKSG+LVLS + FTGT++LQS  SS  S  PK RG G     +++LPLC T SEAGSLGVLDGA   EA AMD +D+DMALSQLE GDSP  SFS  A      A RSP+  +F+SPS +RQACEG
Sbjct:   30 GPSIRFEGITLELSSFSGCQFDFGKSGNLVLSFNGFTGTVSLQSSLSSSGSSTPKIRGGGARGARSYALPLCCTSSEAGSLGVLDGA---EAVAMDQSDYDMALSQLEHGDSPKSSFSATAAGAA--ASRSPSTAMFNSPSTLRQACEG 173
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BLAST of mRNA_L-elsbetiae_contig7716.16661.1 vs. uniprot
Match: D8LL74_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL74_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 4.260e-14
Identity = 41/60 (68.33%), Postives = 48/60 (80.00%), Query Frame = 0 
Query:   14 GPCVRFEGITVELSSFSGCQLDFGKSGSLVLSLDAFTGTITLQSP-SSHSSPAPKSRGVG 72
            GP +RFEGIT+ELSSFSGCQ DFGKSG+LVLS + +TGT++LQS  SS  S  PK RG G
Sbjct:   31 GPSIRFEGITLELSSFSGCQFDFGKSGNLVLSFNGYTGTVSLQSSLSSSGSSTPKIRGEG 90
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7716.16661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L9K7_9PHAE6.040e-4563.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL74_ECTSI4.260e-1468.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7716contigL-elsbetiae_contig7716:6607..8090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7716.16661.1mRNA_L-elsbetiae_contig7716.16661.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7716 3137..8090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7716.16661.1 ID=prot_L-elsbetiae_contig7716.16661.1|Name=mRNA_L-elsbetiae_contig7716.16661.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
MVSGGGGGGGGGDGPCVRFEGITVELSSFSGCQLDFGKSGSLVLSLDAFT
GTITLQSPSSHSSPAPKSRGVGEDNFAHSLPLCTTGSEAGSLGVLDGADD
SEAAAMDHTDFDMALSQLEQGDSPPKSFSGAAAAAAAAAGRSPTNILFDS
PSAMRQACEGER
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