mRNA_L-elsbetiae_contig7715.16660.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: D7FNE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI) HSP 1 Score: 402 bits (1034), Expect = 5.280e-129 Identity = 218/278 (78.42%), Postives = 240/278 (86.33%), Query Frame = 1 Query: 49 LLAAFTNPDNEVRRRAEAAWEDLKLRLPDEVLENVCAILGR-EGGDAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQGRTQIGVKAALLGRLTKEPVAHIRRKLTHAIGQLAGISSGTAEWPELMALTVALCDAKQPSSEMRVVGLDLVNILAEFCPGMLSPHQAGLLQMFGASLDDGSIGVRVAALKAACSFLQDSLPGPSAAAASSLVPQMMSVLEASIYFHLWCATVNTGDESAAGDVLEALNVIAANQPLLLLGDP--RSLDMVGAAMLSLAASP 873 LL AFT+PDN VRRRAE AWED+K+RLPD+VLE VCA+LG+ +GG+ GE GLRAMAAVLLRTLFD+RSDVWFRVQ +TQ GVKA LL RLTKEPVAHIRRKLTHAIGQLAGISS T EWPELMALTVALCDA Q S EM+VVGLDLVNILAEFCPGM+SPHQ GLLQMFGASL+D +IGVRVAALKAACSFLQDSL GPSAA A SLVP++MSV+E ATVN GDESAAGDVLEALNVIAANQPLLLLG+ ++L+MV AML+LA SP Sbjct: 13 LLGAFTSPDNGVRRRAEEAWEDMKMRLPDQVLEQVCAVLGQADGGEGGE--GLRAMAAVLLRTLFDIRSDVWFRVQQQTQAGVKATLLDRLTKEPVAHIRRKLTHAIGQLAGISSATGEWPELMALTVALCDAAQQSPEMKVVGLDLVNILAEFCPGMMSPHQDGLLQMFGASLEDPTIGVRVAALKAACSFLQDSLSGPSAAVAPSLVPRIMSVVE---------ATVNAGDESAAGDVLEALNVIAANQPLLLLGESGDQTLEMVSTAMLTLAGSP 279
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: A0A6H5JCW6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW6_9PHAE) HSP 1 Score: 343 bits (880), Expect = 7.790e-113 Identity = 191/250 (76.40%), Postives = 213/250 (85.20%), Query Frame = 1 Query: 136 EVLENVCAILGR-EGGDAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQGRTQIGVKAALLGRLTKEPVAHIRRKLTHAIGQLAGISSGTAEWPELMALTVALCDAKQPSSEMRVVGLDLVNILAEFCPGMLSPHQAGLLQMFGASLDDGSIGVRVAALKAACSFLQDSLPGPSAAAASSLVPQMMSVLEASIYFHLWCATVNTGDESAAGDVLEALNVIAANQPLLLLGDP--RSLDMVGAAMLSLAASPT 876 +VLE VCA+LG+ +GG+ GE GLRAMAAVLLRTLFD+RSDVWFRVQ TQ GVKA LL RLTKEPVAHIRRKLTHAIGQLAGISS T EWPELMALTVALCDA Q S EM++VGLDLVNILAEFCPGM+SPHQ GLLQMFGASL+D +IGVRVAALKAACSFLQDSL SAA A SLVP++MSV+E ATVN+GDE+AAGDVLEALNVIA+NQPLLLLG+ ++L+MV AML+LA SPT Sbjct: 47 QVLEQVCAVLGQADGGEVGE--GLRAMAAVLLRTLFDIRSDVWFRVQQETQAGVKATLLDRLTKEPVAHIRRKLTHAIGQLAGISSATGEWPELMALTVALCDAAQQSPEMKIVGLDLVNILAEFCPGMMSPHQDGLLQMFGASLEDPTIGVRVAALKAACSFLQDSL---SAAVAPSLVPRIMSVVE---------ATVNSGDEAAAGDVLEALNVIASNQPLLLLGESGDQTLEMVSTAMLTLAGSPT 282
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: D7FMD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD8_ECTSI) HSP 1 Score: 152 bits (384), Expect = 4.810e-43 Identity = 77/95 (81.05%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 1 MASAGLGAGVPQQLESLLAAFTNPDNEVRRRAEAAWEDLKLRLPDEVLENVCAILGREGGDAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQGRTQ 285 M SA + AG PQQLE LLAAFTN DNE R+RAE AWEDLK RLPDEVLEN+CAILGR+ +AGEAAGLRAMAAVLLRTLFD RSDVWFRVQ RTQ Sbjct: 1 MTSAAVSAGNPQQLEMLLAAFTNADNEARQRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAAGLRAMAAVLLRTLFDARSDVWFRVQERTQ 95
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: A0A835ZDS9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS9_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.530e-41 Identity = 99/210 (47.14%), Postives = 124/210 (59.05%), Query Frame = 1 Query: 37 QLESLLAAFTNPDNEVRRRAEAAWEDLKLRLPDEVLENVCAILGREGGDAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQGRTQIGVKAALLGRLTKEPVAHIRRKLTHAIGQLAGISSGTAE---------WPELMALTVALC---DAKQPSSEMRVVGLDLVNILAEFCPGMLSPHQAGLLQMFGASLDDG-SIGVRVAALKAACSFLQ 627 +LE LLAAF DNE RR AE W +K PD V E +C IL G G+RAM+AVLLRTLF +RSD W+R+Q RTQ V+ LL + +EPV HIR K+ HAIGQLA I+ G+ + WPEL+ L ALC DA+ + GL LV+ L E+ G+L+PH L +F A+L S VRVAAL+A S LQ Sbjct: 6 ELEGLLAAFMGLDNEARRAAEERWASIKKSAPDGVAEGLCMILSSTGETQPAYEGIRAMSAVLLRTLFGIRSDFWYRLQPRTQYAVREVLLRSVMEEPVRHIRLKVVHAIGQLASIAFGSRDGGGGGAAGGWPELLPLVTALCAHGDARHLEA-----GLMLVDKLCEYAHGLLAPHAPALTAIFAAALAHAESAPVRVAALRATASLLQ 210
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: A0A2D4CEF5_PYTIN (Importin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEF5_PYTIN) HSP 1 Score: 126 bits (317), Expect = 4.450e-29 Identity = 97/278 (34.89%), Postives = 147/278 (52.88%), Query Frame = 1 Query: 46 SLLAAFTNPDNEVRRRAEAAWEDLKLRLPDEVLENVCAILGR--EGGDAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQGRTQIGVKAALLGRLTKEPVAHIRRKLTHAIGQLAGIS-SGTAEWPELMALTVALCDAKQPSSEMRVVGLDLVNILAEFCPGMLSPHQAGLLQMFGASLDDGSIGVRVAALKAACSFLQDSLPGPSAAAASSLVPQMMSVLEASIYFHLWCATVNTGDESAAGDVLEALNVIAANQPLLLLGDPRSLDMVGAAMLSLAAS 870 +L+AA DN+ R++AE A+E LK +N A++G+ + A RA A VLLR L + +S V+ + TQ +KA LL L EPVAHIRRK+ H I ++A + + +WPE++A TVA A ++ +R LDLV L+ + P +++PH+ L +F SL+D S V++A+LKA+ SFL A + +V M+ +L+ + D++ DVL +L I P G SLD V AML +AA+ Sbjct: 6 ALIAALMANDNQTRKQAEEAYEQLKA-------QNAAALVGQLVQLLRAAPDVNARAFAPVLLRRLVEAQSGVYAALDAATQQALKAQLLEALAAEPVAHIRRKIGHVIAEVAAATLNAKQQWPEVLA-TVASLSANAETA-LRETALDLVGNLSSYAPELVAPHKESFLTLFTNSLNDASGEVQIASLKASSSFLLTLEKQQEVVAFAIIVGPMLRILQ---------VLMQNEDDTTLRDVLSSLVQITEVHPKFFRG---SLDDVARAMLCIAAA 262
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: D7FNE3_ECTSI (Similar to zinc finger CCCH-type containing 12C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE3_ECTSI) HSP 1 Score: 125 bits (315), Expect = 5.930e-29 Identity = 74/129 (57.36%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 415 MALTVALCDAKQPSSEMRVVGLDLVNILAEFCPGMLSPHQAGLLQMFGASLDDGSIGVRVAALKAACSFLQDSLPGPS-AAAASSLVPQMMSVLEASIYFHLWCATVNTGDESAAGDVLEALNVIAANQ 798 M + A CDA QPS E++VVGL LV+IL PGM+SPHQ GLLQMF SL+D IGVRVAALKAACS+LQ PGPS AAA+SSL P+MMSV+E A N+GD AA + EA++ I Q Sbjct: 1 MEMAAAFCDAAQPSPELKVVGLGLVSILTACYPGMMSPHQDGLLQMFAYSLEDADIGVRVAALKAACSYLQRLFPGPSGAAASSSLWPKMMSVVE---------AAANSGDPVAAQEAREAVDGITIEQ 120
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: A0A1V9YGF0_9STRA (Importin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGF0_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.550e-19 Identity = 86/279 (30.82%), Postives = 130/279 (46.59%), Query Frame = 1 Query: 49 LLAAFTNPDNEVRRRAEAAWEDLKLRLPDEVLENVCAILGREGGDAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQGRTQIGVKAALLGRLTKEPVAHIRRKLTHAIGQLAGISSGTAEWPELMALTVALCDAKQPSSEMRVVGLDLVNILAEFCPGMLSPHQAGLLQMFGASLDDGS---IGVRVAALKAACSFLQDSLPGPSAAAASSLVPQMMSVLEASIYFHLWCATVNTGDESAAGDVLEALNVIAANQPLLLLGDPRSLDMVGAAMLSLAASPT 876 L+ N DN VRR AEAA+ LK P ++ + ++ + RA A VLLR + + + R + KA LL L EP+AHIRRKL HAI +LA + A WPEL+ VAL A+ P + M++ LD++ L+E+ L H +F + + + +RVAA KA +++ + + L+ ++ V E + + DE +A +VL AL V++ P L LD + AML LA T Sbjct: 6 LILQLLNNDNNVRREAEAAYTRLKTEQPVQLTSTLLSLSCVQSNPTEPTT--RAFAPVLLRRVLETEGISHLEIAYRETL--KAQLLAALGAEPLAHIRRKLGHAIAELARLE---ASWPELLPAVVAL--AQHPDTAMQITSLDVLGTLSEYMGPTLRLHHDQFFNLFSTFIGRPASPRLDLRVAAAKAMVAYIVVLESAQAMQPFTQLLLPLLQVAE---------ELLQSSDELSAREVLSALLVLSEAHPAFL---QLHLDAICGAMLQLARQRT 263
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: A0A6H5JA30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA30_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 4.960e-19 Identity = 57/112 (50.89%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 463 MRVVGLDLVNILAEFCPGMLSPHQAGLLQMFGASLDDGSIGVRVAALKAACSFLQDSLPGPSAAAASSLVPQMMSVLEASIYFHLWCATVNTGDESAAGDVLEALNVIAANQ 798 M+VVGL LV+IL PGM+SPHQ GLLQMF S + IGVRVAALKAACS+LQ +PG A A++SL P+M SV+E A ++GD AA + E ++ I Q Sbjct: 1 MKVVGLGLVSILTACYPGMISPHQDGLLQMFAYSHEGADIGVRVAALKAACSYLQRLIPG--AVASASLWPKMTSVVE---------AAADSGDPVAAQEAREVVDGITIEQ 101
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: A0A8H7PYD4_MORIS (Importin N-terminal domain-containing protein n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7PYD4_MORIS) HSP 1 Score: 92.0 bits (227), Expect = 4.230e-17 Identity = 91/269 (33.83%), Postives = 129/269 (47.96%), Query Frame = 1 Query: 37 QLESLLAAFTNPDNEVRRRAEAAWEDLKL-RLPDEVLENVCAILGREGGDAGEAAGLRAMAAVLLR--------TLFDVRSDVWFRVQGRTQIGVKAALLGRLTKEPVAHIRRKLTHAIGQLAGISSGTAE-WPELMALTVALCDAKQPSSEMRVVGLDLVNILAEFCPGMLSP-HQAGLLQMFGASL-DDGSIGVRVAALKAACSFLQDSLPGPSAAAASSLVPQMMSVLEASIYFHLWCATVNTGDESAAGDVLEALNVIAANQPLL 807 QL +LL + + DN+VR +AEA D + + PD +L + + G D +RA ++VLLR T D + +W VQ T+ VK+ALL L+KE R KL I ++A E W +LMA ++ PS+E+R L + + P ++S H L +F ASL D S VR+AALKAA S++ + P PS A SL+P M+ VL T DE A D + L +A N P L Sbjct: 13 QLSTLLVSLPSADNDVRTQAEAQLNDQWIAQQPDVLLLGLAQLASASGEDH-----VRAFSSVLLRRIAFKSIATAEDPDAQLWSLVQENTRQAVKSALLVSLSKETNESTRHKLCDTISEIAKTDLLKGEKWSQLMAALFEC--SRSPSAELREASLRIFTAV----PDLISDQHNDALKGVFSASLADPESQNVRIAALKAAVSYILQADP-PSQKALGSLMPHMLEVLT---------PLAATPDEDALTDSIMTLIDLAENCPRL 260
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Match: A0A7S0LYU6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LYU6_9CRYP) HSP 1 Score: 86.7 bits (213), Expect = 1.180e-15 Identity = 78/258 (30.23%), Postives = 128/258 (49.61%), Query Frame = 1 Query: 37 QLESLLAAFTNPDNEVRRRAEAAWEDLKLRLPDEVLENVCAILGREGGDAGEAAGLRAMAAVLLRTLFDVRSDVWFRVQGRTQIGVKAALLGRLTKEPVAHIRRKLTHAIGQLAGISSGTAEWPELMALTVALCDAKQPSSEMRVVGLDLVNILAEFCPGMLSPHQAGLLQMFGASLDDG-SIGVRVAALKAACSFLQDSLPGPSAAAASSLVPQM--MSVLEASIYFHLWCATVNTGDESAAGDVLEALNVIAANQP 801 Q + L+ + T+ N++R+ AEA++E L P+ L +CA + + E +RAM AV+ R V D + ++ +Q VK+ L+ + +E V +RRK+ G++A + G +EWPE++ + L K +EMR + +++ L L P A L +F +L D S VR+AAL AA S +Q A S+L Q+ + VL ++ F + +N DE +A LE L +A P Sbjct: 35 QFDELIRSLTSSSNDIRKAAEASFEQL-CATPENALPLLCASMTQS-----EDETVRAMTAVMFRKR--VGEDFFSKLSPESQSAVKSTLINAVQQERVQSVRRKIADTAGEVAAMILGKSEWPEMLNFLLQL--GKSEFAEMRESSMLILSRLTFAVSDKLLPMVATLAGLFQGTLQDQQSKEVRLAALTAASSLIQ---------ALSNLEDQLQHLQVLIPAM-FGVVGGALNEQDEESARSALEDLISVAEEAP 272 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7715.16660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7715.16660.1 >prot_L-elsbetiae_contig7715.16660.1 ID=prot_L-elsbetiae_contig7715.16660.1|Name=mRNA_L-elsbetiae_contig7715.16660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=292bp MASAGLGAGVPQQLESLLAAFTNPDNEVRRRAEAAWEDLKLRLPDEVLENback to top mRNA from alignment at L-elsbetiae_contig7715:570..9354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7715.16660.1 ID=mRNA_L-elsbetiae_contig7715.16660.1|Name=mRNA_L-elsbetiae_contig7715.16660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8785bp|location=Sequence derived from alignment at L-elsbetiae_contig7715:570..9354+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7715:570..9354+ >mRNA_L-elsbetiae_contig7715.16660.1 ID=mRNA_L-elsbetiae_contig7715.16660.1|Name=mRNA_L-elsbetiae_contig7715.16660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1752bp|location=Sequence derived from alignment at L-elsbetiae_contig7715:570..9354+ (Laminarionema elsbetiae ELsaHSoW15)back to top |