mRNA_L-elsbetiae_contig771.16647.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: D1J798_ECTSI (Cytochrome b6 n=62 Tax=Stramenopiles TaxID=33634 RepID=D1J798_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 1.260e-152 Identity = 204/215 (94.88%), Postives = 212/215 (98.60%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 M K+YDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPS+SEAFSS+EYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGV LAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVP+IGPPIV+LLRGGVSVGQ+TLTRFYSAHTF+LPLVAA LM+THFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: CYB6_THAPS (Cytochrome b6 n=103 Tax=cellular organisms TaxID=131567 RepID=CYB6_THAPS) HSP 1 Score: 411 bits (1056), Expect = 7.540e-145 Identity = 192/215 (89.30%), Postives = 207/215 (96.28%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 M K+YDWFEERLE+Q+IADDI+SKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSV +AF+S+EYIMT VNFGWLIRSIHRWSASMMV+ML+LHVFRVYLTGGFKKPRELTWVTGVILAV TVSFGVTGYSLPWDQVGFWACKIVTGVP AVPI+GPP+V +LRGG SVGQ+TLTRFYSAHTF+LPL AAVLM+THFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEVQAIADDISSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVVDAFASVEYIMTSVNFGWLIRSIHRWSASMMVMMLVLHVFRVYLTGGFKKPRELTWVTGVILAVVTVSFGVTGYSLPWDQVGFWACKIVTGVPAAVPIVGPPLVLVLRGGESVGQSTLTRFYSAHTFVLPLAAAVLMLTHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: J9QUX6_9STRA (Cytochrome b6 n=2 Tax=Pelagomonadales TaxID=54409 RepID=J9QUX6_9STRA) HSP 1 Score: 410 bits (1053), Expect = 2.160e-144 Identity = 190/215 (88.37%), Postives = 208/215 (96.74%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 MSK+YDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRP+VS+AF+S+EYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGV+L T SFGVTGYSLPWDQVGFWACKIVTGVP+++P++GP +V +LRGGVSVGQ+TLTRFYSAHTF+LP+VAA LM+THFLMIR+QGISGPL Sbjct: 1 MSKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPTVSDAFASVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVLLGAVTASFGVTGYSLPWDQVGFWACKIVTGVPDSIPVVGPLLVGVLRGGVSVGQSTLTRFYSAHTFVLPVVAAALMLTHFLMIRQQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: A0A0D3M5L9_9STRA (Cytochrome b6 n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A0D3M5L9_9STRA) HSP 1 Score: 407 bits (1045), Expect = 3.580e-143 Identity = 187/215 (86.98%), Postives = 207/215 (96.28%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 M K+YDWFEERLEIQ+IADDITSKYVPPHVNIFYCFGGI TCFL+QVATGFAMTFYYRP+V++AF+S+EY+MTE NFGWLIRSIHRWSASMMVLM+ILHVFRVYLTGGFK+PRELTWVTGV+L+V TVSFGVTGYSLPWDQVG+WACKIVTGVPEA+P+IG P+VELLRGGVSVGQ TLTRFYS HTF+LPL+AAVLM+THFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCFGGITLTCFLIQVATGFAMTFYYRPTVTDAFASVEYLMTEANFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKRPRELTWVTGVLLSVITVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVIGSPLVELLRGGVSVGQATLTRFYSLHTFVLPLLAAVLMLTHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: A0A516ZA38_9STRA (Cytochrome b6 n=4 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZA38_9STRA) HSP 1 Score: 404 bits (1038), Expect = 6.210e-142 Identity = 187/215 (86.98%), Postives = 206/215 (95.81%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 MSK+YDWFEERLE+Q+IADDITSKYVPPHVNIFYCFGGIV TCFLVQVATGFAMT YYRP+V EAF+S+EYIMT+VNFGWLIRSIHRWSASMMV+M++LHVFRVYLTGGFKKPRELTW+TGVILAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEAVP++G ++ LLRGGVSVGQ+TLTRFYSAHTFILP+ A VLM+THFLMIRKQGISGPL Sbjct: 12 MSKVYDWFEERLEVQAIADDITSKYVPPHVNIFYCFGGIVLTCFLVQVATGFAMTVYYRPTVVEAFASVEYIMTQVNFGWLIRSIHRWSASMMVMMMVLHVFRVYLTGGFKKPRELTWITGVILAVVTVSFGVTGYSLPWDQVGYWACKIVTGVPEAVPVVGTTVLYLLRGGVSVGQSTLTRFYSAHTFILPVAAVVLMLTHFLMIRKQGISGPL 226
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: CYB6_GUITH (Cytochrome b6 n=13 Tax=Eukaryota TaxID=2759 RepID=CYB6_GUITH) HSP 1 Score: 401 bits (1030), Expect = 6.940e-141 Identity = 185/215 (86.05%), Postives = 204/215 (94.88%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 M K+YDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI FTCF++QVATGFAMTFYYRP+V+EAF+S+EYIMTEVN+GWL RS+HRWSASMMVLM+ILHVFRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEA+P++G +VELLRG VSVGQ TLTRFYSAHTF+LP+ AAVLM+THFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGITFTCFIIQVATGFAMTFYYRPTVAEAFASVEYIMTEVNYGWLFRSMHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVTLAVVTVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVVGSLLVELLRGSVSVGQATLTRFYSAHTFVLPVAAAVLMLTHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: A0A170TME3_9CHLO (Cytochrome b6 n=2 Tax=Palmophyllaceae TaxID=2201466 RepID=A0A170TME3_9CHLO) HSP 1 Score: 398 bits (1022), Expect = 1.150e-139 Identity = 186/215 (86.51%), Postives = 202/215 (93.95%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 MSK+Y+WF+ERLEIQ+IADDITSKYVPPHVNIFYCFGGIV TCFLVQVATGFAMTFYYRP+V++AF S+ Y+MT VNFGWLIRSIHRWSASMMVL +ILH+FRVYLTGGFKKPRELTWVTGVILAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEAVP IGP +VELLRG VSVGQ TLTRFYSAHTF+LPL+ AV M+ HFLMIRKQGISGPL Sbjct: 1 MSKVYNWFDERLEIQAIADDITSKYVPPHVNIFYCFGGIVLTCFLVQVATGFAMTFYYRPTVTDAFESVSYLMTSVNFGWLIRSIHRWSASMMVLTMILHIFRVYLTGGFKKPRELTWVTGVILAVCTVSFGVTGYSLPWDQVGYWACKIVTGVPEAVPFIGPIVVELLRGSVSVGQATLTRFYSAHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: CYB6_GRATL (Cytochrome b6 n=171 Tax=Eukaryota TaxID=2759 RepID=CYB6_GRATL) HSP 1 Score: 397 bits (1021), Expect = 1.630e-139 Identity = 186/215 (86.51%), Postives = 204/215 (94.88%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 M K+YDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGIVFT FL+QVA+GFAMTFYYRP+V+EAFSS+EYIMT+VNFGWLIRSIHRWSASMMVLMLILH+FRVYLTGGFKKPRELTWVTGVILAV TVSFGVTGYSLPWDQ+G+WA KIVTGVPEA+P++G IVELLRGGVSVGQ+TLTRFYS HTF+LPL+ AV M+ HFLMIRKQGISGPL Sbjct: 1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGIVFTSFLIQVASGFAMTFYYRPTVAEAFSSVEYIMTDVNFGWLIRSIHRWSASMMVLMLILHMFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVVGGSIVELLRGGVSVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: M5DCT3_CHOCR (Cytochrome b6 n=28 Tax=Eukaryota TaxID=2759 RepID=M5DCT3_CHOCR) HSP 1 Score: 395 bits (1014), Expect = 1.910e-138 Identity = 185/215 (86.05%), Postives = 204/215 (94.88%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 MSK+YDWFEERLEIQ+IA+DITSKYVPPHVNIFYC GGIVFT FL+QVA+GFAMTFYYRP+V+EAFSS+EYIMT+VNFGWLIRSIHRWSASMMVLMLILH+FRVYLTGGFKKPRELTWVTGVILAV TVSFGVTGYSLPWDQ+G+WA KIVTGVPEA+P++G IVELLRG VSVGQ+TLTRFYS HTF+LPL+ AV M+ HFLMIRKQGISGPL Sbjct: 1 MSKVYDWFEERLEIQAIANDITSKYVPPHVNIFYCLGGIVFTSFLIQVASGFAMTFYYRPTVTEAFSSVEYIMTDVNFGWLIRSIHRWSASMMVLMLILHMFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVVGGSIVELLRGSVSVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Match: CYB6_EMIHU (Cytochrome b6 n=10 Tax=cellular organisms TaxID=131567 RepID=CYB6_EMIHU) HSP 1 Score: 395 bits (1014), Expect = 1.910e-138 Identity = 183/215 (85.12%), Postives = 205/215 (95.35%), Query Frame = 1 Query: 1 MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVSEAFSSIEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVILAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPIIGPPIVELLRGGVSVGQNTLTRFYSAHTFILPLVAAVLMVTHFLMIRKQGISGPL 645 MS +YDWF+ERLEIQ+IADDITSKYVPPHVNIFYC GGI TCF+VQVATGFAMTFYYRP+V+EAF+S+EY+MTEVNFGWLIRS+HRWSASMMVL +ILHV RVYLTGGFKKPRELTWVTGV+LA TVSFGVTGYSLPWDQVG+WACKIVTGVP+AVPI+G IV++LRGGVSVGQ+TLTRFYSAHTF+LP+VAAVLM+THF+MIRKQGISGPL Sbjct: 1 MSSVYDWFQERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFIVQVATGFAMTFYYRPTVTEAFASVEYLMTEVNFGWLIRSVHRWSASMMVLNMILHVCRVYLTGGFKKPRELTWVTGVLLASVTVSFGVTGYSLPWDQVGYWACKIVTGVPDAVPIVGGLIVQVLRGGVSVGQSTLTRFYSAHTFVLPVVAAVLMLTHFVMIRKQGISGPL 215 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig771.16647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig771.16647.1 >prot_L-elsbetiae_contig771.16647.1 ID=prot_L-elsbetiae_contig771.16647.1|Name=mRNA_L-elsbetiae_contig771.16647.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=216bp MSKIYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATback to top mRNA from alignment at L-elsbetiae_contig771:6605..7252+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig771.16647.1 ID=mRNA_L-elsbetiae_contig771.16647.1|Name=mRNA_L-elsbetiae_contig771.16647.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=648bp|location=Sequence derived from alignment at L-elsbetiae_contig771:6605..7252+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig771:6605..7252+ >mRNA_L-elsbetiae_contig771.16647.1 ID=mRNA_L-elsbetiae_contig771.16647.1|Name=mRNA_L-elsbetiae_contig771.16647.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1296bp|location=Sequence derived from alignment at L-elsbetiae_contig771:6605..7252+ (Laminarionema elsbetiae ELsaHSoW15)back to top |