mRNA_L-elsbetiae_contig771.16645.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig771.16645.1
Unique NamemRNA_L-elsbetiae_contig771.16645.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A5N6NM02_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NM02_9ASTR)

HSP 1 Score: 358 bits (920), Expect = 5.010e-120
Identity = 214/332 (64.46%), Postives = 239/332 (71.99%), Query Frame = 1 
Query:    1 IPIKEVIQPHVPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTSSHGVTGG-----LRSLRDLTQHLTTRAD--------DSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQSFPIVIPLLKVNSHVLLTRPPLKF*KTFVRLACVRHTASVHPEPGSNS 957
            +P KEVIQPH+PVRLPCYDFT VTS   G  LL +KV  TTSG  SSH VTGG     +R+     +    R           +HAPPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    SIHRL+LGLLGYLIPFAPLAFV+QC   PS+V SPLV   ISTHFTAP +IP   T L+ +  LRP+IPDN CIL ITAAAGTELADAYS   V  SS  KEV++P AF LHA LL QAFAHC KFPTAASRRSL RVSVPVWLIILS+QLLI+AL  FP V+PL +  S+ LLTRPPL+     VRLACV+H ASVHPEPGSNS
Sbjct:   46 LPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKV--TTSGMASSHSVTGGELQPAIRTEDGFLELAHPRGIATLCPGHCSTHAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVAQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLDA-LRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALP-FPAVVPLPRAGSYALLTRPPLET-PLPVRLACVKHAASVHPEPGSNS 372
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A5N6PVU4_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PVU4_9ASTR)

HSP 1 Score: 360 bits (923), Expect = 7.040e-118
Identity = 215/332 (64.76%), Postives = 239/332 (71.99%), Query Frame = 1 
Query:    1 IPIKEVIQPHVPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTSSHGVTGG-----LRSLRDLTQHLTTRAD--------DSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQSFPIVIPLLKVNSHVLLTRPPLKF*KTFVRLACVRHTASVHPEPGSNS 957
            +P KEVIQPH+PVRLPCYDFT VTS   G  LL +KV  TTSG  SSH VTGG     +R+     +    R           +HAPPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    SIHRL+LGLLGYLIPFAPLAFVSQC   PS+V SPLV   ISTHFTAP +IP   T L+ +  LRP+IPDN CIL ITAAAGTELADAYS   V  SS  KEV++P AF LHA LL QAFAHC KFPTAASRRSL RVSVPVWLIILS+QLLI+AL  FP V+PL +  S+ LLTRPPL+     VRLACV+H ASVHPEPGSNS
Sbjct:  237 LPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKV--TTSGMASSHSVTGGELQPAIRTEDGFLELAHPRGIATLCPGHCSTHAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLDA-LRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALP-FPAVVPLPRAGSYALLTRPPLET-PLPVRLACVKHAASVHPEPGSNS 563
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A2N9HN32_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HN32_FAGSY)

HSP 1 Score: 350 bits (899), Expect = 2.490e-115
Identity = 208/319 (65.20%), Postives = 228/319 (71.47%), Query Frame = 1 
Query:    1 IPIKEVIQPHVPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTSSHGVTGGLRSLRDLTQHLTTRADDSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQSFPIVIPLLKVNSHVLLTRPPLKF*KTFVRLACVRHTASVHPEPGSNS 957
            +P KEVIQPH+PVRLPCYDFT VTS   G  LL +KV  TTSG  SSH VTGGLRSLRDLTQHLT RADDSHAPPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    SIHRL+LGLLGYLIPFAPLAFVSQC   PS+V SPLV   ISTHFTAP +IP   T L+ +  LRP+IPDN CIL ITAAAGTELADAYS   V  SS  KEV++P                           SL RVSVPVWLIILS+QLLI+AL  FP V+PL +  S+ LLTRPPL+     VRLACV+H ASVHPEPGSNS
Sbjct:  195 LPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLVVKV--TTSGMASSHSVTGGLRSLRDLTQHLTARADDSHAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLDA-LRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDP---------------------------SLGRVSVPVWLIILSDQLLIIALP-FPAVVPLPRAGSYALLTRPPLET-PLPVRLACVKHAASVHPEPGSNS 481
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A2N9HSC7_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HSC7_FAGSY)

HSP 1 Score: 350 bits (899), Expect = 1.100e-114
Identity = 208/319 (65.20%), Postives = 228/319 (71.47%), Query Frame = 1 
Query:    1 IPIKEVIQPHVPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTSSHGVTGGLRSLRDLTQHLTTRADDSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQSFPIVIPLLKVNSHVLLTRPPLKF*KTFVRLACVRHTASVHPEPGSNS 957
            +P KEVIQPH+PVRLPCYDFT VTS   G  LL +KV  TTSG  SSH VTGGLRSLRDLTQHLT RADDSHAPPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    SIHRL+LGLLGYLIPFAPLAFVSQC   PS+V SPLV   ISTHFTAP +IP   T L+ +  LRP+IPDN CIL ITAAAGTELADAYS   V  SS  KEV++P                           SL RVSVPVWLIILS+QLLI+AL  FP V+PL +  S+ LLTRPPL+     VRLACV+H ASVHPEPGSNS
Sbjct:  244 LPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLVVKV--TTSGMASSHSVTGGLRSLRDLTQHLTARADDSHAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLDA-LRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDP---------------------------SLGRVSVPVWLIILSDQLLIIALP-FPAVVPLPRAGSYALLTRPPLET-PLPVRLACVKHAASVHPEPGSNS 530
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A162A9Q8_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162A9Q8_DAUCS)

HSP 1 Score: 335 bits (859), Expect = 1.510e-111
Identity = 191/266 (71.80%), Postives = 208/266 (78.20%), Query Frame = 1 
Query:  160 LRSLRDLTQHLTTRADDSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQSFPIVIPLLKVNSHVLLTRPPLKF*KTFVRLACVRHTASVHPEPGSNS 957
            LRSLRDLTQHLT RADDS APPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    SIHRL+LGLLGYLIPFA LAFVSQC   PS+V SPLV   ISTHFTAP +IP   T L+ +  LRP+IPDN CIL ITAAAGTELADAYS   V  SS  KEV++P AF LHA LL QAFAHC KFPTAASRRSL RVSVPVWLIILS+QLLI+AL  FP V+PL +  S+ LLTRPPL+     VRLACV+H ASVHPEPGSNS
Sbjct:   57 LRSLRDLTQHLTARADDSIAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFATLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLDA-LRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALP-FPAVVPLPRAGSYALLTRPPLET-PLPVRLACVKHAASVHPEPGSNS 319
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A2N9HF66_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HF66_FAGSY)

HSP 1 Score: 350 bits (899), Expect = 3.710e-110
Identity = 208/319 (65.20%), Postives = 228/319 (71.47%), Query Frame = 1 
Query:    1 IPIKEVIQPHVPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTSSHGVTGGLRSLRDLTQHLTTRADDSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQSFPIVIPLLKVNSHVLLTRPPLKF*KTFVRLACVRHTASVHPEPGSNS 957
            +P KEVIQPH+PVRLPCYDFT VTS   G  LL +KV  TTSG  SSH VTGGLRSLRDLTQHLT RADDSHAPPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    SIHRL+LGLLGYLIPFAPLAFVSQC   PS+V SPLV   ISTHFTAP +IP   T L+ +  LRP+IPDN CIL ITAAAGTELADAYS   V  SS  KEV++P                           SL RVSVPVWLIILS+QLLI+AL  FP V+PL +  S+ LLTRPPL+     VRLACV+H ASVHPEPGSNS
Sbjct:  665 LPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLVVKV--TTSGMASSHSVTGGLRSLRDLTQHLTARADDSHAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLDA-LRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDP---------------------------SLGRVSVPVWLIILSDQLLIIALP-FPAVVPLPRAGSYALLTRPPLET-PLPVRLACVKHAASVHPEPGSNS 951
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A4D6NF64_VIGUN (Ribosomal protein S7 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6NF64_VIGUN)

HSP 1 Score: 326 bits (836), Expect = 4.440e-105
Identity = 188/283 (66.43%), Postives = 207/283 (73.14%), Query Frame = 1 
Query:    1 IPIKEVIQPHVPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTSSHGVTGG-----------LRSLRDLTQHLTTRADDSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQS 816
            +P KEVIQPH+PVRLPCY+FTLVTS   G  LL +KV  TT G  SSH VTGG           LRSLRDLTQHLT RADDSHAPPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    +IH L+LGLLGYLIPFAPLAFVSQC   P+KV SPLV   ISTH TAP +IP     L+ +  LR +IPDN CIL +TAAAG+ELADAYS   V  SS  KEV++P AF LHA LL QAFAHC KF T AS RSL RVSVPVWLIILS+QLLI+AL  
Sbjct:    5 LPEKEVIQPHLPVRLPCYEFTLVTSLAFGIPLLVVKV--TTLGMASSHSVTGGVYKDRERINRWLRSLRDLTQHLTARADDSHAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPNIHCLRLGLLGYLIPFAPLAFVSQCQCRPNKVLSPLVFFLISTHLTAPPEIPSAPIVLQLDA-LRQIIPDNACILCLTAAAGSELADAYSPDTVIASSPRKEVHDPYAFYLHATLLRQAFAHCGKFSTVASHRSLGRVSVPVWLIILSDQLLIIALSG 284
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A2P5W7G6_GOSBA (Uncharacterized protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5W7G6_GOSBA)

HSP 1 Score: 300 bits (768), Expect = 2.300e-96
Identity = 184/307 (59.93%), Postives = 202/307 (65.80%), Query Frame = 1 
Query:    1 IPIKEVIQPHVPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTSSHGVTGGLRSLR--------------------------------DLTQH-----LTTRADDSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVAL 810
            +P KEVIQPH+PVRLPCYDFT VTS   G  LL +KV  TTSG  SSH VTGG+   R                                DLT       L+      HAPPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    SIHRL+LGLLGYLIPFAPLAFVSQC   PS+V SPLV   ISTHFTAP +IP   T L+ +  LRP+IPDN CIL IT AAGTELADAYS   V  SS  KEV++P AF L+A LL QAFAHC KFP AASRRSL RVSVPVWLIILS+QLLI+AL
Sbjct:   18 LPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVKV--TTSGMASSHSVTGGVYKARERIHRRMADRRLLAIPASCRRHVCRPGHKGHDDLTSSSPSSGLSPAVCSGHAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLDA-LRPIIPDNACILCITTAAGTELADAYSPDTVIASSPGKEVHDPLAFYLYAALLRQAFAHCGKFPIAASRRSLGRVSVPVWLIILSDQLLIIAL 321
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A166GEK7_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166GEK7_DAUCS)

HSP 1 Score: 276 bits (705), Expect = 3.000e-88
Identity = 172/298 (57.72%), Postives = 193/298 (64.77%), Query Frame = 1 
Query:    1 IPIKEVIQPHVPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTSSHGVTGGLRSLRDLTQHLTTRADDSHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSIS----THFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQSFPIVIPLLKVNSHVLLTRPPLK 882
            +P KEVIQPH+PVRLPCYDFT VTS   G  LL +K                      DLTQHL  RA+DSHAPP+  FPKA   FK+I  MSNPGGILNALAT LHG I    SIHRL+LGLLGYLIPFA L F+SQ     +   SP  V++ S     H      +   L      +  +   PDN CIL ITAAAGTELADAYS   V  SS  KEV++P AF LHA LL QAFAHC KFPTAASRRSL RVSVPVWLIILS+QLLI+AL  FP V+PL +  S+ LLTRPPLK
Sbjct:   44 LPEKEVIQPHLPVRLPCYDFTPVTSPAFGIPLLAVK----------------------DLTQHLMARANDSHAPPLSAFPKAPLSFKRIRGMSNPGGILNALATTLHGLIRTAPSIHRLRLGLLGYLIPFATLDFISQY----TDAYSPDTVIASSQGKEVHDPWAFYLHAALLRQAFAHCGKFPSPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALP-FPAVVPLPRAGSYALLTRPPLK 314
[Close]
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Match: A0A2N9H1D9_FAGSY (Uncharacterized protein n=10 Tax=Magnoliopsida TaxID=3398 RepID=A0A2N9H1D9_FAGSY)

HSP 1 Score: 278 bits (712), Expect = 6.290e-82
Identity = 189/358 (52.79%), Postives = 213/358 (59.50%), Query Frame = 1 
Query:   13 EVIQPH--VPVRLPCYDFTLVTSFTLGTFLLKIKVKITTSGTTS-SHGVTGGLRSLRDLTQ--------------------HLTTRADD--------------------SHAPPVYVFPKALFFFKKIYIMSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*KWPSKVPSPLVVLSISTHFTAPLKIPFTLTTLKSNNPLRPVIPDNTCILRITAAAGTELADAYSSSNVRTSSLIKEVYNPKAFILHAILLCQAFAHCRKFPTAASRRSLDRVSVPVWLIILSNQLLIVALQSFPIVIPLLKVNSHVLLTRPPLKF*KTFVRLACVRHTASVHPEPGSNS 957
            E+I P    PVRLPCYDFT VTS   G  LL +KV  TTSG    SH VTGG+   R+                        L +R +D                    +HAPPV  FPKA   FK+I  MS+PGGILNALAT LHGSI    SIHRL+LGLLGYLIPFAPLAFVSQC   PS+V SPLV   ISTHFTAP +IP   T L+ +  LRP+IPDN CIL ITAAAGTELADAYS   V  SS  KEV++P                           SL RVSVPVWLIILS+QLLI+AL  FP V+PL +  S+ LLTRPPL+     VRLACV+H ASVHPEPGSNS
Sbjct:  843 ELIAPSRTFPVRLPCYDFTPVTSPAFGIPLLVVKV--TTSGHGQLSHSVTGGVYKARETNSPPYMADRRLLAIPGFMQASCSLQSRTEDGFLGLAHPRGIATLCPGHCSTHAPPVSAFPKAPLSFKRIRGMSSPGGILNALATALHGSIRTAPSIHRLRLGLLGYLIPFAPLAFVSQCQCRPSRVLSPLVFFPISTHFTAPPEIPSAPTVLQLDA-LRPIIPDNACILCITAAAGTELADAYSPDTVIASSPGKEVHDP---------------------------SLGRVSVPVWLIILSDQLLIIALP-FPAVVPLPRAGSYALLTRPPLET-PLPVRLACVKHAASVHPEPGSNS 1168
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig771.16645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N6NM02_9ASTR5.010e-12064.46Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A5N6PVU4_9ASTR7.040e-11864.76Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A2N9HN32_FAGSY2.490e-11565.20Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9HSC7_FAGSY1.100e-11465.20Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A162A9Q8_DAUCS1.510e-11171.80Uncharacterized protein n=2 Tax=Daucus carota subs... [more]
A0A2N9HF66_FAGSY3.710e-11065.20Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A4D6NF64_VIGUN4.440e-10566.43Ribosomal protein S7 n=1 Tax=Vigna unguiculata Tax... [more]
A0A2P5W7G6_GOSBA2.300e-9659.93Uncharacterized protein n=1 Tax=Gossypium barbaden... [more]
A0A166GEK7_DAUCS3.000e-8857.72Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A2N9H1D9_FAGSY6.290e-8252.79Uncharacterized protein n=10 Tax=Magnoliopsida Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig771contigL-elsbetiae_contig771:2886..4382 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score85.1
Seed ortholog evalue9.8e-15
Seed eggNOG ortholog4113.PGSC0003DMT400048624
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG OGs2E4EA@1,2S5QZ@2759,389WA@33090,3GYYM@35493,44TE1@71274
Best tax levelasterids
Best eggNOG OGNA|NA|NA
Exons5
Model size957
Cds size147
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816856.095659-UTR-L-elsbetiae_contig771:2885..30421622816856.095659-UTR-L-elsbetiae_contig771:2885..3042Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 2886..3042 +
1691683864.8541346-UTR-L-elsbetiae_contig771:2885..30421691683864.8541346-UTR-L-elsbetiae_contig771:2885..3042Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 2886..3042 +
1622816856.1058292-UTR-L-elsbetiae_contig771:3321..34371622816856.1058292-UTR-L-elsbetiae_contig771:3321..3437Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 3322..3437 +
1691683864.8754735-UTR-L-elsbetiae_contig771:3321..34371691683864.8754735-UTR-L-elsbetiae_contig771:3321..3437Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 3322..3437 +
1622816856.1359687-UTR-L-elsbetiae_contig771:3686..37921622816856.1359687-UTR-L-elsbetiae_contig771:3686..3792Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 3687..3792 +
1691683864.914003-UTR-L-elsbetiae_contig771:3686..37921691683864.914003-UTR-L-elsbetiae_contig771:3686..3792Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 3687..3792 +
1622816856.148178-UTR-L-elsbetiae_contig771:3857..41411622816856.148178-UTR-L-elsbetiae_contig771:3857..4141Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 3858..4141 +
1691683864.9263127-UTR-L-elsbetiae_contig771:3857..41411691683864.9263127-UTR-L-elsbetiae_contig771:3857..4141Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 3858..4141 +
1622816856.1595664-UTR-L-elsbetiae_contig771:4235..43821622816856.1595664-UTR-L-elsbetiae_contig771:4235..4382Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 4236..4382 +
1691683864.9363983-UTR-L-elsbetiae_contig771:4235..43821691683864.9363983-UTR-L-elsbetiae_contig771:4235..4382Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig771 4236..4382 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816856.1159463-CDS-L-elsbetiae_contig771:3437..34501622816856.1159463-CDS-L-elsbetiae_contig771:3437..3450Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig771 3438..3450 +
1691683864.8902042-CDS-L-elsbetiae_contig771:3437..34501691683864.8902042-CDS-L-elsbetiae_contig771:3437..3450Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig771 3438..3450 +
1622816856.1257207-CDS-L-elsbetiae_contig771:3552..36861622816856.1257207-CDS-L-elsbetiae_contig771:3552..3686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig771 3553..3686 +
1691683864.9051366-CDS-L-elsbetiae_contig771:3552..36861691683864.9051366-CDS-L-elsbetiae_contig771:3552..3686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig771 3553..3686 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig771.16645.1prot_L-elsbetiae_contig771.16645.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig771 3438..3686 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig771.16645.1

>prot_L-elsbetiae_contig771.16645.1 ID=prot_L-elsbetiae_contig771.16645.1|Name=mRNA_L-elsbetiae_contig771.16645.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=49bp
MSNPGGILNALATILHGSIHATSSIHRLQLGLLGYLIPFAPLAFVSQC*
back to top

mRNA from alignment at L-elsbetiae_contig771:2886..4382+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig771.16645.1 ID=mRNA_L-elsbetiae_contig771.16645.1|Name=mRNA_L-elsbetiae_contig771.16645.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1497bp|location=Sequence derived from alignment at L-elsbetiae_contig771:2886..4382+ (Laminarionema elsbetiae ELsaHSoW15)
ATTCCAATTAAGGAGGTGATCCAGCCACACGTTCCCGTACGGCTACCTTG
TTACGACTTCACCTTAGTCACTAGCTTTACCTTAGGCACCTTTCTCCTTA
AAATTAAGGTTAAAATAACGACTTCGGGTACAACCAGCTCCCATGGTGTG
ACGGGCGGTGTGTACAAGACCCGAGAACGGATTCACCGCTGTATAGCTGA
CCAGCGATTACTAGCGATTCCATCTTCATGAAGGCGAGTTGCAGCCTTCA
ATCCGAACTTAGAACAAGTTTTTAAGATTAGCTCATTTTCACAAATTTGC
AACTTTTTGTCTTGTCCAATGTAGCACGTGTGTAGCCCAGGATGTAAGGG
GCATGATGACTTGACGTCATCCTCACCTTCCTCCGGTTTATAACCGGCAG
TCTTTCAAAATAACTATTAAAGCAATAAGAAACAAGGGTTGCGCTCGTTG
CGGGACTTAACCCAACATCTCACGACACGAGCTGACGACAGCCATGCACC
ACCTGTTTATGTATTCCCTAAGGCACTTTTTTTTTTCAAAAAAATTTACA
TAATGTCAAATCCTGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACA
TGCTCCACCGCTTGTGCGGGTCCCCGTCAATTCCTTTGAGTTTCACTCTT
GCGAGTATAATTCCCAGGCGGGATACTTAATGCGTTAGCTACGATACTGC
ATGGATCGATACACGCAACATCTAGTATCCATCGTTTACAGCTAGGACTA
CTGGGGTATCTAATCCCATTTGCTCCCCTAGCTTTCGTCTCTCAGTGTTA
GAAATGGCCTAGTAAAGTGCCTTCGCCTTTGGTGGTCCTTTCAATATCAA
CGCATTTCACCGCTCCACTGAAAATTCCCTTTACCCTTACCACCCTCAAG
TCTAATAGTTTCTATTACAGATTTAAAGTTAAGCTTTAAGTTTTAATAAT
AGACTTACTAAACAACCTACAGACCCTTTACGCCCAGTTATTCCGGATAA
CACTTGCATCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATG
CTTATTCATCAAGTAACGTCAGAACTTCTTCCTTGATAAAAGAAGTTTAC
AACCCGAAGGCCTTCATCCTTCACGCGATATTGCTCTGTCAGGCTTTTGC
CCATTGCAGAAAATTCCCCACTGCTGCCTCCCGTAGAAGTCTGGACCGTG
TCTCAGTTCCAGTGTGGCTGATCATCCTCTCAAACCAACTACTGATCGTC
GCCTTGGTAAGCTTTTACCTTACCAACTAGCTAATCAGACGCAAGCTTTT
CTATTAGGCGGATTTCTCCTTTTATTTTAAATAATAATATGCGGCATTAG
CAATCGTTTCCAATTGTTATTCCCCTCCTAAAGGTAAATTCTCACGTGTT
ACTCACCCGTCCGCCACTAAAGTTTTAAAAAACTTTCGTTCGACTTGCAT
GTGTTAGGCATACCGCCAGCGTTCATCCTGAGCCAGGATCAAACTCT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig771:2886..4382+

>mRNA_L-elsbetiae_contig771.16645.1 ID=mRNA_L-elsbetiae_contig771.16645.1|Name=mRNA_L-elsbetiae_contig771.16645.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=294bp|location=Sequence derived from alignment at L-elsbetiae_contig771:2886..4382+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCAAATCCTGATGTCAAATCCTGGCGGGATACTTAATGCGTTAGCTA
CGATACTGCATGGATCGATACACGCAACATCTAGTATCCATCGTTTACAG
CTAGGACTACTGGGGTATCTAATCCCATTTGCTCCCCTAGCTTTCGTCTC
TCAGTGTTAGGCGGGATACTTAATGCGTTAGCTACGATACTGCATGGATC
GATACACGCAACATCTAGTATCCATCGTTTACAGCTAGGACTACTGGGGT
ATCTAATCCCATTTGCTCCCCTAGCTTTCGTCTCTCAGTGTTAG
back to top