mRNA_L-elsbetiae_contig7703.16644.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: D8LFP6_ECTSI (Ef-hand domain (C-terminal) containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP6_ECTSI) HSP 1 Score: 550 bits (1418), Expect = 1.270e-195 Identity = 298/329 (90.58%), Postives = 309/329 (93.92%), Query Frame = 1 Query: 1 MSTRWATSMPALPLAASSSEFPMVPGIRRGHGPYVKASCGRMLQGERPGSSGMIRPSQSQPILRGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 987 MSTRWATSMPALPLA+ +S+FPMVPGIRRGHGPYVK MLQG RPGSSGMIR S+SQPILRGYG+GTRPGTAGSSVP T EGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSD+TISIEEPRITNSGL+QGKFMRRLQVTRPLN+CARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXX P RDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGR L P+E+YP+DGYGAERAKVS PKKRSMMPAREKGEFYKKDRKVLRFFCKYKD RLQGDKRDYILYYYLLNDTIEIKEV Sbjct: 1 MSTRWATSMPALPLASPTSDFPMVPGIRRGHGPYVK-----MLQGARPGSSGMIRSSKSQPILRGYGEGTRPGTAGSSVPARTREGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDSTISIEEPRITNSGLTQGKFMRRLQVTRPLNSCARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXT-TPPPRDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRSLKPTENYPEDGYGAERAKVSAPKKRSMMPAREKGEFYKKDRKVLRFFCKYKDCRLQGDKRDYILYYYLLNDTIEIKEV 323
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A6H5JPJ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ7_9PHAE) HSP 1 Score: 499 bits (1285), Expect = 8.010e-174 Identity = 295/423 (69.74%), Postives = 306/423 (72.34%), Query Frame = 1 Query: 1 MSTRWATSMPALPLAASSSEFPMVPGIRRGHGPYVKAS-----------CGR---------------------------------------------------------------MLQGERPGSSGMIRPSQSQPILRGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKK--------------------RSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 987 MSTRWATSMPALPLA+S+S+FPMVPGIRRGHGPYVKAS C R MLQG RPGSSGMIRPS+SQPILRGYG+ SSVP T EGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSD+TISIEEPRITNSGL+QGKFMRRLQVTRPLN+CARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXX P RDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGR L +E+YP+DGYGAERAKVS PKK RSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV Sbjct: 1 MSTRWATSMPALPLASSTSDFPMVPGIRRGHGPYVKASDVVERNGVAQWCQRRAHVHMIECTWPIFPLKAGLALLAWAAGGVNGMVGSSLFTFLGKPYHEGTRTPGALLGMAAPQMLQGTRPGSSGMIRPSKSQPILRGYGEXXXXXXXXSSVPARTREGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDSTISIEEPRITNSGLTQGKFMRRLQVTRPLNSCARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXAT-TPPPRDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRSLKAAENYPEDGYGAERAKVSAPKKSWEKIAHCPPAKFPNKLARFRSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 422
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A835Z5Q7_9STRA (Ef-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q7_9STRA) HSP 1 Score: 274 bits (700), Expect = 4.850e-87 Identity = 157/336 (46.73%), Postives = 194/336 (57.74%), Query Frame = 1 Query: 49 SSSEFPMVPGIRRGHGPYVKASCGRMLQGERPGSSGMIRPSQSQPILRGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSM-MPA----------------------REKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 987 S + PMVPGI R Y+K+ G+ L G +G + P + G RPGTA + H +P YITKE QVLRF AYFQEPV+EGGS+DA GFRVR F++ Y LSD T++IEEPR+ NSGL+QGKFM+R +V RP R GG +Y P DF VGEE+W++GRRFRIVDAD TR+W++ NLG P+ED PDDGY ER + VPK+ +P REKGE++KKDRKVLRFFC+Y+D RLQGDKRDY+LYYYLLNDT+E+KEV Sbjct: 7 SLPDLPMVPGIYRAPNGYLKSCTGQGLGGSGMSCAGSVAPRSTV--------GPRPGTALGTH--HGVNSKKVPSYITKEGQVLRFRAYFQEPVYEGGSVDAAGFRVRVFAVNYHLSDETMAIEEPRVQNSGLTQGKFMKRTKVERP--------RGVGGG----------------------------------VYQPADFCVGEEIWVYGRRFRIVDADARTREWYRENLGLEQGPAEDVPDDGYARERQRFEVPKQTEAGLPLGTGSGVAAGGAVTGGAAARAVRREKGEYFKKDRKVLRFFCRYEDQRLQGDKRDYVLYYYLLNDTVEVKEV 290
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A7S1UHB1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHB1_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.540e-31 Identity = 105/328 (32.01%), Postives = 153/328 (46.65%), Query Frame = 1 Query: 61 FPMVPGIRRGHGPYVKASC------------------GRMLQGERPGSSGMIRPSQSQPIL-RGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 987 P VPG+RR Y+KA G+ L P ++ SQS+P+ R + + G SS + + + VLRFF Y+QEP+ E A+ VR+ + +++ D TISI+EP+I NSG+ QG+FMRR V + A + GDF +G ++ I GR F+IVDAD TR+ + ++G + S YP G +R V P+ S KG+F+ +DRKVLRF+C ++D R G+ RDYIL+Y+LLNDT+EI+EV Sbjct: 8 LPCVPGMRREMSGYMKAKTQNGGYAPRGHLLTEKPPVGKALTFGAPTLDNVMVQSQSEPVFDRSFNKDYAMGPETSSP-----DATAAAAANNSDGTVLRFFVYYQEPL-EDYFESASSSTVRRCILNFYMEDATISIDEPKIANSGIDQGRFMRRTLVLKD---------------------------------------------ASVNFEAGDFFIGADINIFGRVFKIVDADSATRREYD-SMGMPMGGSLPYPAAPKGQQR--VRNPESPSRY---SKGQFFNRDRKVLRFYCTWQDDRTYGEFRDYILHYFLLNDTVEIREV 278
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: H3GCI7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCI7_PHYRM) HSP 1 Score: 121 bits (303), Expect = 5.680e-28 Identity = 85/251 (33.86%), Postives = 123/251 (49.00%), Query Frame = 1 Query: 259 SCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKG--------EFYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKE 984 S P +IT ++ VLRFFAYF EPV T RVR+ + ++LSD +ISI EPR+ NSG++QG+FMRR V R GGS+T + D Y P DF +G E+ ++GR F IV D TR ++ LG L YPD+ ++ +V K + + R G +F+ +KVLRF+ + D L + R ++L+YYL +DT+E+ E Sbjct: 104 STQPAWITHDRLVLRFFAYFMEPVELADGQ--TEERVRRVVVCFYLSDRSISISEPRVANSGIAQGEFMRRTIV-----------RKNGGSSTAFHRDDI----------------------SDDYYTPEDFRIGGELRLYGRTFHIVGCDAATRSFYTEALGETLETPRMYPDES-NSKMDEVDELKTQLRVRTRALGASKAEATRKFHDLSQKVLRFYASWHDDHPLYPETRYFVLHYYLCDDTVEVVE 318
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A662WIN0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIN0_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.050e-27 Identity = 84/248 (33.87%), Postives = 126/248 (50.81%), Query Frame = 1 Query: 268 PDYITKEKQVLRFFAYFQEPVH-EGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYG----AERAKVSVPKKRSMMPAREKG---EFYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKE 984 P ++T ++ VLRFFAYF EPV G ++ R+R+ + ++LSD ++SI EPR+ NSG++QG+FMRR V +P S G S D YAP DF VG E+ ++GR F +VD D TR+++ LGR L YPD+ E+ K + + + A E +F+ +KVLRFF ++D L + R ++L+YYL +DT+E+ E Sbjct: 94 PAWLTHDRLVLRFFAYFAEPVELADGRVEQ---RIRRVVVCFYLSDRSLSISEPRVANSGIAQGEFMRRTAVRKP---------SRG-------------------------------SDLDDQYAPEDFRVGGELRLYGRTFHLVDCDEATRRFYAEALGRTLSSPCKYPDESGSKTDEVEQLKTQLRARTRAIGASEAEATRKFHDLSQKVLRFFTSWRDEHPLYPETRRFVLHYYLCDDTVEVVE 298
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A068WZC5_ECHGR (EF hand domain containing family member C2 n=3 Tax=Echinococcus TaxID=6209 RepID=A0A068WZC5_ECHGR) HSP 1 Score: 121 bits (303), Expect = 9.120e-27 Identity = 94/275 (34.18%), Postives = 127/275 (46.18%), Query Frame = 1 Query: 211 RPGTAGSSVPGHTWE----------GSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKG------EFYKKDRKVLRFFCKYKDS-RLQGDKRDYILYYYLLNDTIEIKE 984 +PG G +PG + GS P +IT +KQVL F AYFQ+ VHE S D +RVR+ ++++L D+TI + EPRI NS L QG +RR ++ +P P Y DF VG ++ ++GR +R+V D T F R LG + E PDD Y R VS +M P R +F DR VLRFFC + D+ L GD RD++L Y+L +DTIEI E Sbjct: 11 KPGIGGEPLPGQRIDPPKSRYPDGHGSSAPAWITFDKQVLCFEAYFQQAVHE--SRDEQ-YRVRRCQVLFYLEDDTIQVTEPRIQNSALPQGTIVRRHRIRKP---------------PPYEGC---------------------------FYTVDDFNVGMDLELYGRVYRLVSCDKFTAN-FLRKLGVRVNEPEPIPDDPYTIHRISVSD----AMQPRRPHERVDTLRQFLNHDRHVLRFFCTWDDTGSLYGDVRDFVLNYFLGDDTIEIHE 235
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A6A3FYA6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FYA6_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.370e-26 Identity = 82/248 (33.06%), Postives = 122/248 (49.19%), Query Frame = 1 Query: 268 PDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKG--------EFYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKE 984 P +IT ++ VLRFFAYF EPV T R+R+ + ++LSD +ISI EPR+ NSG+ QG+FMRR V R +G + + + D Y+P DF +G E+ ++GR F IVD D TR ++ LG L YPD+ ++ +V K + + R G +F+ +KVLRF+ + D L + R ++L+YYL +DT+EI E Sbjct: 107 PAWITHDRLVLRFFAYFTEPVELADGR--TENRIRRVVVCFYLSDRSISISEPRVANSGIPQGEFMRRTVV-----------RKSGNKSNSLPRENI----------------------SDDFYSPEDFRIGGELRLYGRIFHIVDCDAATRSFYTEALGEALETPRMYPDESR-SKLDEVDELKNQLQVRTRVLGASKAEATRKFHDLSQKVLRFYASWHDDHPLYPETRHFVLHYYLCDDTVEIVE 318
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A0D2JH69_9CHLO (EF-hand domain-containing protein 1 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JH69_9CHLO) HSP 1 Score: 116 bits (291), Expect = 1.690e-26 Identity = 80/265 (30.19%), Postives = 125/265 (47.17%), Query Frame = 1 Query: 256 GSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSV----PKKRS----------------MMPAREKGEFYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKEV 987 G +P ++ +++VLRF+ YFQE V E + R+R+ ++ Y+L+D+++ + EP+ NSG+ QG F+RR QV R G AT V P D VG + ++GR F +VD D TR WF+ NL ++ YP D A R K + P K+S ++ + +F + KVLRF+C + D + + GD+R Y+L++YL +DT+EI EV Sbjct: 13 GETLPKWVENDRKVLRFWGYFQESVTES---NIENHRMRRVALHYYLADDSLQVAEPKQDNSGIPQGIFVRRHQVPR----------GDGSGATIV---------------------------------PADLAVGATIDVYGRTFFLVDCDQFTRAWFRENLQLEQADAQGYPSDQVDAYRTKFGLTSTGPSKKSNDLATFVEARLGKPSHLLEGDKLRQFIANNGKVLRFWCVWDDRQGMYGDRRPYVLHFYLEDDTVEINEV 231
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A329RR92_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RR92_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.880e-26 Identity = 85/248 (34.27%), Postives = 124/248 (50.00%), Query Frame = 1 Query: 268 PDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYG----AERAKVSVPKKRSMMPAREKGE----FYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKE 984 P +IT ++ VLRFFAYF EPV T RVR+ + ++LSD +ISI EPR+TNSG+ QG+FMRR V + S S T R + + D Y+P DF +G E+ ++GR F IVD D TR ++ LG L YPD+ + K + ++R+ K E F+ +KVLRF+ ++D L + R +I++YYL +DT+E+ E Sbjct: 107 PAWITHDRLVLRFFAYFTEPVELADGR--TEKRVRRVVVCFYLSDRSISISEPRVTNSGIPQGEFMRRTVVRK----------SGNKSLTFPRE-----------------------NTSDDFYSPEDFRIGGELRLYGRTFHIVDCDAATRSFYSEALGETLETPRMYPDESNSRMNEVDELKNQL-RERTRAIGASKAEATRKFHDLSQKVLRFYASWRDDHPLYPETRYFIVHYYLCDDTVEVIE 318 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7703.16644.1 >prot_L-elsbetiae_contig7703.16644.1 ID=prot_L-elsbetiae_contig7703.16644.1|Name=mRNA_L-elsbetiae_contig7703.16644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp MSTRWATSMPALPLAASSSEFPMVPGIRRGHGPYVKASCGRMLQGERPGSback to top mRNA from alignment at L-elsbetiae_contig7703:5110..8531+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7703.16644.1 ID=mRNA_L-elsbetiae_contig7703.16644.1|Name=mRNA_L-elsbetiae_contig7703.16644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3422bp|location=Sequence derived from alignment at L-elsbetiae_contig7703:5110..8531+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7703:5110..8531+ >mRNA_L-elsbetiae_contig7703.16644.1 ID=mRNA_L-elsbetiae_contig7703.16644.1|Name=mRNA_L-elsbetiae_contig7703.16644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig7703:5110..8531+ (Laminarionema elsbetiae ELsaHSoW15)back to top |