prot_L-elsbetiae_contig77.16639.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig77.16639.1
Unique Name	prot_L-elsbetiae_contig77.16639.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	313

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig77.16639.1 vs. uniprot
Match: D7G6E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E8_ECTSI)

HSP 1 Score: 509 bits (1310), Expect = 2.720e-180
Identity = 261/315 (82.86%), Postives = 290/315 (92.06%), Query Frame = 0

Query:    1 MGNASSIDMMRRCVGIEVAQPIVKSLAGATQHVFEMLAVFAMYGKIPARLKVRNLFDMFDLDLDGNLNSSETIMMLRSVLSGIAKSTGGILPNITGLEAIWQHIVRLGFTDEEGRMPYTSWISFCSKTREVHALGKSIDFNKGVCRKSLTSGTRATLSAMSLGEDDAVLAAQRAALTKKPPERASVAMEKKRAA---REGKNRFARSSVLKIKEVFDTLDIDGSGYVDEQEWRRRTEDTALAASDDTFLFIQREREGKISIVEVLSEVHPFAADADLAKMLEWISEEPAQPGAARLVNRELAVAERMEMAALFSM 312
            MGNASS +M+RRCVG+E+A P+VKSLAGATQHVFEMLAV  MYGKIPARLKV+NLFD+FDLDLDG LNSSETI+MLRS+L GIAKSTGG+LPNI+ ++AIWQHIVRLG+TDEEG +P+  WI+FCSKTREVHALGKS+DFNKGVCRKSLTSGTRATLSAM LGEDDAV+AAQRAALTKKP ERASVA+EKKRAA   REG+NRFARSS++KIKEVFD++D DGSGYVDE+EWRR TEDT LAASDDTFLFI+REREGKISIVEVL EVHPFA DADLAKMLEWISEE  Q GAAR+VN ELAVAER+EMA LFSM
Sbjct:    1 MGNASSTEMIRRCVGLEIAPPVVKSLAGATQHVFEMLAVLTMYGKIPARLKVKNLFDLFDLDLDGKLNSSETIVMLRSLLHGIAKSTGGVLPNISDIQAIWQHIVRLGYTDEEGLLPFARWITFCSKTREVHALGKSLDFNKGVCRKSLTSGTRATLSAMVLGEDDAVMAAQRAALTKKPQERASVAVEKKRAAAAAREGRNRFARSSIMKIKEVFDSIDKDGSGYVDEEEWRRLTEDTPLAASDDTFLFIEREREGKISIVEVLCEVHPFAGDADLAKMLEWISEETIQQGAARIVNPELAVAERLEMAELFSM 315

[Close]

BLAST of mRNA_L-elsbetiae_contig77.16639.1 vs. uniprot
Match: A0A6H5JDE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE5_9PHAE)

HSP 1 Score: 478 bits (1229), Expect = 4.250e-166
Identity = 257/365 (70.41%), Postives = 287/365 (78.63%), Query Frame = 0

Query:    1 MGNASSIDMMRRCVGIEVAQPIVKSLAGATQHVFE---------------------------------------------------MLAVFAMYGKIPARLKVRNLFDMFDLDLDGNLNSSETIMMLRSVLSGIAKSTGGILPNITGLEAIWQHIVRLGFTDEEGRMPYTSWISFCSKTREVHALGKSIDFNKGVCRKSLTSGTRATLSAMSLGEDDAVLAAQRAALTKKPPERASVAMEKKRAA---REGKNRFARSSVLKIKEVFDTLDIDGSGYVDEQEWRRRTEDTALAASDDTFLFIQREREGKISIVEVLSEVHPFAADADLAKMLEWISEEPAQPGAARLVNRELAVAERMEMAALFS 311
            MGN SS +M+RRCVG+E+A P+VKSLAGATQHVFE                                                   MLAV  MYGKIPARLKV+NLFD+FDLD+DG LNSSE I+MLRS+L GIAKSTGG+LPNI+ +EAIWQHIVRLG+TDEE R+P+  WI+FCSKTREVHALGKS+DF+KGVCRKSLTSGTRATLSAM LGEDDAV+AAQRAALTKKP ERASVA+EKKRAA   REG+NRFARSS++KIKEVFD++D DGSGYVDE+EWRR TEDT LAASDDTFLFI+REREGKISIVEVL E+HPFA DADLAKMLEWISEE  Q GAAR VNRELAVAER+EMA LFS
Sbjct:    1 MGNGSSTEMIRRCVGLEIAPPVVKSLAGATQHVFEAVEARTKAMDLPPGLDAVHVAQALGEGRGSQADLVVAIMETKGNGRIDVYEMLAVLTMYGKIPARLKVKNLFDLFDLDVDGKLNSSEAIVMLRSLLHGIAKSTGGVLPNISDIEAIWQHIVRLGYTDEEERLPFARWITFCSKTREVHALGKSLDFSKGVCRKSLTSGTRATLSAMVLGEDDAVMAAQRAALTKKPQERASVAVEKKRAAAAAREGRNRFARSSIMKIKEVFDSVDKDGSGYVDEEEWRRLTEDTPLAASDDTFLFIEREREGKISIVEVLCELHPFAGDADLAKMLEWISEETTQQGAARKVNRELAVAERLEMAELFS 365

[Close]

BLAST of mRNA_L-elsbetiae_contig77.16639.1 vs. uniprot
Match: A0A835ZE04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE04_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.220e-16
Identity = 80/272 (29.41%), Postives = 122/272 (44.85%), Query Frame = 0

Query:   22 IVKSLAGATQH----VFEMLAVFAMYGKIPARLKVRNLFDMFDLDLDGNLNSSETIMMLRSVLSGIAKSTGGILPNITGLEAIWQHIVRLGFTDEEGRMPYTSWISFCSKTREVHALGKSIDFNKGVCRKSLT----SGTRATLSAMSLGEDDAVLAAQRAALTKKPPERASVAMEKKRAAREGKNRFARSSVLKIKEVFDTLDIDGSGYVDEQEWRRRTEDTA--LAASDDTFLFIQREREGKISIVEVLSEVHPFAADADLAKMLEWISE 283
            +++ L+G  QH    VFE+L+      K+P+  ++R LFD+ D+D DG L   E ++++RS L  +AK T G  P    L  I + I +         +    W+SFC     V A    +  N  +CRK  +     G               + AA    +    P R + ++ K R   + K      +VLK+  VF   D  GSG +    W R     A  L+A              ++SIV+VL   +PFAADA++A+ML WIS+
Sbjct:   69 VLRCLSGPKQHGLVDVFEVLSAACFLTKMPSAHRLRELFDIHDVDGDGVLGFCECLLLVRSSLHVLAKLTQGKAPEPDQLVTITEAIFKANTQPAAAAIGMEEWLSFCRGDAAVRAAAARV--NSILCRKMASVFKPGGXXXXXXXXXXXXXSELKAASLVRIAS--PVRPAPSVHK-RPRPQLKMGHGSDAVLKLHAVFAAADKSGSGVIAADTWHRLMGHAAGTLSAYGP-----------QLSIVDVLQAAYPFAADAEMAQMLTWISD 324

[Close]

BLAST of mRNA_L-elsbetiae_contig77.16639.1 vs. uniprot
Match: A0A8J4DAP7_9CHLO (Uncharacterized protein n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DAP7_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 9.350e-6
Identity = 32/104 (30.77%), Postives = 57/104 (54.81%), Query Frame = 0

Query:  186 VAMEKKRAAREGKNRFARSSVLKIKEVFDTLDIDGSGYVDEQEWRRRTEDTALAASD-DTFLFIQREREGKISIVEVLSEVHPFAADADLAKMLEWISEEPAQP 288
            V++ KK+   EG ++++RS +LK+KE+FD+ D+D  G V   E      +  L  S   TF  +  ++   ++  E L  ++P+A D ++  ML W+   P +P
Sbjct:   24 VSLAKKKRLGEG-SKYSRSDILKLKEMFDSHDLDNDGRVTASELLSALREGPLRQSALSTFRSVDMDKNCVLTFSEYLRRIYPYANDREVKVMLAWVKRIPTEP 126

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig77.16639.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig77.16639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7G6E8_ECTSI	2.720e-180	82.86	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JDE5_9PHAE	4.250e-166	70.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835ZE04_9STRA	3.220e-16	29.41	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A8J4DAP7_9CHLO	9.350e-6	30.77	Uncharacterized protein n=3 Tax=Volvox reticulifer...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 208..236 e-value: 0.011 score: 24.9 coord: 51..79 e-value: 1.7 score: 16.0
IPR002048	EF-hand domain	PFAM	PF13202	EF-hand_5	coord: 209..231 e-value: 7.4E-4 score: 18.9
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 204..239 score: 10.999
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 47..82 score: 9.715
None	No IPR available	GENE3D	1.10.238.10		coord: 31..141 e-value: 4.3E-6 score: 28.1
None	No IPR available	GENE3D	1.10.238.10		coord: 145..282 e-value: 1.0E-5 score: 27.5
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 217..229
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 51..261

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig77	contig	L-elsbetiae_contig77:56042..59627 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig77.16639.1	mRNA_L-elsbetiae_contig77.16639.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig77 56042..59627 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig77.16639.1 ID=prot_L-elsbetiae_contig77.16639.1|Name=mRNA_L-elsbetiae_contig77.16639.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=313bp
MGNASSIDMMRRCVGIEVAQPIVKSLAGATQHVFEMLAVFAMYGKIPARL
KVRNLFDMFDLDLDGNLNSSETIMMLRSVLSGIAKSTGGILPNITGLEAI
WQHIVRLGFTDEEGRMPYTSWISFCSKTREVHALGKSIDFNKGVCRKSLT
SGTRATLSAMSLGEDDAVLAAQRAALTKKPPERASVAMEKKRAAREGKNR
FARSSVLKIKEVFDTLDIDGSGYVDEQEWRRRTEDTALAASDDTFLFIQR
EREGKISIVEVLSEVHPFAADADLAKMLEWISEEPAQPGAARLVNRELAV
AERMEMAALFSM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair