mRNA_L-elsbetiae_contig77.16633.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig77.16633.1
Unique NamemRNA_L-elsbetiae_contig77.16633.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: D7G6E1_ECTSI (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E1_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 2.540e-121
Identity = 194/214 (90.65%), Postives = 202/214 (94.39%), Query Frame = 1
Query:    1 FPLCHADGHMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFMVRE 642
            F    +DGHMLYMGKDKYENEDLIRYG PEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRK+V+VVYTRWQNLEKK SYEAGQVGYKDES+VFKCRVEK NAIVNALNRTKREEHP+LA LQEERAKE+RREQKALRKKK  XXXXXXXXXXXX  LRSYDTLFEESKMASNADVAA+EDASASIAFEDDFMVR+
Sbjct:    3 FYFTSSDGHMLYMGKDKYENEDLIRYGFPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKXXXXXXXXXXXXXXXXLRSYDTLFEESKMASNADVAATEDASASIAFEDDFMVRQ 216          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A835Z4I1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I1_9STRA)

HSP 1 Score: 281 bits (719), Expect = 1.550e-93
Identity = 147/210 (70.00%), Postives = 169/210 (80.48%), Query Frame = 1
Query:   16 ADGHMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVA----ASEDASASIAFEDDFM 633
            + GH LYMGKDKYENEDLIRYG+PEDVWFHVDNLSSAHVYLRMN+GEKLKE+ P +++ECC LVKANSIEGCK+KDV VVYTRW NL K  S EAGQVG+KDESKV K RVEK NAIVNALNR+K E  PDL ALQEERA E RREQKA+RK++E             KR+RSYD+LF+E KMA + +V+    ASED S+++AFEDDFM
Sbjct:    7 SSGHTLYMGKDKYENEDLIRYGLPEDVWFHVDNLSSAHVYLRMNKGEKLKEVLPEVIMECCQLVKANSIEGCKKKDVEVVYTRWMNLRKSNSMEAGQVGFKDESKVHKVRVEKNNAIVNALNRSKTEASPDLQALQEERAAEIRREQKAVRKQQEQAEKIARRQAEEDKRMRSYDSLFDEGKMAGSTNVSNPYGASEDQSSAVAFEDDFM 216          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A6H5KW36_9PHAE (NFACT-R_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW36_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 5.290e-87
Identity = 153/164 (93.29%), Postives = 159/164 (96.95%), Query Frame = 1
Query:  142 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633
            MNRGEKLKELDPALLVECCTLVKANSIEGCKRK+V+VVYTRWQNLEKK SYEAGQVGYKDES+VFKCRVEK NAIVNALNRTKREEHP+LA LQEERAKE+RREQKALRKKKE XXXXXXXXXXXX RLRSYDTLFEESKMASNADVAA+EDASASIAFEDDFM
Sbjct:    1 MNRGEKLKELDPALLVECCTLVKANSIEGCKRKEVNVVYTRWQNLEKKASYEAGQVGYKDESRVFKCRVEKTNAIVNALNRTKREEHPNLAELQEERAKEHRREQKALRKKKEXXXXXXXXXXXXXXRLRSYDTLFEESKMASNADVAATEDASASIAFEDDFM 164          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A4D9D3G1_9STRA (NFACT-R_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3G1_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.190e-60
Identity = 112/168 (66.67%), Postives = 134/168 (79.76%), Query Frame = 1
Query:   37 MGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYD 540
            MGKDKYENE+LIR+G+PEDVWFHVD LSSAHVYLR   G+KL ++   LL+EC +LVKANSIEGCK K+V VVYTRW+NL+K  S EAGQ+G+ D SKV   +V+K N+IVNALN+TK E  PDL A QE RA EYR  QKA ++ +E XXXXXXXXXXX  +LRSY+
Sbjct:    1 MGKDKYENEELIRFGLPEDVWFHVDELSSAHVYLRQKPGQKLDDISSDLLLECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERFPDLQAEQEARAVEYRAAQKASKRDQEXXXXXXXXXXXXEAKLRSYE 168          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A6U6DJ37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DJ37_9STRA)

HSP 1 Score: 193 bits (490), Expect = 8.430e-59
Identity = 115/202 (56.93%), Postives = 144/202 (71.29%), Query Frame = 1
Query:   28 MLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633
            MLYMGKDKYENEDLI++G PEDVWFHVD+LSSAHVYLRM  G  L ++ P  ++EC  LVKANSI+GCK K V+VVYTRW+NL+K      GQVG+     V +  VEK N IVNALN+TK E HPDL   Q++R +E + E+KA       XXXXXXXXXXXXK   SY+ + ++  M SNA+  A+ DA+A+  +E+DF 
Sbjct:   13 MLYMGKDKYENEDLIKFGQPEDVWFHVDDLSSAHVYLRMKPGMTLSDIPPDAILECAALVKANSIQGCKMKSVYVVYTRWKNLKKTSQMVDGQVGFHRPENVKRMEVEKHNPIVNALNKTKEERHPDLYKEQQDRLREIQEEKKANXXXXXXXXXXXXXXXXXXKERLSYNRIMKDDNMTSNAERTATADATAAEEYEEDFF 214          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: B8C9M3_THAPS (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9M3_THAPS)

HSP 1 Score: 191 bits (484), Expect = 8.480e-58
Identity = 105/210 (50.00%), Postives = 134/210 (63.81%), Query Frame = 1
Query:   25 HMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPS-------YEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633
            + +YMGKDKYENEDLI+YG PED WFHVD+LSSAHVYLR+  G  L ++    L +CC LVKANSI+GCK+  V+VVYTRW+NL+K  S          GQVG+     V +  +EK N IVN LN+TK E+HP+LA  Q++R KE + E K  RK  +             K  RSYD +  E  M SNA+  A+ D++A+  FEDDFM
Sbjct:   12 YTIYMGKDKYENEDLIKYGHPEDCWFHVDDLSSAHVYLRLKPGMTLDDIPEDCLTDCCALVKANSIQGCKKSSVYVVYTRWKNLKKASSTCQDTSDMVDGQVGFHRPDNVRRTNIEKNNPIVNQLNKTKEEKHPNLAKQQQDRMKEIQTELKEKRKADDKAKRLEELERARIKEERSYDRIMGEHNMTSNAERNATADSTAAEEFEDDFM 221          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: K0TEU7_THAOC (NFACT-R_1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEU7_THAOC)

HSP 1 Score: 187 bits (475), Expect = 1.570e-56
Identity = 103/203 (50.74%), Postives = 141/203 (69.46%), Query Frame = 1
Query:   25 HMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633
            + +YMGKDK+ENE LI+YG+PEDVWFHVD+LSSAHVYLR+  G+ L ++    L++CC+L KANSI+GCK+  V++VYTRW+NL+K      GQVGY   + V + + EK N +V  L +TK+E  PDLA  Q  R +E +  +KA  + +      XXXXXX  K  RSY+ +F + KM SNAD+ A+ D SA++ +EDDFM
Sbjct:   12 YTIYMGKDKHENETLIKYGLPEDVWFHVDDLSSAHVYLRLKPGQTLDDIPEEALIDCCSLCKANSIQGCKKSTVYIVYTRWKNLKKTSGMVDGQVGYHRPNNVRRRQTEKNNPVVRQLEKTKKELFPDLAQEQAARMREIQELKKAHMRAEAKAKKLXXXXXXRLKEERSYERIFSQDKMTSNADMNATVDDSAAVDYEDDFM 214          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: W7TY76_9STRA (Lycopene beta cyclase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TY76_9STRA)

HSP 1 Score: 200 bits (508), Expect = 4.150e-56
Identity = 118/190 (62.11%), Postives = 147/190 (77.37%), Query Frame = 1
Query:   43 KDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASI 612
            KDKYENE+LIR+G+PEDVWFHVD+LSSAHVYLR   G+KL ++   LL EC +LVKANSIEGCK K+V VVYTRW+NL+K  S EAGQ+G+ D SKV   +V+K N+IVNALN+TK E +PDL A QE RA EYR  QKA ++ +E XXXXXXXXXXXX +LRSY++L  +  M SN    ++ D SA++
Sbjct:   68 KDKYENEELIRFGLPEDVWFHVDDLSSAHVYLRQKPGQKLDDISSDLLHECSSLVKANSIEGCKMKEVKVVYTRWRNLKKTKSMEAGQIGFHDPSKVRTIKVQKCNSIVNALNKTKEERYPDLQAEQEARAVEYRAAQKASKRDQEKXXXXXXXXXXXXAKLRSYESLMNDGGMESNKKWGSTADVSAAL 257          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A7S3L4J2_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4J2_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.200e-55
Identity = 110/197 (55.84%), Postives = 145/197 (73.60%), Query Frame = 1
Query:   43 KDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633
            +DKYENEDLIRYG+PEDVWFHVD+LSSAHVYLRM  G  L ++   LL++C +LVKANSI+GCK+  V+VVYTRW+NL+K  S   GQVG+     V +  VEK   IV A+ +TK+E++PDLA LQ++R++E + E+K   K+   XXXXXXXXXXXX   +SYD + +E  M +NA   A+ DA+A+  +EDDFM
Sbjct:   36 QDKYENEDLIRYGLPEDVWFHVDDLSSAHVYLRMKPGMTLDDISEDLLLDCASLVKANSIQGCKKSSVYVVYTRWKNLKKTNSMVDGQVGFHRPDNVRRMEVEKNGPIVRAIEKTKKEDYPDLAQLQQDRSREIQMEKKEEYKRXXXXXXXXXXXXXXXXEAKSYDRIMKEENMVTNATRQATVDATAAEEYEDDFM 232          
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Match: A0A6B2LIL4_9EUKA (NFACT-R_1 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LIL4_9EUKA)

HSP 1 Score: 183 bits (465), Expect = 4.240e-55
Identity = 99/204 (48.53%), Postives = 136/204 (66.67%), Query Frame = 1
Query:   25 HMLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDPALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDESKVFKCRV-EKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKKELXXXXXXXXXXXXKRLRSYDTLFEESKMASNADVAASEDASASIAFEDDFM 633
            + +YMGKDK+ENE+LI+YG+PED+WFHVDNLSSAHVYLR+  G+ + ++   +L +CC LVK NSI+GCK  +V +VYT W NL+K  S E GQVG+ ++  V K +V +K NAIVN L +TK+E HPDL A+QE+R  E RR++K  +++   XX          + +R+Y    E  KM SN DV  +        +EDDFM
Sbjct:   13 YTIYMGKDKFENEELIKYGLPEDIWFHVDNLSSAHVYLRLPPGKTITDIPGEVLEDCCQLVKQNSIQGCKIDNVPIVYTPWSNLKKTQSMEVGQVGFHNQKLVLKYKVAKKVNAIVNRLEKTKKELHPDLKAMQEQRLNEIRRDEKNEKERLXXXXMDKIAENKREEDIRTYKDFMEPEKMISNYDVQDN--------YEDDFM 208          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig77.16633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6E1_ECTSI2.540e-12190.65NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z4I1_9STRA1.550e-9370.00NFACT-R_1 domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KW36_9PHAE5.290e-8793.29NFACT-R_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A4D9D3G1_9STRA1.190e-6066.67NFACT-R_1 domain-containing protein n=1 Tax=Nannoc... [more]
A0A6U6DJ37_9STRA8.430e-5956.93Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B8C9M3_THAPS8.480e-5850.00NFACT-R_1 domain-containing protein n=1 Tax=Thalas... [more]
K0TEU7_THAOC1.570e-5650.74NFACT-R_1 domain-containing protein n=1 Tax=Thalas... [more]
W7TY76_9STRA4.150e-5662.11Lycopene beta cyclase n=1 Tax=Nannochloropsis gadi... [more]
A0A7S3L4J2_9STRA2.200e-5555.84Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A6B2LIL4_9EUKA4.240e-5548.53NFACT-R_1 domain-containing protein n=1 Tax=Arcell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig77contigL-elsbetiae_contig77:24289..26612 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.7
Seed ortholog evalue2.9e-92
Seed eggNOG ortholog2880.D7G6E1
Preferred nameCCDC25
KEGG koko:K04989
KEGG TC1.A.5.1.2
KEGG Pathwayko04742,map04742
Hectar predicted targeting categoryother localisation
GOsGO:0001581,GO:0003008,GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0007600,GO:0007606,GO:0008150,GO:0008324,GO:0009268,GO:0009581,GO:0009582,GO:0009593,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0010447,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032501,GO:0032991,GO:0034220,GO:0034702,GO:0034703,GO:0042221,GO:0043235,GO:0044424,GO:0044425,GO:0044464,GO:0046873,GO:0050877,GO:0050896,GO:0050906,GO:0050907,GO:0050909,GO:0050912,GO:0050915,GO:0050982,GO:0051179,GO:0051234,GO:0051606,GO:0051716,GO:0055085,GO:0070588,GO:0070838,GO:0071214,GO:0071467,GO:0071468,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0104004,GO:1902495,GO:1990351
EggNOG free text desc.Domain of unknown function (DUF814)
EggNOG OGsKOG3272@1,KOG3272@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04040
Ec32 ortholog descriptionDomain of unknown function DUF814
Ec32 orthologEc-10_001520.1
Exons6
Model size642
Cds size615
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816854.996824-CDS-L-elsbetiae_contig77:24288..244201622816854.996824-CDS-L-elsbetiae_contig77:24288..24420Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 24289..24420 -
1691683863.980823-CDS-L-elsbetiae_contig77:24288..244201691683863.980823-CDS-L-elsbetiae_contig77:24288..24420Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 24289..24420 -
1622816855.0074627-CDS-L-elsbetiae_contig77:24772..248331622816855.0074627-CDS-L-elsbetiae_contig77:24772..24833Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 24773..24833 -
1691683863.9938064-CDS-L-elsbetiae_contig77:24772..248331691683863.9938064-CDS-L-elsbetiae_contig77:24772..24833Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 24773..24833 -
1622816855.017584-CDS-L-elsbetiae_contig77:25225..253681622816855.017584-CDS-L-elsbetiae_contig77:25225..25368Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 25226..25368 -
1691683864.0041833-CDS-L-elsbetiae_contig77:25225..253681691683864.0041833-CDS-L-elsbetiae_contig77:25225..25368Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 25226..25368 -
1622816855.0295687-CDS-L-elsbetiae_contig77:25778..258741622816855.0295687-CDS-L-elsbetiae_contig77:25778..25874Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 25779..25874 -
1691683864.016293-CDS-L-elsbetiae_contig77:25778..258741691683864.016293-CDS-L-elsbetiae_contig77:25778..25874Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 25779..25874 -
1622816855.0412245-CDS-L-elsbetiae_contig77:26201..262521622816855.0412245-CDS-L-elsbetiae_contig77:26201..26252Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 26202..26252 -
1691683864.026164-CDS-L-elsbetiae_contig77:26201..262521691683864.026164-CDS-L-elsbetiae_contig77:26201..26252Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 26202..26252 -
1622816855.0537086-CDS-L-elsbetiae_contig77:26453..265851622816855.0537086-CDS-L-elsbetiae_contig77:26453..26585Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 26454..26585 -
1691683864.0359242-CDS-L-elsbetiae_contig77:26453..265851691683864.0359242-CDS-L-elsbetiae_contig77:26453..26585Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig77 26454..26585 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816855.066473-UTR-L-elsbetiae_contig77:26585..266121622816855.066473-UTR-L-elsbetiae_contig77:26585..26612Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig77 26586..26612 -
1691683864.0549479-UTR-L-elsbetiae_contig77:26585..266121691683864.0549479-UTR-L-elsbetiae_contig77:26585..26612Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig77 26586..26612 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig77.16633.1prot_L-elsbetiae_contig77.16633.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig77 24289..26585 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig77.16633.1

>prot_L-elsbetiae_contig77.16633.1 ID=prot_L-elsbetiae_contig77.16633.1|Name=mRNA_L-elsbetiae_contig77.16633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
MLYMGKDKYENEDLIRYGVPEDVWFHVDNLSSAHVYLRMNRGEKLKELDP
ALLVECCTLVKANSIEGCKRKDVHVVYTRWQNLEKKPSYEAGQVGYKDES
KVFKCRVEKANAIVNALNRTKREEHPDLAALQEERAKEYRREQKALRKKK
ELEEKIARKQKEEEKRLRSYDTLFEESKMASNADVAASEDASASIAFEDD
FMVRE
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mRNA from alignment at L-elsbetiae_contig77:24289..26612-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig77.16633.1 ID=mRNA_L-elsbetiae_contig77.16633.1|Name=mRNA_L-elsbetiae_contig77.16633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2324bp|location=Sequence derived from alignment at L-elsbetiae_contig77:24289..26612- (Laminarionema elsbetiae ELsaHSoW15)
TTCCCTCTGTGTCATGCAGATGGGCACATGCTGTACATGGGCAAAGACAA GTACGAGAACGAGGACCTGATCCGCTACGGCGTGCCGGAAGATGTTTGGT TTCACGTCGATAATTTGAGTTCGGCTCATGTCTATCTCCGAATGAACCGA GGCGAAAAGGTGAGGAGCAAGCGAGATGAGGAACATGGCGCCCACCCGAG TGTTTGCAGGGATAGACATGGTGCAGTGTTTTCAGTTGACCATTGCAATA TGATACCAAGTACCTCTGTAAATTGTGTACCCTGCAATACCTTGTTTACA CCGTTTGAAAGCTGAGAGATGACAAAGCATATCCCCGTGTTTCGTTTGTA CCCTTCGCAGTTGAAAGAACTCGACCCTGCGCTGCTTGTGGAGTGCTGCA CTCTTGTCAAGGTGGGCGCTGCTTGGTGGGCACTCCGCTAGCACGTGGTT TGTGCATACCATGGCATGAAACGATCCGGTTGAAAACTCTCTTGGCGCTG TAGACCCTGCTTCGTTGCGCGACTAACACGGCGGGCAAGAGATGGCGGGT TTGGCATGCTGCATACTTGTAGGATTTATCGTCCTTGTTTACACAGCTGG GTCTCGTCAAATGGTTTCGTGTCGCCAAAAGAGAGCATAAGCGGTTCCGT TGTGGCAGGACAGCATTCTTTATTGTAGCAAGATGAGTAAGCACACCGCT CTACCACAAAAATGAATACCGCGATGACTCTCTTCCAGGCGAACTCTATC GAGGGATGCAAGCGAAAGGATGTCCACGTTGTCTACACTCGGTGGCAGAA TCTGGAAAAGAAGCCCAGTTACGAGGCAGGACAGGTAGGAAGACAACCGT GGGTATCTACTCCAGGCAAGAAAGCTGTCCTGGTACGTTCGATCCTTTCG TCTTAAGGTCGACGTGACAGTTCATCCTAAGTGCCAGCAGCATGAAGGCT GTGGGTAGGACTACTGTGTTGAATACGTCCTGGTCCGACCAGCCCTTCAC TTGGTTTTTCCAATCTTTCGGGGTGCAGGGTACCACGTTGCTGTCTGAGC GAAACATTGGCTGTCAGAACGAATTCTGTGTTTGTGCGAAACCAAATTCA GCGGGCATCCCTTGTCGTACGGCATGCGGCTGTATCAATTCGTGGCTCAT CGCCCTGTTGAGCTTGTGATAAAATCAGATCTTGTGGTGTCGCGTCGTTT TTTCTTCTTACCCATACTGTGGGCGGCGCTATGGGCGGCGCCAGGTGGGG TATAAAGACGAGAGCAAGGTGTTCAAGTGCCGCGTTGAGAAGGCCAACGC TATCGTCAACGCTTTGAACCGCACCAAGCGCGAAGAGCATCCGGATCTTG CGGCGTTGCAAGAGGAGCGGGCCAAGGAGTACCGGAGGTACGGTACTGGA TACGCGTAGCGAAAATTTGAAGCAGCTGTGCAGCTGGAATTGGGGTCTGG AAACAAGGGAGACTTGATACGTCGAAGACAGCCTAGCTTGCAACGGTACC GGGCCGGTATGAAGTGTGTCTGGGTTTCGCCTGGCACTGCGGTCGAGTGC ATCCTGCATAAATTTAAGCATAAATAGCCGTACCGGGACTTGGAAAGCAG CGTTTCATGTCAGCACTGAAGGATGGGGCAACATAGTGGAAACATAGATA GAGTTGTGGGTTTTCGAAAAATGTCTCTCAAGATGCAGCATACTGACAAC GGGTGGCTCTTCGTGGATCAGCGCTTGAAATCGTTCACACGCATTCCGCC CCCCTCGTTGTCGTTGACCTTTTTTACAGAGAACAAAAGGCCTTGAGAAA GAAGAAGGAACTGGAGGAAAAGATTGCTCGGAAACAGAAGGTACTCACAT GGCCATGGCGGTTCTCTTATGTGGGATTTCACTTGTTTCAGCAAGATTCG GTTTTGGCCACAGCAGTGGTGTTTTGCGGTCGAAAAGGAGGGTGATTTTG TCGATCGATAGAATGACGGGTGTACGCTTGACCTACAATTGCATGGTGCA CACAGTTAGCTCGCCGGTTGCATGCTTTTACAAAACTTGGCAACAGCCCC TGTCATTTTTGTTGCCTTGTCCTTAAGCCTCACTGCTGACTTTTTCTCTG CCTTATCCCTCCCCCTATTGAATAATGGATGCTTCGGCGCACTCTGGCAC TTGGGTGGCGAACGCTGATGTGCGCCCGCGCGCCCGCCGTAGGAGGAGGA GAAGCGGCTACGATCGTACGACACACTGTTCGAGGAGTCGAAAATGGCGT CAAATGCCGATGTTGCAGCATCAGAGGATGCTAGCGCTTCCATTGCGTTT GAGGACGACTTTATGGTGAGGGAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig77:24289..26612-

>mRNA_L-elsbetiae_contig77.16633.1 ID=mRNA_L-elsbetiae_contig77.16633.1|Name=mRNA_L-elsbetiae_contig77.16633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1230bp|location=Sequence derived from alignment at L-elsbetiae_contig77:24289..26612- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGTACATGGGCAAAGACAAGTACGAGAACGAGGACCTGATCCGCTA
CGGCGTGCCGGAAGATGTTTGGTTTCACGTCGATAATTTGAGTTCGGCTC
ATGTCTATCTCCGAATGAACCGAGGCGAAAAGATGCTGTACATGGGCAAA
GACAAGTACGAGAACGAGGACCTGATCCGCTACGGCGTGCCGGAAGATGT
TTGGTTTCACGTCGATAATTTGAGTTCGGCTCATGTCTATCTCCGAATGA
ACCGAGGCGAAAAGTTGAAAGAACTCGACCCTGCGCTGCTTGTGGAGTGC
TGCACTCTTGTCAAGTTGAAAGAACTCGACCCTGCGCTGCTTGTGGAGTG
CTGCACTCTTGTCAAGGCGAACTCTATCGAGGGATGCAAGCGAAAGGATG
TCCACGTTGTCTACACTCGGTGGCAGAATCTGGAAAAGAAGCCCAGTTAC
GAGGCAGGACAGGCGAACTCTATCGAGGGATGCAAGCGAAAGGATGTCCA
CGTTGTCTACACTCGGTGGCAGAATCTGGAAAAGAAGCCCAGTTACGAGG
CAGGACAGGTGGGGTATAAAGACGAGAGCAAGGTGTTCAAGTGCCGCGTT
GAGAAGGCCAACGCTATCGTCAACGCTTTGAACCGCACCAAGCGCGAAGA
GCATCCGGATCTTGCGGCGTTGCAAGAGGAGCGGGCCAAGGAGTACCGGA
GGTGGGGTATAAAGACGAGAGCAAGGTGTTCAAGTGCCGCGTTGAGAAGG
CCAACGCTATCGTCAACGCTTTGAACCGCACCAAGCGCGAAGAGCATCCG
GATCTTGCGGCGTTGCAAGAGGAGCGGGCCAAGGAGTACCGGAGAGAACA
AAAGGCCTTGAGAAAGAAGAAGGAACTGGAGGAAAAGATTGCTCGGAAAC
AGAAGAGAACAAAAGGCCTTGAGAAAGAAGAAGGAACTGGAGGAAAAGAT
TGCTCGGAAACAGAAGGAGGAGGAGAAGCGGCTACGATCGTACGACACAC
TGTTCGAGGAGTCGAAAATGGCGTCAAATGCCGATGTTGCAGCATCAGAG
GATGCTAGCGCTTCCATTGCGTTTGAGGACGACTTTATGGTGAGGGAAGA
GGAGGAGAAGCGGCTACGATCGTACGACACACTGTTCGAGGAGTCGAAAA
TGGCGTCAAATGCCGATGTTGCAGCATCAGAGGATGCTAGCGCTTCCATT
GCGTTTGAGGACGACTTTATGGTGAGGGAA
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