prot_L-elsbetiae_contig7698.16631.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7698.16631.1
Unique Nameprot_L-elsbetiae_contig7698.16631.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length240
Homology
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BLAST of mRNA_L-elsbetiae_contig7698.16631.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 5.800e-6
Identity = 26/39 (66.67%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    1 MLNVVSKRCTHHGCTKLPSYGKAGSK-AEYCRDHAEDGM 38
            M++VVSKRC H GCTK PSYG  GSK AE C  HA  GM
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7698.16631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI5.800e-666.67EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7698contigL-elsbetiae_contig7698:6633..8510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7698.16631.1mRNA_L-elsbetiae_contig7698.16631.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7698 6611..8580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7698.16631.1 ID=prot_L-elsbetiae_contig7698.16631.1|Name=mRNA_L-elsbetiae_contig7698.16631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp
MLNVVSKRCTHHGCTKLPSYGKAGSKAEYCRDHAEDGMASVASKRCAVPG
CTTRASYGDENAGTREFCARHAEEGMVCLSGRSRGDSKRSDSTDDSGARG
SGTASRAGSGEKQRSRAPAPLPAAEASSGRSRETNRRAHRSAGDGDLDPV
RVKREGIGNRVADDEETRACPEPKGVVKTEDLDVSCKVEPAEGAGDATQA
RKKRRLTTGGGGRDAPESGHRPFVAPAATRRGCAIAGGS*
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