mRNA_L-elsbetiae_contig7693.16627.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 100 bits (250), Expect = 1.680e-20 Identity = 71/168 (42.26%), Postives = 85/168 (50.60%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQEDCNEGTVCTAEDLKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYRGWLRS-----SSSGGRAVEIEQDTSLTSCAPPGWWKYFTSSALRGLAWVSGYKLGWPCDWSVGMRDGNRPPSLVERIV 489 QV YYGLLQLFLT RAVYLLVWDA++ EG +L+ L I PWL L+FR+P VILVGNKCD + A A VE R WL S R + +E SL SCA +S + +A G + GWPCD S P L RI+ Sbjct: 435 QVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGL-----NLEDLAIAPWLRHLTFRVPDASVILVGNKCDRVVRTRRTAV--AVDVEHESRQWLESWIEIARGHQPRGISLEDGVSLVSCA---------ASGVGAVAPSFGRRSGWPCDKST--------PGLFHRII 578
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 100 bits (248), Expect = 3.030e-20 Identity = 76/183 (41.53%), Postives = 96/183 (52.46%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDAS---QEDCNEGTVCTAED---LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYRGWLRSSSSGG-RAVEIEQDTSLTSCAPPGWWKYFTSSA----LRGLAWVSGYKLGWPCDWSVGMRDGNRPPSLVERIVRVGDNGPLR 516 QVAY GLLQ+FLT RAV +LV +A Q+ +E ED L+ L + WL ++S R+P DVILV KCDL G A + +R+E A R WL S G + V +E SLTSC G ++ SS L+G GW CDW M DGN PSL+ R+V D LR Sbjct: 252 QVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGN---AGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKG---------GWACDWR-DMADGNPSPSLLHRLVNKPDGRGLR 421
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 5.850e-20 Identity = 68/171 (39.77%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQEDCNEGTVCTAEDLKT-------LGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYRGWLRS-SSSGGRAVEIEQDTSLTSCAPPGWWKYFTSSALRGLAWVSGYKLGWPCDWSVGMRDGNRPPSLVERIV 489 QVAY GLLQ+FL+ RAV LLV D +GT+ ++ LK L + WL +LSFR+P DV++V KCDL +G AA R+E A WL S S +G AV +E SLTSC PP A G W CDW G+ ++P SL+ R++ Sbjct: 342 QVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGM---GTDAAGRIEGAIGEWLESWSGAGMNAVHVEDGVSLTSCFPPT--PNEDGGAALGKRKSPDEDSTWACDWREGVSVESQP-SLLHRVM 506
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 1.920e-19 Identity = 76/183 (41.53%), Postives = 94/183 (51.37%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQ-----EDCNEGTVCTAED---LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYRGWLRS-SSSGGRAVEIEQDTSLTSCAPPGWWKYFTSSALRGLAWVS--GYKLGWPCDWSVGMRDGNRPPSLVERIVRVGDNGPLR 516 QVAY GLLQ+FLT R+V +LV +A+ E N G V ED L+ L + WL ++S R+P DVILV KCDL G AA+ RVE A R WL S G + V++E S TSC P G G K W CDW M+D + PPSL+ R+V D G LR Sbjct: 202 QVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEV--EEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGN---AAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFP-------AEGGQHGEVGTENHGSKGDWACDWH-DMKDDHPPPSLLHRLVNKPDGGGLR 371
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 4.380e-19 Identity = 70/179 (39.11%), Postives = 95/179 (53.07%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQ--EDCNEGTVCTAED----LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYRGWLRSSSSGGR-AVEIEQDTSLTSCAPPGWWKYFTSSALRGLAWVSGYKLGWPCDWSVGMRDGNRPPSLVERIVRVGDNGPLR 516 QVAY GLLQ+FLT R+V +LV +A + + + E+ L+ L + WL ++S R+PG DVILV KCDL +G + Q R+E A R WL S G +V +E+ SLTSC P G ++ + RG K GW CDW + PSL+ R+V D G LR Sbjct: 232 QVAYTGLLQMFLTPRSVCVLVCNAGEFRQQLGSDNIDQVEEDCRKLEGLRVCDWLRSISCRVPGNDVILVATKCDLVNGNVEETGQ---RIEHACRTWLSSWVRNGMDSVRLERHVSLTSCFPIGASEH--GESRRG---NHALKQGWACDWR-DVEGDMSSPSLLYRLVNKPDQGGLR 401
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 2.160e-18 Identity = 70/179 (39.11%), Postives = 93/179 (51.96%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQ--EDCNEGTVCTAED----LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYRGWLRSSSSGGR-AVEIEQDTSLTSCAPPGWWKYFTSSALRGLAWVSGYKLGWPCDWSVGMRDGNRPPSLVERIVRVGDNGPLR 516 QVAY GLLQ+FLT R+V +LV +A + + V E+ L+ L + WL ++S R+PG DVILV KCDL SG + + R+E A R WL + G V +E SLTSC P G ++ S+ + K GW CDW D PSL+ R+V D G LR Sbjct: 183 QVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAE---ETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDAS-----KQGWACDWRHVEGD-KSSPSLLYRLVNKPDEGGLR 352
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 2.250e-18 Identity = 69/183 (37.70%), Postives = 94/183 (51.37%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQ-------EDCNEGTVCTAEDLKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYR----GWLRSSSSGGRAVEIEQDTSLTSCAPPGWWKYFTSSALRGLAWVSGYKLGWPCDWSVGMRDGNRPPSLVERIVRVGDNGPLR 516 QVAY GLLQ+FLT R+V +LV +A + EDC E L+ L + WL ++S R+P DVILV KCDL G A + SR+E++ R GW+R+ G + V +E LTSC P ++ SA + +K GW CDW + D PS + R+V D LR Sbjct: 466 QVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGN---AGEIGSRMENSCRTWLSGWVRN---GMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHV-----WKGGWACDWR-NVEDDQPSPSFLHRLVNKPDGRGLR 636
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 3.660e-18 Identity = 70/170 (41.18%), Postives = 84/170 (49.41%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQEDCNEGTVCTAEDLKTLGILPWLAALSFRLPGGDVILVGNKCD--LRSGAQDAAAQAASRVESAYRGWLRS-----SSSGGRAVEIEQDTSLTSCAPPGWWKYFTSSALRGLAWVSGYKLGWPCDWSVGMRDGNRPPSLVERIV 489 QV YYGLLQLFLT RAVY+LVWDA++ EG +L+ LGI PWL L+FR+P VILVGNKCD +R+ AA VE R WL S R + +E SL SCA +S + +A G GWP D P L RI Sbjct: 145 QVVYYGLLQLFLTPRAVYMLVWDAAKASEMEGL-----NLEDLGIAPWLRYLTFRVPDASVILVGNKCDHVVRTRRTVVAAD----VEHESRQWLESLIEIARGHQPRGISLEDGVSLVSCA---------ASGVGVVAPSFGAGSGWPFD--------KNTPGLYRRIA 288
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.720e-17 Identity = 69/170 (40.59%), Postives = 83/170 (48.82%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQEDCNEGTVCTAEDLKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYRGWLRSSSSGGRA-----VEIEQDTSLTSCAPPGWWKYFTSSALRGLAWVSGYKLGWPCDWSVGMRDGNRP--PSLVERIV 489 Q AYYGLLQLFLT RAVYLLVWDA E ++ EDL I PWL ++FR+P +V+LVGNK DL +A A VE R WL + + +E SL SCAP G G A G + WPCD N+P P L RI+ Sbjct: 134 QAAYYGLLQLFLTPRAVYLLVWDA--EKASQMDELNLEDL---AIAPWLRQMTFRVPDANVVLVGNKWDL---VAEANLHVADDVERKSREWLTAWIESAHRHQPPQLSLEAGVSLVSCAPSG---------RAGWAPSFGGRKAWPCDK-------NKPGQPGLFRRII 279
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.870e-17 Identity = 72/184 (39.13%), Postives = 91/184 (49.46%), Query Frame = 1 Query: 1 QVAYYGLLQLFLTRRAVYLLVWDASQEDCNEGTVCTA----ED---LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESAYRGWLRS-SSSGGRAVEIEQDTSLTSCAPPGWW----KYFTSSALRGLAWVSGYKLGWPCDWSVGMRDGNRPPSLVERIVRVGDNGPLR 516 QVAY GLLQ+FLT RAV ++V +A GT T ED L+ L + WL ++S R+P DVILV KCD G A + R+E A R WL S SG + V +E LTSC + + A+ G GW CDW G +D N PSL+ R+V D G LR Sbjct: 395 QVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGN---AGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTNVCEDGERSTRNQAMEG---------GWTCDWRDG-KDDNPSPSLLHRLVNKPDGGGLR 565 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7693.16627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7693.16627.1 >prot_L-elsbetiae_contig7693.16627.1 ID=prot_L-elsbetiae_contig7693.16627.1|Name=mRNA_L-elsbetiae_contig7693.16627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp QVAYYGLLQLFLTRRAVYLLVWDASQEDCNEGTVCTAEDLKTLGILPWLAback to top mRNA from alignment at L-elsbetiae_contig7693:8443..9443+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7693.16627.1 ID=mRNA_L-elsbetiae_contig7693.16627.1|Name=mRNA_L-elsbetiae_contig7693.16627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1001bp|location=Sequence derived from alignment at L-elsbetiae_contig7693:8443..9443+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7693:8443..9443+ >mRNA_L-elsbetiae_contig7693.16627.1 ID=mRNA_L-elsbetiae_contig7693.16627.1|Name=mRNA_L-elsbetiae_contig7693.16627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1146bp|location=Sequence derived from alignment at L-elsbetiae_contig7693:8443..9443+ (Laminarionema elsbetiae ELsaHSoW15)back to top |