mRNA_L-elsbetiae_contig769.16623.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: A0A6H5KWP2_9PHAE (DUF2407_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP2_9PHAE) HSP 1 Score: 246 bits (628), Expect = 5.780e-77 Identity = 156/310 (50.32%), Postives = 164/310 (52.90%), Query Frame = 2 Query: 344 MLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLTPEQAAEE----------------------------------------------------------------------------------------------------------------EVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASLPPSDREGETDWDRQVESEELWMRAQPATSEFALNVSMARRASGSGGLGGMAGGGMDGFDDDGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTV 937 MLNP++AL+KDFGLTENCYVHCV+TAAPPRLRLPSLTPEQAAEE EVE+DDPA RRGFDALRNNG R EVT IR YFSAQVRE VESEELWMRAQPATSEFALNVSMARR +G GG + G +DGFDD GSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTV Sbjct: 1 MLNPDEALIKDFGLTENCYVHCVITAAPPRLRLPSLTPEQAAEEASGNPGETSEVLLLTGGKERHLLLCTSCCIHLRGVSFWRSDTGRDGGPSSLSLVRRRGRFDASILSACLRIHQTRFDNRTGRFYGSLDKCRGGRYRRDLRGQAERRLESETEEVEDDDPATRRGFDALRNNGMTRGEVTAIRGYFSAQVRE-------------------VESEELWMRAQPATSEFALNVSMARRTTGPGGT--LTG--LDGFDDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTV 287
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: A0A7S2SSC9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSC9_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.440e-41 Identity = 109/263 (41.44%), Postives = 150/263 (57.03%), Query Frame = 2 Query: 179 EGGGDCLSFRVKTAGDG---REYSVSSTLTSTVAQFKTEVSRVIGAEGKYLRLISAGKMLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLTPEQA----AEEEVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASL--PPSD-REGETDWDRQVESEELWMRAQPATSEFALNVSMARRASGSGGLGGMAGGGMDGFDDD-GS----GGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVT 922 EGG + + RVKTA G E+ V++ L V + K V V+GA+GKYLRLI +G+ML P A + F L +H VV+ APPR PS +A ++ + EE R GFDALRN G RS V ++RAYF++QV E+A S P D ++GET+ R++ E+ W+ AQ EFA N M + + +G G +D+ GS G RDF++GF +G F GVIML WLWE RQK+GI+AG++ Sbjct: 22 EGGANAVRLRVKTANHGDVNAEHWVTARLGDPVDRLKRRVEEVVGAQGKYLRLICSGRMLAPPTAPLSSFKLKNEDVIHAVVSDAPPRNSYPSGPTSEARVADSDSDEEEGGAGRRLGFDALRNRGLTRSGVESLRAYFASQVDEYARSQGSPLFDLQDGETEQHRRLRWEDAWIHAQSEHGEFAANF-MPDPFAAPENMDATSGEGWGQVNDEVGSPLEEGSYRDFVWGFFLGFFFGVIMLFWLWEHG-SYRQKMGIMAGIS 282
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: A0A4D9DA21_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA21_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.690e-40 Identity = 104/252 (41.27%), Postives = 151/252 (59.92%), Query Frame = 2 Query: 197 LSFRVKTAGDGREYSVSSTLTS-TVAQFKTEVSRVI-GAEGKYLRLISAGKMLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLTPEQAAEEEVE----EDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASLPPSDR-EGETDWDRQVESEELWMRAQPATSEFALNVS--MARRASGSGGLGGMAGG-GMDGFDDDGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVT 922 +S R+KT D +E+ V + TV++ K+++SR + GAEGK+LRLI+ GK+L P+ A ++ F +++ VHCV + PPR + A EVE DDPA RRGFD LR +G++ EV +R+YF+AQV +AAS + + ET +R++ E+ WM Q SEFALN + +A RA + GGM G G++ G+G +RDF++GF MG LG I L WLW QK+GI+ GV+ Sbjct: 172 ISLRIKTL-DSKEHLVEVDASCLTVSELKSKLSRSLPGAEGKFLRLITQGKLLTPDTASLESFRISDRAVVHCVFSDQPPRAHIRVDLERGAGSGEVEYPDVNDDPAQRRGFDRLRTHGFSIQEVAALRSYFNAQVVAYAASREAEEGPDAETVEERRLRMEDEWMGRQGEESEFALNTNRVVATRAVFAARRGGMEDGRGLE----MGTGTSRDFLYGFIMGFALGFISLFWLWNVPQTHTQKMGIILGVS 418
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: A0A7R9U1S3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1S3_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.520e-39 Identity = 102/238 (42.86%), Postives = 141/238 (59.24%), Query Frame = 2 Query: 257 TSTVAQFKTEVSRVIGAEGKYLRLISAGKMLNPEDALVKDF--GLTENCYVHCVVTAAPP--RLRLPSLTPEQA-AEEEVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASLPPSDREGETDWDRQVESEELWMRAQPATSEFALNVSMARRAS-------GSGGLGG--MAGGGMDGFDDDGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFK 928 T TV + K V++++ A KY+RLI++G+ML P+ ALV+ F L + +VH VVTA P RLR L P A A E+ +E DP + GFD LR++G+ R+EV +R+YF +R+ A L REGE++ D Q+ EE W+ Q SE+ N RR S GS L + G G+ D G RDF++GF MG FLGVIML WLWE +V +RQK+GI+ GV+ + Sbjct: 27 TQTVLEAKKAVAQLLNAGDKYVRLIASGRMLAPDAALVEQFCPPLQDGAFVHAVVTAKPNPGRLRASLLRPTPAGATEDDDEVDPTSLHGFDRLRSSGFGRAEVLALRSYFRRHLRDHAEQL--QQREGESNRDFQMRVEEDWVAQQGRGSEWDFNT--RRRESLGDDIEEGSRSLSNAHVFGPGLGDMDVAAPGSMRDFVWGFFMGFFLGVIMLFWLWERSVSQRQKMGIIFGVSLQ 260
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: A0A024USD5_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USD5_9STRA) HSP 1 Score: 134 bits (337), Expect = 9.460e-34 Identity = 96/254 (37.80%), Postives = 133/254 (52.36%), Query Frame = 2 Query: 197 LSFRVKTAGDGREYSVSSTLTSTVAQFKTEVSRVIGAEGKYLRLISAGKMLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLTPEQAAEEEVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASLPPSDREGETDWDRQVESEELWMRAQPATSEFALNVSMARRASGSGGLGGMAGGGMDGFDD-------------DGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGV 919 L+ RVKT + + ++ T+TV K + AEGK+LRLI GK+LN + A++ + N ++HC +++ PP+ + +T +Q ++V D+P RRGFD LR+ R EV +R +F QV + REGE+ DR EE WM AQ SEFALNV R G G + M+ F D D G T D ++G AMG LG ML LWE ++PRRQKLGI+ GV Sbjct: 31 LTLRVKTLSE-KPLNIDINATATVGDLKDMIKTKGHAEGKFLRLIHQGKLLNDDKAVLLSSNVKNNDFIHCAMSSVPPKSLVQQMTHQQ---DDVASDEPNHRRGFDCLRDT-LTREEVQALRLHFYPQVSAMISQSVA--REGESVEDRIYRVEEEWMAAQGPQSEFALNV----RPRG----GHIT---MESFHDSIHRIDMPDMPLIDNEGTTVDMIWGVAMGLILGFFMLFLLWERSIPRRQKLGIVVGV 266
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: W4HE28_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE28_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.770e-33 Identity = 96/244 (39.34%), Postives = 133/244 (54.51%), Query Frame = 2 Query: 197 LSFRVKTAGDGREYSVSSTLTSTVAQFKTEVSRVIGAEGKYLRLISAGKMLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLTPEQAAEEEVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASLPPSDREGETDWDRQVESEELWMRAQPATSEFALNVSMARRASGSGGLGGMAGGGMDGFDD---DGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGV 919 L+ RVKT + + ++ + T++V + K + AEGK+LRLI GKMLN + A + + +N ++HC ++ APP+ + +T +Q EE D+P RRGFD LR+ +R +V +R +F QV + REGE+ DR EE WM AQ SEFALNV R G + A +D D D G T D ++G AMG LG ML LWE +PRRQKLGI+ GV Sbjct: 31 LNLRVKTLSE-KPLNIDISATASVGELKDMIKAKGEAEGKFLRLIHQGKMLNDDKAALLSCNIKQNDFIHCAMSNAPPKSLVQQMTHQQ---EEAALDEPTHRRGFDCLRDT-LSREDVQALRLHFYPQVSTMISQSVA--REGESVEDRIYRIEEEWMAAQGPQSEFALNV---RPRGGPMTIHDSAHHRIDMPDMSSVDNEGTTVDMVWGVAMGFVLGFFMLFLLWERTIPRRQKLGIVIGV 264
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: A0A8K1CL14_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL14_PYTOL) HSP 1 Score: 132 bits (333), Expect = 4.190e-33 Identity = 88/245 (35.92%), Postives = 138/245 (56.33%), Query Frame = 2 Query: 191 DCLSFRVKTAGDGREYSVSSTLTSTVAQFKTEVSRVIGAEGKYLRLISAGKMLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLT-PEQAAEEEVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASLPPSDREGETDWDRQVESEELWMRAQPATSEFALNVSMARRASGSGGLGGMAGGGMDGFDDDGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVT 922 D L +VKT + + V + +V K + + AEGK+LRLI GKML+ + A ++ + + ++HC +TA PP+ + ++ PE E+ ++DDP+ RRGFD LR+ +R E+ +R YF Q+ ++ + GE+ DR EE WM +Q SEFALNV R + + G + D++G+G +F++GF MG LGV MLL L + +VPR+QK+G+L GV+ Sbjct: 41 DLLVLKVKTLSE-KPIVVEILPSESVGTLKEMIKKQANAEGKFLRLIHQGKMLSDDKATLESYKIKSEDFIHCAITAVPPKAVVNQMSAPEN---EQEDQDDPSRRRGFDRLRDR-LSREEIQALRLYFYPQLSQYISQAERVP--GESSEDRIYRLEEEWMASQGPHSEFALNVVPTARIAMESQM--DMNGSILAADNEGTG--TEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKIGLLLGVS 274
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: A0A0P1ADY7_PLAHL (Ubiquitin family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADY7_PLAHL) HSP 1 Score: 131 bits (329), Expect = 1.370e-32 Identity = 97/262 (37.02%), Postives = 153/262 (58.40%), Query Frame = 2 Query: 149 LSDKELG-AMEEGGGDCLSFRVKTAGDGREYSVSSTLTSTVAQFKTEVSRVIGAEGKYLRLISAGKMLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLTPEQAAEEEVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASLPPSDR-EGETDWDRQVESEELWMRAQPATSEFALNV-SMARRASGSG-GLGGMAGGGMDGFDDDGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVT 922 LS++ +G + E + +VKT + + V +++VA+ K V + + AEGK+LRLI GKML+ + A ++ + ++ +VHC ++AAPP+ + + A E E+DD RRGFD LR+ +R E+ +R YF Q+ F + ++R GE+ DR EE WM +Q SEFALNV AR A+ + + GM+ + D++G+G +F++GF MG LGV MLL L + +VPR+QK+G+L GV+ Sbjct: 16 LSEESVGITINESISGIIVLKVKTLSE-KPLRVEIVHSASVAELKELVKKKVNAEGKFLRLIHQGKMLSDDKATLESCKVKDDDFVHCAISAAPPKAIINQVA--STAIELEEQDDETTRRGFDRLRDR-LSREEIQALRLYFYPQLSVF---ISRAERIHGESSEDRIYRLEEEWMASQGPQSEFALNVVPTARIATDTQIDINGMSNS-ILAADNEGTG--TEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVS 267
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: G4YL67_PHYSP (Ubiquitin-like domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=G4YL67_PHYSP) HSP 1 Score: 130 bits (326), Expect = 4.320e-32 Identity = 88/248 (35.48%), Postives = 134/248 (54.03%), Query Frame = 2 Query: 203 FRVKTAGDGREYSVSSTLTSTVAQFKTEVSRVIGAEGKYLRLISAGKMLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLTPEQAAEEEVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREF---AASLPPSDREGETDWDRQVESEELWMRAQPATSEFALNVSMARRASGSGGLGGMAGGGMDGFDD-----DGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVT 922 ++KT + + V +S+V + K V + AEGK+LRLI GKML+ + A ++ + ++HC +++APP+ + + + E DDPA RRGFD LR+ +R E+ +R YF Q+ + AA +P GE+ DR EE WM +Q SEFALNV R + + M+G ++ D G +F++GF MG LGV MLL L + +VPR+QK+G+L GV+ Sbjct: 39 LKIKTLSE-KPLRVEVAPSSSVGELKELVKKKANAEGKFLRLIHQGKMLSDDKATLESCKVKNEDFIHCAISSAPPKAVVNQMAAAGTDSDPEERDDPATRRGFDRLRDR-LSREEIQALRLYFYPQLSVYISQAARVP-----GESSEDRIYRLEEEWMASQGPQSEFALNVVPTARIAMDTQID------MNGMNNSILAADNEGTGTEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVS 273
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Match: A0A2D4BQE0_PYTIN (Ubiquitin family protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQE0_PYTIN) HSP 1 Score: 130 bits (326), Expect = 4.730e-32 Identity = 90/253 (35.57%), Postives = 132/253 (52.17%), Query Frame = 2 Query: 191 DCLSFRVKTAGDGREYSVSSTLTSTVAQFKTEVSRVIGAEGKYLRLISAGKMLNPEDALVKDFGLTENCYVHCVVTAAPPRLRLPSLTPEQAAEEEVEEDDPAARRGFDALRNNGYARSEVTTIRAYFSAQVREFAASLPPSDREGETDWDRQVESEELWMRAQPATSEFALNVSMARRASGSGGLGGMAGGGMDGFDD---------DGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVT 922 D L +VKT + + V T+TV + K V + AEGK+LRLI GKML+ + A ++ + + ++HC ++AAPP+ + ++ +Q EE +DP+ RRGFD LR+ +R EV +R Y + + + GE+ DR EE WM +Q SEFALNV R + MD D D G +F++GF MG LGV MLL L + +VPR+QK+G+L GV+ Sbjct: 44 DRLVLKVKTMTE-KPIVVEIVATATVGELKEIVKKQTNAEGKFLRLIHQGKMLSDDKATLESYKIKSEDFIHCAISAAPPKAVVNQMSADQEPEER---EDPSRRRGFDRLRDR-LSREEVQALRLYXYPXLSLYISQAERVP--GESSEDRIYRLEEEWMASQGPHSEFALNVVPTARIA------------MDQMDANVDSSILAADNEGTGTEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKIGLLLGVS 277 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig769.16623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig769.16623.1 >prot_L-elsbetiae_contig769.16623.1 ID=prot_L-elsbetiae_contig769.16623.1|Name=mRNA_L-elsbetiae_contig769.16623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=301bp MTPAVEDAIPAVQSSVPLLSRRRGSLSNSSSSAKNDSSLSDKELGAMEEGback to top mRNA from alignment at L-elsbetiae_contig769:17565..28004+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig769.16623.1 ID=mRNA_L-elsbetiae_contig769.16623.1|Name=mRNA_L-elsbetiae_contig769.16623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10440bp|location=Sequence derived from alignment at L-elsbetiae_contig769:17565..28004+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig769:17565..28004+ >mRNA_L-elsbetiae_contig769.16623.1 ID=mRNA_L-elsbetiae_contig769.16623.1|Name=mRNA_L-elsbetiae_contig769.16623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1806bp|location=Sequence derived from alignment at L-elsbetiae_contig769:17565..28004+ (Laminarionema elsbetiae ELsaHSoW15)back to top |