mRNA_L-elsbetiae_contig7687.16621.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A6H5KG25_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG25_9PHAE) HSP 1 Score: 623 bits (1607), Expect = 4.920e-213 Identity = 318/381 (83.46%), Postives = 353/381 (92.65%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKWDSVKADQLQRARQTLGMDEEVSKEMHKEVYRSEALKLVKKEREGVEMKLDPEDKIRVNKLAAIFDLSEEEATDEYEAVVNPIYEELVVDCLGKIMNDPDASQPDLARTYGELMMFVANTGLRAEKAESSLRNIMTASVEYMFEDAAQYVRVANQKEGAKAARGLASFVQKTMDMVSINVTDDDTGDKAYNLVIGGSIVSGESYSDAPGLYEMFLKSCFAQNALEDGDTETIALLAKLLQIDEARQVKVYRDAAGPRVLRQLTESVQAGLETGKFPAEAKQANEALIESFKV 1143 AASPVYSQFVMRTPS ELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEM+R+SK+FDL+LGEVKERCAAIA PFY+KALGSAA KW+SVKADQL+RARQTLGMDEEV+ EMHKEVYR+EALKLV K+ E +MKLD DK R+ KLAA F+LSEE+AT EYE+VVNPIYEELVV+CLGKIMN+P+AS+PDLAR YGELMMF ANTGLR+E+AE SLRNIMTASV+YMFEDAAQYVRVANQKEGAKAARG+A+FVQ T+DMVSINV DD+TG+K YN+VIG SI+SGESYSDAPGLYEMFL SCFAQ A+E+GDT+TIALLAKLL+IDE RQVK YRDAAGPRVLRQLTESVQ+GLETG FP EAK ANEALIESFK+ Sbjct: 232 AASPVYSQFVMRTPSAELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEMSRISKMFDLNLGEVKERCAAIANPFYRKALGSAAAKWESVKADQLKRARQTLGMDEEVAHEMHKEVYRAEALKLVTKDGEARDMKLDRADKARLGKLAAAFELSEEDATAEYESVVNPIYEELVVECLGKIMNEPEASKPDLARMYGELMMFSANTGLRSERAEESLRNIMTASVQYMFEDAAQYVRVANQKEGAKAARGMAAFVQSTLDMVSINVADDETGEKTYNMVIGESIISGESYSDAPGLYEMFLSSCFAQPAMEEGDTKTIALLAKLLEIDELRQVKAYRDAAGPRVLRQLTESVQSGLETGVFPQEAKDANEALIESFKI 612
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A835YSG6_9STRA (IAP100 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG6_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.320e-55 Identity = 138/381 (36.22%), Postives = 208/381 (54.59%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKWDSVKADQLQRARQTLGMDEEVSKEMHKEVYRSEALKLVKKEREGVEMKLDPEDKIRVNKLAAIFDLSEEEATDEYEAVVNPIYEELVVDCLGKIMN----DPDASQPDLARTYGELMMFVANTGLRAEKAESSLRNIMTASVEYMFEDAAQYVRVANQKEGAKAARGLASFVQKTMDMVSINVTDDDTGDKAYNLVIGGSIVSGESYSDAPGLYEMFLKSCFA-QNALEDGDTETIALLAKLLQIDEARQVKVYRDAAGPRVLRQLTESVQAGLETGKFPAEAKQANEALI 1128 A++ +Y + V+ TP ELADE++P RRALDKF+FL DRMFEV DTEEAY +EM R+ K+F L +V RC AIA PFY KAL +AA + D+++ L+ A +TLG+ + + EMH E YR+EA L+ EG ++K + R+ KL L EE+ E EAV P+YE V L + + DPD ++ A G L L A+ + L++ + + F AA++VRV N + +AA+ L +FV+ +V + G+ + GS+V S + LY ++L + A Q AL D + LA+L+ + + Y++A GP + + L +S+ E G + A+AK NEAL+ Sbjct: 172 ASTLLYRERVLFTPEEELADEYNPARRALDKFLFLADRMFEVSDTEEAYEYEMGRIRKVFGLDAADVNARCLAIARPFYAKALDAAAARLDTLRPGALELAEKTLGITDVMRDEMHLEAYRAEARALL----EGTKLKDGAVE--RLGKLGNALKLDEEQQRQELEAVTVPVYEAAVARELEQALEATNEDPDTARRQSALRSGRLASMQLGLSLSADTSARVLQSSVRNAASTHFIAAAKFVRVGNNAKALEAAKELVAFVKAASGLVE-KAFGLEEGEDPVRKIFQGSMVDDLSRKEGGQLYRIYLNAALAGQTALTDEQAADLKTLARLMGQGASEVQRAYQEATGPLLRKALEDSI----EDGGYGADAKARNEALV 541
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A7S3VC95_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VC95_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.410e-23 Identity = 101/370 (27.30%), Postives = 178/370 (48.11%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMF-EVCDTEEAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKW--DSVKADQLQRARQTLGMDEEVSKEMHKEVYRSEALKLV----KKEREGVEMKLDPEDKIRVNKLAAIFDLSEEEATDEYEAVVNPIYEELVVDCLGKIMNDPDASQPDLARTYGELMMFVANTGLRAEKAESSLRNIMTASVEYM----FEDAAQYVRVANQKEGAKAARGLASFVQKTMDMVSINVT---DDDTGDKAYNLVIGGSIVSGE-SYSDAPGLYEMFL----KSCFAQNALEDGDTETIALLAKLLQIDEARQVKVYRDAAGPRVLRQL 1053 AA Y Q + TP +L D P+R ++DK++FL +R F + +T+EA+ FEM+R++K FD+SLGE +R A +A PFYQKAL S +K D+V AD L RAR +LG+DE + +++ + E L+ K E E +K R++KL I L + EA E + I++ + C+ + + + T ++ + ++N ++++++I+++ V FE+ + +V N EGA + + + K + + + DKA+ S G + D LY +FL +S + L + T+ + +L I + + +R GP + + L Sbjct: 227 AAKEFYRQTALFTPLEDLEDPDHPDRMSIDKYLFLSERTFRQAGETDEAFKFEMSRIAKAFDISLGEALDRVAEVAEPFYQKALDSTRSKLETDAVSADMLLRARNSLGIDELSANDLNLNCFTEEVQALLGKAGKSEEELATIKFSDGSSERLSKLQGILGLEDHEADYEISSEATAIFQANALACIEEAIAG--------SVTAEDIWVKISNRKDELLLKDTAMKDILSSMVMQAMGKPFEETLTFAKVNN--EGATEEKLVDALAAKEVCRAVFEQSGWEEFSDFDKAFFDPASKSSACGMLARQDRLRLYRIFLTRAVRSSESGKELTENSFNTVKEVKNMLGITDEDEATEFRVNFGPELQKSL 586
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A7S2SEM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SEM4_9STRA) HSP 1 Score: 110 bits (276), Expect = 8.920e-23 Identity = 105/384 (27.34%), Postives = 180/384 (46.88%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMF-EVCDTEEAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKWDS--VKADQLQRARQTLGMDEEVSKEMHKEVYRSEALKLVKK-------------EREGVEMKLDPEDKIRVNKLAAIFDLSEEEATDEYEAVVNPIYEELVVDCLGKIMND-------PDASQPDLARTYGELMMFVANTGLRAEKAESSLRNIMTASVEYMFEDAAQYVRVANQKEGAKAARGLASFVQKTMDMVSINVTD----DDTGDKAYNLVIGGSIVSGESYSDAPGLYEMFLKSCFAQNALEDGDTETIALLAK------LLQIDEARQVKVYRDAAGPRVLRQL 1053 AA Q + TP +L D P+R ++DKF+F +R+F + +TEEA+ +EM+RV+K FDLSL +R A +A PFY +AL SA +K D+ V AD L+RAR TLG+D+ V+++MH + E L+ K E + MK K +++ LA + +L ++A E +P+++ + MND PD + D+ EL+ + + L +++ ++ E + +V N EGA + L + K + + +D +D K ++ S ++D LY +FLK +++ E G+ T L AK +L + + + ++ GP + + L Sbjct: 252 AAKDFSRQTSLFTPVEDLEDPDHPDRMSIDKFLFFSERIFHQGGETEEAFKYEMSRVAKAFDLSLRTAMDRVAEVAEPFYDRALQSARSKIDTGAVSADMLERARNTLGIDDSVARDMHIATFAEEVRSLLGKKSNDDDESEDSAEEVDEATMKFSDNAKEKLDLLAEVLNLETKDADYEISVEASPLFQAKAL----ASMNDSIAGTISPDQAWSDMEARQKELLF-------NDDAMKDLLASLVMQTMGQPLEATMTFAKVNN--EGATYDKLLEALEAKEAIISVLKNSDWEEFNDFEAKFFDPKSKSSACGFLEFADRLSLYRVFLKRSVSKS--ESGEELTEELYAKVKEVQGMLGLSDDDEASEFKKNFGPELQKSL 620
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A7S3ZQA9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQA9_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.900e-20 Identity = 98/352 (27.84%), Postives = 169/352 (48.01%), Query Frame = 1 Query: 37 TPSTELADEWSPNRRALDKFIFLCDRMFEVCDTE--EAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKWDSVKADQLQRARQTLGMDEEVSKEMHKEVYRSEALKLVKKEREGVEMKLDPEDKIRVNKLAAIFDLSEEEATDEYEAVVNPIYEELVVDCLGKIMNDPDASQPDLARTYG-ELMMFVANTGLRAEKAESSLRNIMTASVEYMFEDAAQYVRVANQKEGAKAARGLASFVQKTMDMVSINVT--DDDTGDKAYNLVIGGSIVSGESYSDAPGLYEM-FLKSCFAQNALEDGDT-ETIALLAKLLQIDEARQVKVYRDAAGPRVLRQLTESVQA 1071 T LADE S R + K +FL DR F D + E Y +E+ RV +FDL + RC+++A PFY++AL K SV A L+RAR LG+D+E + +MH + E L+K + +L D R+++LA++ +S E+A+ A PIY VD K +++ A+ + G EL L AE ++ + ++ + A+ +++ N GA A+ V++ +D+V N + G +A+ + G G+S + LY++ +++ C ED D E ++ LA L + +A V P++ +L E++++ Sbjct: 221 TSDEVLADESSAEYRTISKLLFLSDRAFATSDGKDSEEYGYEVGRVRAVFDLKRSTLDSRCSSVAAPFYERALAGTLEKLGSVDAAMLERARSKLGVDDEDAAKMHSQCLNEEIDLLLK------DGELTDSDAERLDQLASVLGISNEDASQAIAAKTVPIY----VDATRKAVDNAIAADEAAQKALGDELETLRKKLRLEDATAEGVFKDAVKGVLQAPYTAASSALKLQNTP-GALASLERLMDVRRGVDIVVANAKFLESSGGAEAFAETLAGG---GKSLPLS--LYKLVYVEKC------EDSDAQEELSNLAATLSLTDADTKMVREGVLAPKLDLKLAEALRS 550
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A7S2UAH8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAH8_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.100e-17 Identity = 61/147 (41.50%), Postives = 89/147 (60.54%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMFEVC-DTEEAYSFEMTRVSKIFDL--------------SLGEVKERCAAIATPFYQKALGSAATKWDS--VKADQLQRARQTLGMDEEVSKEMHKEVYRSEALKLVKK 390 AA +Y Q + TP ELAD P+R ALDKF+FL +R F +T EA+S+EM+R++K FD+ ++ E+ ER A +A PFY++AL S K DS V+ D L+RAR T+G+ EEV+++MH + E +L+ K Sbjct: 239 AAKDLYRQTCLFTPEEELADVDHPDRMALDKFLFLSERTFVGNGETPEAFSYEMSRIAKAFDIKITKSNAAAADVGGAMSEIMERVAHVAEPFYRRALVSTRAKLDSGAVQPDVLKRARATVGISEEVARDMHIQALTEEIRELLGK 385
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A1Z5J5X5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5X5_FISSO) HSP 1 Score: 95.5 bits (236), Expect = 1.460e-17 Identity = 99/387 (25.58%), Postives = 179/387 (46.25%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKW--DSVKADQLQRARQTLGMDEEVSKEMHKEVYRSEA---LKLVKKEREGV--------------EMKLDPEDKIRVNKLAAIFDLSEEEATDEYEAVVNPIYEELVVDCLGKIMND---PDASQPDLARTYGELMMFVANTGLRAEKAESSLRNIMTASVEYMFEDAAQYVRVANQK-------EGAKAARGLASFVQKTMDMVSINVTDDDTGDKAYNLVIGGSIVSGESYSDAPGLYEMFLKSCFA---QNALEDGDTETIALLAKLLQIDEARQVKVYRDAAGPRVLRQLTESV 1065 AA+ Y Q + TP+ EL D P+R A+DK +FL +R D+ +A++FEMTRV+K L+L ER A++ PFY +AL S +K ++V +D L+RAR+TLG+ EEV+ +MH + E L L +++ +K E R++ L I LSE + E + +P+Y+ + + ++ P+ + + + EL+M +T ++ + +++ ++ E+ ++ +V N+ E ++ L + ++K+ N D+T +N +S E + LY +FL + L D E I + LL I + + R A GP++ + L ++ Sbjct: 232 AAAEWYRQTCLFTPTEELEDPKHPDRLAMDKLLFLSERALSE-DSPQAFNFEMTRVAKAVGLTLPVAMERVASVVEPFYHRALQSTRSKLGTNAVSSDMLKRARETLGIKEEVAADMHVFTFNQEVRVCLGLPERKMNDXXXXXXXXAMPLDLSSLKFSDEALNRLDSLRDILGLSEMDMDYEIISEASPLYQTTALAAMKDVLTKNKTPEEAWNIMEKRREELLMHEDST-------KALISSMVMQALGGPLEETNRFAKVNNEAATYDHLLEALESKSALVAILKKSGWGEEFNTNFDETFCNPWNKQSANGFLSTE---ERIKLYRIFLGRSVRKAPEGRLTDEIFEQIGEVKGLLGITDQQAEIEARAAFGPQLQKTLNRAM 607
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: B7GEF3_PHATC (Translocator of the inner chloroplast envelope membrane 110k n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEF3_PHATC) HSP 1 Score: 92.0 bits (227), Expect = 2.050e-16 Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMFEVC-DTEEAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKW--DSVKADQLQRARQTLGMDEEVSKEMH 348 AA+ Y + TP+ +L D P+R+A+DKF+FL +R + +T+EA+SFEM RV+K FDLS EV ER A PFYQ+AL S +K + V + L+RAR+TLG+ + +K++H Sbjct: 251 AAAEWYRTTCLFTPTEDLEDPSHPDRQAMDKFLFLTERALKQGGETDEAFSFEMKRVAKAFDLSYTEVLERVAETVEPFYQRALKSTRSKLGTNQVSSAMLERARKTLGVSDATAKDLH 369
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A7S4EEP3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEP3_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.830e-15 Identity = 97/373 (26.01%), Postives = 164/373 (43.97%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMFEVCD-TEEAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKWDSVKADQ--LQRARQTLGMDEEVSKEMHKEVYRSEALKLVK---------------KEREGVEMKLDPEDKIRVNKLAAIFDLSEEEATDEYEAVVNPIYEELVVDCLGKIMND---PDASQPDLARTYGELMMFVANTGLRAEKAESSLRNIMTASVEYMFEDAAQYVRVANQKEGAKAARGLASFVQKTMDMVSINVTDD-DTGDKAY-NLVIGGSIVSGESYSDAPGLYEMFLKSCFAQNA---LEDGDTETIALLAKLLQIDEARQVKVYRDAAGPRV 1041 AA Y + TP +L D P+R+A+DK +FL +R + D T+ A+ FEM RVSK LSL + R A + PFY +AL S K K + L+RARQTLG+D++ + +MH + E + + E + + K + K ++ LA I LSE++A E A P Y+ + + +++ PD + + EL+ L ++ + L +++ S+ E A ++ +V N+ + Q + +++ + DD DT D + + S +S + LY +FLK + + D I + LL I + + Y A GP + Sbjct: 244 AAEEWYRTTCLFTPEEDLDDPDHPDRQAMDKLLFLTERALKQGDETDAAFRFEMARVSKFMKLSLVDGMYRVADVQQPFYARALVSTRAKLGEGKVSEAMLERARQTLGIDDDTAHDMHVACFNDEVREQLGLSADRNDGDDELDSGSEMDASKAKFGADAKEQLALLAEILGLSEDDADYEIVAETTPSYQATALSAMNAVLSGALTPDQAWDKIDARRQELL-------LPEDRCDDLLSSMVIQSLGGPLEKANKFSKVNNEVAVYENLLEALDAKQAMIKVLARSGWDDVDTFDSVFCDPWEEDSAISFIDSTVRNKLYNIFLKRTLRSSGDGKINDEMHARIKAVQGLLAISDDQSEGAYNAAFGPEL 609
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Match: A0A448YYM0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYM0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.900e-14 Identity = 67/207 (32.37%), Postives = 101/207 (48.79%), Query Frame = 1 Query: 1 AASPVYSQFVMRTPSTELADEWSPNRRALDKFIFLCDRMFEVC-DTEEAYSFEMTRVSKIFDLSLGEVKERCAAIATPFYQKALGSAATKWDSVKAD--QLQRARQTLGMDEEVSKEMHKEVYRSEALKLVKKEREGV-------------------EMKLDPEDKIRVNKLAAIFDLSEEEATDEYEAVVNPIYEELVVDCLGKIM 555 AA Y + TP +L D P+R+A+DKF+FL +R + +T+EA+ FEMTRV+K LSL + R A + PFY +AL S K K L+RARQTLG+D++ + +MH + E +++ G+ + K E K + LA I LSE +A E A P Y+E + + ++ Sbjct: 230 AADEWYRTTCLFTPEEDLEDPDHPDRQAMDKFLFLTERALKQGNETDEAFRFEMTRVAKSMKLSLMDAMFRVADVQQPFYARALVSTRAKLGEGKVSGAMLERARQTLGIDDDTAHDMHVACFNDEV-----RDQLGLPASTDDXXXXXXXXXXXXSKAKFGAEAKEELALLAEILGLSENDAAYEIVAETTPSYQETALSAMNAVL 431 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7687.16621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7687.16621.1 >prot_L-elsbetiae_contig7687.16621.1 ID=prot_L-elsbetiae_contig7687.16621.1|Name=mRNA_L-elsbetiae_contig7687.16621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=371bp MRTPSTELADEWSPNRRALDKFIFLCDRMFEVCDTEEAYSFEMTRVSKIFback to top mRNA from alignment at L-elsbetiae_contig7687:641..7762+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7687.16621.1 ID=mRNA_L-elsbetiae_contig7687.16621.1|Name=mRNA_L-elsbetiae_contig7687.16621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7122bp|location=Sequence derived from alignment at L-elsbetiae_contig7687:641..7762+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7687:641..7762+ >mRNA_L-elsbetiae_contig7687.16621.1 ID=mRNA_L-elsbetiae_contig7687.16621.1|Name=mRNA_L-elsbetiae_contig7687.16621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2226bp|location=Sequence derived from alignment at L-elsbetiae_contig7687:641..7762+ (Laminarionema elsbetiae ELsaHSoW15)back to top |