mRNA_L-elsbetiae_contig7680.16617.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: E6ZET8_ECTSI (Ribosomal protein L31 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET8_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 9.940e-21 Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 1 MNQSIQFKIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 M ++ K+FGS+LSDGSFRF+ L S+ SQ +L ++D +NH VWTG+RPK+QTEIS FI RL K Sbjct: 1 MQSCVKSKLFGSILSDGSFRFLQLPSYQSQRSLNYNKIDNLNHPVWTGKRPKEQTEISLFINRLNK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: A0A0U1XCD8_SCYLO (Ribosomal protein L31 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1XCD8_SCYLO) HSP 1 Score: 83.6 bits (205), Expect = 7.560e-20 Identity = 37/59 (62.71%), Postives = 49/59 (83.05%), Query Frame = 1 Query: 22 KIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 K FG++LSDGSF F+ L SFNSQ +L K++D+++H VWTG+RP +QTEIS+FI RLKK Sbjct: 8 KTFGNILSDGSFTFLILPSFNSQKSLNSKKIDLLSHPVWTGKRPVEQTEISSFINRLKK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: V9PB22_UNDPI (Ribosomal protein L31 n=2 Tax=Undaria pinnatifida TaxID=74381 RepID=V9PB22_UNDPI) HSP 1 Score: 83.2 bits (204), Expect = 1.130e-19 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 1 MNQSIQFKIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 M +++ KIFG++LSDGSF F+ L SF+SQ L K +D+ NH VWTG+RPK+QTEIS F+G+ K Sbjct: 1 MKSTVKSKIFGNILSDGSFNFLNLPSFHSQKELNCKNLDLNNHPVWTGKRPKEQTEISIFVGKFIK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: A0A3G5FPL5_9PHAE (Ribosomal protein L31 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPL5_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 4.730e-19 Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 1 MNQSIQFKIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 M +I+ K+FG++LSDGSF+F+ L S N +LKVKRVD NHSVWTG+R K+QTEI AFI R K Sbjct: 1 MRSNIKSKLFGNLLSDGSFKFLLLGSANLSQSLKVKRVDPNNHSVWTGQRSKEQTEIFAFIDRFNK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: A0A8F0K1A9_9PHAE (Ribosomal protein L31 n=1 Tax=Dictyoneurum californicum TaxID=169784 RepID=A0A8F0K1A9_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 9.540e-19 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 1 MNQSIQFKIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 M I+ K FGSVLSDGSF F+ L S++SQ L K VD+ NH VWTG+RPK+QTEIS F+G+ K Sbjct: 1 MKCRIKNKTFGSVLSDGSFNFLILPSYSSQKELNCKSVDLNNHPVWTGKRPKEQTEISLFVGKFTK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: A0A8E8PFJ7_9PHAE (Ribosomal protein L31 n=5 Tax=Alaria TaxID=2888 RepID=A0A8E8PFJ7_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 3.790e-18 Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 1 MNQSIQFKIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 M ++ K FG++LSDGSF F+ L S++SQ L K +D+ NH VWTG+RPK+QTEIS F+G+ K Sbjct: 1 MKSVLKSKTFGNILSDGSFNFLSLPSYSSQKELHCKNLDLNNHPVWTGKRPKEQTEISLFVGKFTK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: Q2TUD6_9PHAE (Ribosomal protein L31 n=1 Tax=Desmarestia viridis TaxID=62313 RepID=Q2TUD6_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 7.640e-18 Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1 Query: 1 MNQSIQFKIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 M I+ K+ G+ LSDGSF F+P+ S+ S L K++D INH VWTG+RPK+QTEI+AF+ R KK Sbjct: 1 MKLIIKSKLLGNTLSDGSFIFLPVPSYYSSCDLNPKKLDAINHPVWTGKRPKEQTEIAAFVDRFKK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: A0A0U1XGS1_9PHAE (Ribosomal protein L31 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XGS1_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.030e-17 Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 22 KIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 K+FG++LSDGS F L+S+ SQ L K++D++NH VWTG+RP +QTEIS+FI RL K Sbjct: 8 KLFGNILSDGSLVFRTLSSYQSQRFLNSKKIDLLNHPVWTGKRPSEQTEISSFINRLNK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: W5RG43_COSCS (Ribosomal protein L31 n=4 Tax=Laminariales TaxID=2886 RepID=W5RG43_COSCS) HSP 1 Score: 78.2 bits (191), Expect = 1.110e-17 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 1 MNQSIQFKIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLKK 198 M +I K FGSVLSDGSF F+ L S+ SQ L K +D+ NH VWTG+RPK+QTEIS F+G+ K Sbjct: 1 MKWAINKKKFGSVLSDGSFNFLVLPSYLSQKELNYKPLDLNNHPVWTGKRPKEQTEISLFVGKFTK 66
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Match: A0A089N314_PETFA (Ribosomal protein L31 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N314_PETFA) HSP 1 Score: 77.8 bits (190), Expect = 1.360e-17 Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 22 KIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRPKQQTEISAFIGRLK 195 K+FG++LSDGS F+ L F SQ L K++D++ H +WTG+R K+QTEIS FIGRLK Sbjct: 4 KLFGNILSDGSLTFLTLPGFQSQKMLNTKKIDLLTHPIWTGKRVKEQTEISGFIGRLK 61 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7680.16617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7680.16617.1 >prot_L-elsbetiae_contig7680.16617.1 ID=prot_L-elsbetiae_contig7680.16617.1|Name=mRNA_L-elsbetiae_contig7680.16617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=67bp MNQSIQFKIFGSVLSDGSFRFMPLASFNSQYTLKVKRVDIINHSVWTGRRback to top mRNA from alignment at L-elsbetiae_contig7680:4899..5099+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7680.16617.1 ID=mRNA_L-elsbetiae_contig7680.16617.1|Name=mRNA_L-elsbetiae_contig7680.16617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=201bp|location=Sequence derived from alignment at L-elsbetiae_contig7680:4899..5099+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7680:4899..5099+ >mRNA_L-elsbetiae_contig7680.16617.1 ID=mRNA_L-elsbetiae_contig7680.16617.1|Name=mRNA_L-elsbetiae_contig7680.16617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=402bp|location=Sequence derived from alignment at L-elsbetiae_contig7680:4899..5099+ (Laminarionema elsbetiae ELsaHSoW15)back to top |