mRNA_L-elsbetiae_contig7680.16616.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A3G5FPL8_9PHAE (Ribosomal protein S10 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPL8_9PHAE) HSP 1 Score: 150 bits (378), Expect = 3.960e-45 Identity = 74/100 (74.00%), Postives = 87/100 (87.00%), Query Frame = 1 Query: 1 MSLKKKTYICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFR 300 M LK+KTYICEVWSSS DLKSLK+W LLLPLSR T LSTKIKRFTL+RSPLGNK+SKDQFER+EYRSYFSF+S+ K+L +L++LKYS+ V SK+ FR Sbjct: 1 MCLKQKTYICEVWSSSTDLKSLKLWLLLLPLSRPSTALSTKIKRFTLLRSPLGNKRSKDQFERREYRSYFSFKSKRPSKVLAVLEVLKYSNDVKSKIQFR 100
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A089MX90_PETFA (Ribosomal protein S10 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089MX90_PETFA) HSP 1 Score: 140 bits (352), Expect = 3.860e-41 Identity = 68/97 (70.10%), Postives = 83/97 (85.57%), Query Frame = 1 Query: 10 KKKTYICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFR 300 KK Y+C+VWS+S DLKSLK W LLLPL++ CTGLSTKIKRFTL+RSPLGNK +KDQFE+KEYRSY SF+S++ KIL +LDIL+YS+GV KVL + Sbjct: 6 KKTIYLCKVWSASTDLKSLKYWSLLLPLAKQCTGLSTKIKRFTLLRSPLGNKTAKDQFEKKEYRSYLSFKSKNPSKILALLDILRYSTGVKLKVLVK 102
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A2H4ZR19_9PHAE (Ribosomal protein S10 n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A2H4ZR19_9PHAE) HSP 1 Score: 134 bits (337), Expect = 7.210e-39 Identity = 65/99 (65.66%), Postives = 81/99 (81.82%), Query Frame = 1 Query: 4 SLKKKTYICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFR 300 ++K TY+C+VWSSS DLK+LK WFLLLPL + CTGLSTK KRFTL+RSPLGNK +KDQFERKEYRSYF +S D +IL L+IL++S+GV K+L + Sbjct: 4 TVKTHTYLCKVWSSSTDLKALKNWFLLLPLIKKCTGLSTKTKRFTLLRSPLGNKTAKDQFERKEYRSYFFLKSEDPSRILAFLNILRHSTGVKLKILIK 102
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A0U1V7T2_9PHAE (Ribosomal protein S10 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1V7T2_9PHAE) HSP 1 Score: 133 bits (334), Expect = 2.190e-38 Identity = 70/102 (68.63%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 1 MSLKKKT-YICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFRS 303 M KKK Y CEVWS+S DL SLK W LLLPL RS TGLSTKIKRFTL+RSPLGNK SKDQFER+EY+SYF +S + +IL +LDIL+YSSGV SK+L ++ Sbjct: 1 MHFKKKIIYSCEVWSTSTDLISLKYWSLLLPLFRSSTGLSTKIKRFTLLRSPLGNKASKDQFERREYKSYFFLKSENPSEILALLDILRYSSGVKSKILLKT 102
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A0U1V7C6_SCYLO (Ribosomal protein S10 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1V7C6_SCYLO) HSP 1 Score: 129 bits (324), Expect = 6.890e-37 Identity = 61/97 (62.89%), Postives = 78/97 (80.41%), Query Frame = 1 Query: 10 KKKTYICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFR 300 KK Y CE WS+S+DLK+LK W LLLPL+ SCTGLSTK KRFTL+RSPLGNK +KDQFER+EYR +F F+S+ ++L L +L+YSSG+ SKV+ + Sbjct: 5 KKTLYSCEFWSASIDLKNLKYWSLLLPLTESCTGLSTKTKRFTLLRSPLGNKAAKDQFERREYRRHFIFKSKSPSELLAFLSVLRYSSGIKSKVVLK 101
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A6N3IW20_9PHAE (Ribosomal protein S10 n=11 Tax=Lessoniaceae TaxID=35120 RepID=A0A6N3IW20_9PHAE) HSP 1 Score: 124 bits (312), Expect = 5.370e-35 Identity = 65/99 (65.66%), Postives = 77/99 (77.78%), Query Frame = 1 Query: 10 KKKTYICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFRSK 306 K TYIC+VWS S DLKSL LLLPL S TGLST+IKRFTL+RSPLGNK +KDQFER+EYRSYF+ +S++ KIL LDILKY +GV KV+ + K Sbjct: 6 KNITYICKVWSVSTDLKSLNFLLLLLPLFISSTGLSTRIKRFTLLRSPLGNKTAKDQFERREYRSYFTLKSQNPAKILAFLDILKYLNGVKFKVILQEK 104
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A6N3ISS5_9PHAE (Ribosomal protein S10 n=7 Tax=Ecklonia TaxID=105406 RepID=A0A6N3ISS5_9PHAE) HSP 1 Score: 124 bits (311), Expect = 7.620e-35 Identity = 63/95 (66.32%), Postives = 77/95 (81.05%), Query Frame = 1 Query: 22 YICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFRSK 306 YIC+VWS+S DLKSL LLLPL S TGLST+IKRFTL+RSPLGNK +KDQFER+EYRSYF+F+S++ KIL L+ILKY +GV KV+ + K Sbjct: 10 YICKVWSASTDLKSLNFLLLLLPLFISSTGLSTRIKRFTLLRSPLGNKTAKDQFERREYRSYFTFKSQNPAKILAFLEILKYLNGVKFKVILQEK 104
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A8F0FCY5_9PHAE (Ribosomal protein S10 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0FCY5_9PHAE) HSP 1 Score: 123 bits (308), Expect = 2.250e-34 Identity = 64/95 (67.37%), Postives = 74/95 (77.89%), Query Frame = 1 Query: 22 YICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFRSK 306 YIC+VWS S D KSL LLLPLS S TGLSTKIKRFTL+RSPLGNK +KDQFER+EYRSYF+ +SR KIL +DILKY +GV KV+ + K Sbjct: 10 YICKVWSVSTDFKSLNSLALLLPLSISSTGLSTKIKRFTLLRSPLGNKSAKDQFERREYRSYFTIKSRSPSKILAFIDILKYLNGVKFKVVLQEK 104
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A8F0K0F5_9PHAE (Ribosomal protein S10 n=1 Tax=Cymathaere triplicata TaxID=309354 RepID=A0A8F0K0F5_9PHAE) HSP 1 Score: 122 bits (306), Expect = 4.810e-34 Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 1 Query: 22 YICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFRSK 306 YIC+VWS S D KSL W LLLPLS S TGL+T+IKRFTL+RSPLGNK +KDQFER+EYRSYF+ +SR K+L + IL+Y +GV KV+ + K Sbjct: 10 YICKVWSGSTDFKSLNSWSLLLPLSISSTGLATRIKRFTLLRSPLGNKAAKDQFERREYRSYFTIKSRSPAKVLAFIGILRYLNGVKFKVILQEK 104
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Match: A0A4D6E534_9PHAE (Ribosomal protein S10 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E534_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.190e-33 Identity = 64/95 (67.37%), Postives = 73/95 (76.84%), Query Frame = 1 Query: 22 YICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSPLGNKKSKDQFERKEYRSYFSFESRDLPKILKMLDILKYSSGVISKVLFRSK 306 YIC+VWS S D KSL LLLPLS TGLSTKIKRFTL+RSPLGNK SKDQFER+EYRSYF+ +S+ KIL LDILKY +GV KV+ + K Sbjct: 19 YICKVWSVSTDFKSLNYLSLLLPLSIYSTGLSTKIKRFTLLRSPLGNKASKDQFERREYRSYFTIKSQSSSKILAFLDILKYLNGVKFKVVLQEK 113 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7680.16616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7680.16616.1 >prot_L-elsbetiae_contig7680.16616.1 ID=prot_L-elsbetiae_contig7680.16616.1|Name=mRNA_L-elsbetiae_contig7680.16616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=103bp MSLKKKTYICEVWSSSVDLKSLKIWFLLLPLSRSCTGLSTKIKRFTLIRSback to top mRNA from alignment at L-elsbetiae_contig7680:4356..4664+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7680.16616.1 ID=mRNA_L-elsbetiae_contig7680.16616.1|Name=mRNA_L-elsbetiae_contig7680.16616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=309bp|location=Sequence derived from alignment at L-elsbetiae_contig7680:4356..4664+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7680:4356..4664+ >mRNA_L-elsbetiae_contig7680.16616.1 ID=mRNA_L-elsbetiae_contig7680.16616.1|Name=mRNA_L-elsbetiae_contig7680.16616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=618bp|location=Sequence derived from alignment at L-elsbetiae_contig7680:4356..4664+ (Laminarionema elsbetiae ELsaHSoW15)back to top |