prot_L-elsbetiae_contig7679.16609.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7679.16609.1
Unique Nameprot_L-elsbetiae_contig7679.16609.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length112
Homology
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BLAST of mRNA_L-elsbetiae_contig7679.16609.1 vs. uniprot
Match: A0A6H5KX02_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX02_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.800e-6
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 0 
Query:   66 ASPSSGLDGTRGDMIKTASAAIAGVLASTAILPGEALAAAKPDPNRK 112
            ASP +GLDGTR D+I+TASAA+AG+L S+A+LP  ALAAAK +PNR+
Sbjct:   45 ASPRAGLDGTRRDVIQTASAAVAGLL-SSAVLPAGALAAAKAEPNRR 90
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7679.16609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KX02_9PHAE1.800e-668.09Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7679contigL-elsbetiae_contig7679:8011..8346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7679.16609.1mRNA_L-elsbetiae_contig7679.16609.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7679 8011..8347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7679.16609.1 ID=prot_L-elsbetiae_contig7679.16609.1|Name=mRNA_L-elsbetiae_contig7679.16609.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
AHYRPTDCSVSVWRNRPRFPASYLHICFSMRSHAFEVVLALGALAVGNGF
IGQVSSSSQSMLRMSASPSSGLDGTRGDMIKTASAAIAGVLASTAILPGE
ALAAAKPDPNRK
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