mRNA_L-elsbetiae_contig765.16577.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: D8LIE6_ECTSI (Conserved protein of fucose operon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIE6_ECTSI) HSP 1 Score: 267 bits (683), Expect = 5.220e-82 Identity = 136/165 (82.42%), Postives = 148/165 (89.70%), Query Frame = 1 Query: 1 MGLIGISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGVLGASEESAEHGPAVFRL 495 MGLIGISP+ISPDLLV LARMGHGD+ICFADANFPSE L +PG PGPIT+RADGHEV PLLRAVSKLFPLD+YT+ PV+MMA V GDELD SIE+RF AVEAEQPGMFKVERVERF FYERAR+CYAVV+TGETAKYGNIILVKGVLG S+ESA GPA+F L Sbjct: 1 MGLIGISPLISPDLLVTLARMGHGDSICFADANFPSEN-LTSPGKPGPITVRADGHEVAPLLRAVSKLFPLDTYTEFPVQMMAAVPGDELDASIEERFSTAVEAEQPGMFKVERVERFAFYERARSCYAVVSTGETAKYGNIILVKGVLGVSDESAGSGPAIFTL 164
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: UPI001B8F97EE (L-fucose mutarotase n=2 Tax=Carboxylicivirga TaxID=1628153 RepID=UPI001B8F97EE) HSP 1 Score: 160 bits (404), Expect = 3.170e-42 Identity = 85/144 (59.03%), Postives = 102/144 (70.83%), Query Frame = 1 Query: 13 GISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGV 444 GISP+ISP+LL LARMGHGD I FADA+FP E+ L A IRADG + LL A+ LF LD+Y P+ MMAPV GD+LDPS+E + +A+ P +ER+ERFDFYERARN +AVV TGETAKYGNI+L KGV Sbjct: 4 GISPLISPELLAVLARMGHGDEIVFADAHFPGES-LNAN------VIRADGLHIADLLAAILPLFELDAYVSAPIVMMAPVEGDDLDPSVETAYLEAIHQTNPHAPAIERIERFDFYERARNAFAVVMTGETAKYGNILLKKGV 140
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: F4LLA6_TREBD (D-ribose pyranase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) TaxID=906968 RepID=F4LLA6_TREBD) HSP 1 Score: 157 bits (396), Expect = 5.060e-41 Identity = 83/157 (52.87%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 7 LIGISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGVLGASEESAEHG 477 LIG+SP+ISPDLL L RMGHGD I ADA FP +TC IRADG + LL + +L LD+Y PV MMAPV GDELD S+E + ++ PG VER+ERF FYERA+ +AVV TGET KYGN+IL KGV+ S E + G Sbjct: 2 LIGVSPVISPDLLAVLHRMGHGDEIVLADAFFPGDTCSAR-------VIRADGIGIPRLLDGILRLMNLDAYVSSPVAMMAPVAGDELDMSVESAYRDVIDRRWPGTPPVERIERFAFYERAKTAFAVVVTGETVKYGNVILKKGVVPVSAEFRQQG 151
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: UPI0004789706 (L-fucose mutarotase n=1 Tax=Alkaliflexus imshenetskii TaxID=286730 RepID=UPI0004789706) HSP 1 Score: 153 bits (387), Expect = 7.350e-40 Identity = 84/144 (58.33%), Postives = 100/144 (69.44%), Query Frame = 1 Query: 13 GISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGV 444 GISPIISPDLL LARMGHGD I FADA+FP E+ +RADG + LL AV LF LDSY P+ MMA V GD LDP++E+++ KAV+ P + V+R+ERF FYER R+ +AVV TGETAKYGNIIL KGV Sbjct: 4 GISPIISPDLLQILARMGHGDEIVFADAHFPGESFNSR-------ILRADGIRIPDLLEAVLPLFELDSYVPNPLIMMAAVEGDVLDPAVEQQYLKAVQISNPNISSVKRIERFAFYERTRSAFAVVMTGETAKYGNIILKKGV 140
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: A0A651HIY1_9BACT (D-ribose pyranase n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A651HIY1_9BACT) HSP 1 Score: 153 bits (386), Expect = 9.790e-40 Identity = 79/147 (53.74%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 13 GISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGVLGA 453 GISP++SP+LL L RMGHGD + ADA+FP + + +RADG E+ PLL A+ LF LD Y P+ MMAPV GD LDP +E+R+ A+E QPG + R+ERF FYERAR +AV+ TGETAKYGN+IL KGV A Sbjct: 4 GISPLLSPELLALLHRMGHGDELVLADAHFPGHSIHRT-------VLRADGLEIAPLLDAILPLFELDGYVPDPLAMMAPVEGDTLDPEVERRYRAAIERHQPGAPAILRLERFAFYERARGAFAVLMTGETAKYGNLILKKGVTPA 143
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: A0A524J1J2_9CHLR (D-ribose pyranase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524J1J2_9CHLR) HSP 1 Score: 152 bits (385), Expect = 1.350e-39 Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 1 Query: 7 LIGISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGV 444 L+GISP++SP+LL L RMGHGD I ADA+FP E+C + +RADG +V LL A+ LF LD+Y D PV MM+PV GD LDP +E R+ AV+ P + ++ERF+FYER R + VV TGETAKYGNIIL KGV Sbjct: 2 LLGISPLMSPELLAILYRMGHGDEIVLADAHFPGESC-------NDLVVRADGLKVADLLDAILPLFALDTYVDSPVMMMSPVPGDALDPEVEARYRTAVDKVWPETPAIAQIERFEFYERTRKAFCVVMTGETAKYGNIILKKGV 140
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: A0A0K8R165_9BACT (D-ribose pyranase n=1 Tax=Bacteroidales bacterium 6E TaxID=1688776 RepID=A0A0K8R165_9BACT) HSP 1 Score: 152 bits (384), Expect = 1.790e-39 Identity = 82/145 (56.55%), Postives = 101/145 (69.66%), Query Frame = 1 Query: 13 GISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGVL 447 GISPIISP LL LARMGHGD I ADA+FP ET IRADG ++ LL A+ +LF LDSY PV MM V GD+LDP++E+ + K+++ P + VERVERF+FYER R+ +AVV TGETAKYGN+IL KGV+ Sbjct: 4 GISPIISPALLEILARMGHGDEIVLADAHFPGETFNTR-------VIRADGLKIPALLEAILQLFELDSYVPHPVAMMDAVPGDQLDPTVEQSYLKSIQLTHPKIQSVERVERFEFYERTRSAFAVVMTGETAKYGNVILKKGVI 141
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: A0A4U2LAJ6_9BACT (D-ribose pyranase n=1 Tax=Puteibacter caeruleilacunae TaxID=2528631 RepID=A0A4U2LAJ6_9BACT) HSP 1 Score: 152 bits (384), Expect = 1.910e-39 Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 1 Query: 13 GISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGVLGASE 459 GISP+ISP LL LARMGHGD I ADA+FP+E+ +RADG ++ LL+A+ LF LDSY + P+ MM V GDELDP +EK++ KAVE P + VER+ERF FY+RA++ +AVV TGET KYGNIIL KGV + E Sbjct: 4 GISPLISPKLLETLARMGHGDEIILADAHFPAESFNDN-------VLRADGIKIPDLLQAILPLFELDSYVENPLIMMQAVEGDELDPEVEKQYMKAVEQTNPQLTTVERIERFSFYDRAKSAFAVVMTGETVKYGNIILKKGVTPSFE 145
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: A0A847G0W7_9CHLR (D-ribose pyranase n=1 Tax=Leptolinea sp. TaxID=2699749 RepID=A0A847G0W7_9CHLR) HSP 1 Score: 152 bits (384), Expect = 1.970e-39 Identity = 80/152 (52.63%), Postives = 102/152 (67.11%), Query Frame = 1 Query: 7 LIGISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGVLGASEE 462 LIGISP+ISP+LL L RMGHGD I ADA+FP ET K +RADG + LL A+ LF LD+Y D P+ MMAPV GD+LDP +EK + KA++ P + R++RF+FYER ++ +AV+ TGET KYGNIIL KGV + E Sbjct: 2 LIGISPLISPELLAVLYRMGHGDEIVLADAHFPGETFGKQ-------VLRADGIRIPALLEAILPLFILDNYVDNPLIMMAPVAGDQLDPEVEKSYRKAIDKFWPQTPPIRRIDRFEFYERTKSSFAVLMTGETVKYGNIILKKGVTPINRE 146
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Match: A0A5R9QQ06_9BACT (D-ribose pyranase n=1 Tax=Labilibacter sediminis TaxID=2570926 RepID=A0A5R9QQ06_9BACT) HSP 1 Score: 152 bits (383), Expect = 2.540e-39 Identity = 78/144 (54.17%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 13 GISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITIRADGHEVTPLLRAVSKLFPLDSYTDCPVKMMAPVIGDELDPSIEKRFEKAVEAEQPGMFKVERVERFDFYERARNCYAVVATGETAKYGNIILVKGV 444 GISP+ISP+LL LARMGHGD I ADA+FP E+ + +RADG + LL A+ L+ LD Y P+ M+A V GDELDPS+EK + ++ P + +ER+ERFDFY+RARN +AVV TGETAKYGNI+L KGV Sbjct: 4 GISPLISPELLEVLARMGHGDEIILADAHFPGESFNER-------VLRADGLRIPDLLEAILPLYELDDYVPAPLVMLAAVEGDELDPSVEKAYLNSIHKTNPNVAPIERMERFDFYDRARNAFAVVMTGETAKYGNILLKKGV 140 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig765.16577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig765.16577.1 >prot_L-elsbetiae_contig765.16577.1 ID=prot_L-elsbetiae_contig765.16577.1|Name=mRNA_L-elsbetiae_contig765.16577.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp MGLIGISPIISPDLLVALARMGHGDTICFADANFPSETCLKAPGSPGPITback to top mRNA from alignment at L-elsbetiae_contig765:6307..9347+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig765.16577.1 ID=mRNA_L-elsbetiae_contig765.16577.1|Name=mRNA_L-elsbetiae_contig765.16577.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3041bp|location=Sequence derived from alignment at L-elsbetiae_contig765:6307..9347+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig765:6307..9347+ >mRNA_L-elsbetiae_contig765.16577.1 ID=mRNA_L-elsbetiae_contig765.16577.1|Name=mRNA_L-elsbetiae_contig765.16577.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig765:6307..9347+ (Laminarionema elsbetiae ELsaHSoW15)back to top |