mRNA_L-elsbetiae_contig7648.16575.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7648.16575.1
Unique NamemRNA_L-elsbetiae_contig7648.16575.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: D7FQY6_ECTSI (Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY6_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 5.060e-150
Identity = 247/448 (55.13%), Postives = 261/448 (58.26%), Query Frame = 1
Query:    7 EAKRTHLLEFWKQTMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKSLATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEFVKNGNPAKEVCRTCAGSELQACYNCDGQGSYKTYGVVVVCKVLS*ERLLSCVSYVVGQSCVCRVPLSLRNVCRRAIQKQYHSSFLSSNKSERVKKRRLLLLF*FS*TTVQSGGIPPKELDPTISGLSPTDYSSSNYCLLGKCEHSRRGLAPKG*LVLLPTRWSSCSCIFFCGNG*TRTYPALARHFNLGYSSGHIHCCHFLQGCKGSGNVLCRSCFKGDPWDIEAARAKAEEKRAASLLGFRKKSPPDAPNGILQ 1350
            EAKRTHL  FW+Q MGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAK GISVLGSKPLRSLAN+MSYTDKSLAT+DAVRVGRLHTMC+GWADASLQYM SGGFAVS+KVP+I  ETLVLWGRQDKILDP LYAERFVDEMP+ARLVWVEECGHVPHLEQPD TA AIV FVK+GNPAKEVC TC GSELQACYNCDG GSYKTYGVVV CK                                                                                                                                                                  C+GSGN+LCRSCFKGDPWDI+AAR +AEE+R   LLG R   P DAP+G LQ
Sbjct:   87 EAKRTHLKAFWQQAMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKLGISVLGSKPLRSLANQMSYTDKSLATEDAVRVGRLHTMCDGWADASLQYMSSGGFAVSTKVPSINQETLVLWGRQDKILDPKLYAERFVDEMPDARLVWVEECGHVPHLEQPDETAKAIVSFVKDGNPAKEVCGTCQGSELQACYNCDGLGSYKTYGVVVTCKA-----------------------------------------------------------------------------------------------------------------------------------------------------------------CRGSGNILCRSCFKGDPWDIKAARTRAEERRKDGLLGLRNPPPLDAPDGFLQ 373          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A0A835Z2G7_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2G7_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.560e-84
Identity = 144/239 (60.25%), Postives = 173/239 (72.38%), Query Frame = 1
Query:    7 EAKRTHLLEFWKQTMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKS-LATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEFVKNG----NPAKEVCRTCAGSELQACYNCDGQGSYKTYGVVVVCK 708
            EAKR HL  FW++ +GGRPMVL GASLGGAIA+DFA E+PEAV+KL+LID Q  IDGSGPGASLPGPLAK GI VLGSKPLR +ANKM+Y DK  LAT+DA+R+GRLHT+  GW  ASL YM SGGFAVS+++ ++   TLVLWGRQD+ILDP  YAER+   M +A LVWVE+CGHVPHLEQ  +TA  +  F          A++ C  C G+ LQ        G Y +YG  V C+
Sbjct:   85 EAKRQHLHAFWREVLGGRPMVLAGASLGGAIAVDFALEYPEAVEKLILIDGQALIDGSGPGASLPGPLAKLGIRVLGSKPLRMMANKMAYYDKKRLATEDAMRIGRLHTLQPGWEGASLSYMCSGGFAVSTRLGDVAAPTLVLWGRQDEILDPRAYAERYGALMRDASLVWVEDCGHVPHLEQAAVTARTVAGFAGASAAAXXXAEKPCAACGGAGLQRXXXXXXDGFYVSYGRRVECR 323          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A0A6H5JP01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP01_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 1.580e-80
Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 1
Query:   49 MGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKSLATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLV 513
            MGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLP PLAK GISVLGSKPLRSLAN+MSYTDKSLAT+DAVRVGRLHTMC+GWADASLQYM SGGFAVS+KV +I  ETLVLWGRQD+ILDP LYAER     PN RL+
Sbjct:    1 MGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPAPLAKLGISVLGSKPLRSLANQMSYTDKSLATEDAVRVGRLHTMCDGWADASLQYMSSGGFAVSTKVSSINQETLVLWGRQDRILDPKLYAER-----PNPRLL 150          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A0A7S2SHF8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHF8_9STRA)

HSP 1 Score: 248 bits (634), Expect = 4.820e-73
Identity = 120/196 (61.22%), Postives = 159/196 (81.12%), Query Frame = 1
Query:   10 AKRTHLLEFWKQTMG-GRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDK-SLATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEFVK 591
            AKR HL  F  Q +G  RP+VL+GASLGGA+A++FA  +P+ V K VLID QGF+DG+GP ASLP  LA+ G+ VLGS  LRS+AN+M+Y+DK + AT+DA+++GRLH +CEGW DA+L+YM SGGF  S KVP ++ +TLVLWGR D+ILDP LYAERF++E+PN+RL +V+ CGHVPHLEQP +TA+ IV+F++
Sbjct:  169 AKREHLKAFVDQVVGTDRPVVLMGASLGGALAIEFAAAYPDTVAKTVLIDPQGFVDGAGPAASLPRFLARLGVRVLGSPQLRSMANQMAYSDKETFATEDAMKIGRLHVLCEGWEDANLEYMCSGGFQPSLKVPEVKCQTLVLWGRDDEILDPALYAERFLEEVPNSRLQFVDNCGHVPHLEQPKVTASHIVDFLR 364          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A0A454XZB8_OSTTA (Alpha/Beta hydrolase protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XZB8_OSTTA)

HSP 1 Score: 244 bits (622), Expect = 1.890e-71
Identity = 120/206 (58.25%), Postives = 153/206 (74.27%), Query Frame = 1
Query:    1 NPEAKRTHLLEFWKQTMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKSL-ATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEFVKNGNPAKEV 615
            +PEAKR HL  FWK+ +  RPMVL GASLGGA A+DFA   PEAV+KLVLIDAQGFI+G GP  +LP P+AK G++VL + PLRS AN+++Y DK+  ATDDA+RVGRLHT    W DA+L +M SGGF V + +P +  ETLV+WGR D IL+P+ YA++F+ E+PNAR+VWVE CGHV HLEQPD     + +FV +    + V
Sbjct:  146 SPEAKRAHLYAFWKENVK-RPMVLCGASLGGAAAIDFATNHPEAVEKLVLIDAQGFIEGLGPMGALPRPIAKVGVNVLRTVPLRSAANQLAYYDKATYATDDALRVGRLHTFAPQWCDATLSFMKSGGFKVRNSIPKVPVETLVVWGRDDNILEPS-YADKFMSELPNARMVWVENCGHVAHLEQPDFLCETLFDFVGSAKETERV 349          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A0A7S0WHR5_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WHR5_9CHLO)

HSP 1 Score: 241 bits (614), Expect = 9.800e-71
Identity = 118/200 (59.00%), Postives = 152/200 (76.00%), Query Frame = 1
Query:    1 NPEAKRTHLLEFWKQTMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKSL-ATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEFVKNG 597
            +PEAKR HL  FWK  +G RPMVL GASLGGA A+DFA   PEAV+KLVL+DAQGFI+G GP  +LP P+AK G++VL +  LR+ AN+M+Y DK+  AT+DA+RVGRLHT    W DA+L +M SGGF V + +  +  ETLV+WGR+DKIL+P+ YA +F++E+PNA+LVWVE+CGHV HLEQPD     ++EF   G
Sbjct:  112 SPEAKRAHLYAFWKANVG-RPMVLCGASLGGAAAIDFATNHPEAVEKLVLVDAQGFIEGLGPMGALPRPIAKVGVNVLKTVALRNAANQMAYYDKNTYATEDALRVGRLHTFAPQWCDATLSFMQSGGFKVRNSIAKVPMETLVMWGREDKILEPS-YAAKFMEELPNAKLVWVEKCGHVAHLEQPDFMCKTLLEFAGEG 309          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A4S2H9_OSTLU (AB hydrolase-1 domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S2H9_OSTLU)

HSP 1 Score: 240 bits (613), Expect = 3.610e-70
Identity = 119/196 (60.71%), Postives = 150/196 (76.53%), Query Frame = 1
Query:    1 NPEAKRTHLLEFWKQTMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKS-LATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEF 585
            +PEAKR HL  FWK  +G RPMVL GASLGGA A+DFA   PEAV+KLVLIDAQGFI+G GP  +LP P+AK G+++L +  LR+ AN+M+Y DK+  ATDDA+RVGRLHT    W DA+L +M SGGF V + +  +  ETLVLWGR+DKIL+P+ YAE+F+ E+PNARLVWVE+CGHV HLEQP+     + +F
Sbjct:  146 SPEAKRAHLYAFWKANVG-RPMVLCGASLGGAAAIDFATNHPEAVEKLVLIDAQGFIEGLGPMGALPRPVAKMGVNILRTTALRNAANQMAYYDKATFATDDALRVGRLHTFAPQWCDATLSFMQSGGFKVRNSIAKVPMETLVLWGREDKILEPS-YAEKFMKELPNARLVWVEKCGHVAHLEQPEFMCQTLWDF 339          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A0A383WAW1_TETOB (AB hydrolase-1 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WAW1_TETOB)

HSP 1 Score: 238 bits (607), Expect = 2.570e-69
Identity = 121/221 (54.75%), Postives = 161/221 (72.85%), Query Frame = 1
Query:    1 NPEAKRTHLLEFWKQTMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKSLATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEFVKNGNPAKE-----VCRTCAGSELQA 648
            +P+ KR HL  FW+Q +  RPMVLVG+SLGGAIALDFA E+P+AV+KLVLIDAQGFI+G GP ASLP PLA  G+ VL ++ LR  AN+M+Y D++ AT DA+RVGRLHT   GW+DA++ +M SGG+ +S+++P ++   LVLWGRQD+IL+P  YA  F + +PNA L WVEECGH  HLEQP +TA +I+ F+   +  ++     V    AGS + A
Sbjct:  123 SPQQKREHLFSFWQQHIQ-RPMVLVGSSLGGAIALDFALEYPQAVEKLVLIDAQGFIEGIGPMASLPRPLAAAGVWVLRTEQLRMAANRMAYHDQAFATPDAMRVGRLHTHLAGWSDANIAFMRSGGYRISTRIPQVQQPALVLWGRQDQILEPK-YAAMFEEALPNATLQWVEECGHCAHLEQPAVTAASILAFIDGTDAPQQQQQSTVAGVAAGSSVAA 341          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A0A7J7PYY1_9CHLO (Alpha/Beta hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PYY1_9CHLO)

HSP 1 Score: 238 bits (608), Expect = 4.410e-69
Identity = 120/216 (55.56%), Postives = 162/216 (75.00%), Query Frame = 1
Query:    1 NPEAKRTHLLEFWKQTMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKSLATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEFVKNGNPAKEVCRTCAGSELQA 648
            +P+ KR HL  FW++ +  RPMVLVG+SLGGAIALDFA E+P+AV+KLVLIDAQGFI+G GP ASLP P+A  G+ VL S+ LR  AN+M+Y D++ AT DA+RVGRLHT   GWADA++ +M SGG+ +S+++  ++   LVLWGRQD+IL+P  YA  F + +PNA L WVEECGH  HLEQP +TA +I+ F+ +G  A +  R  AG+ +++
Sbjct:  155 SPQQKREHLFSFWREHIQ-RPMVLVGSSLGGAIALDFALEYPQAVEKLVLIDAQGFIEGIGPMASLPRPVAAAGVWVLRSEQLRMAANRMAYHDQAFATLDAMRVGRLHTNLPGWADANIAFMRSGGYRISTRIRQVQQPALVLWGRQDQILEPK-YAAMFEEALPNATLQWVEECGHCAHLEQPTITAASILAFI-DGTDAPQQQRAAAGAAVES 367          
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Match: A0A061RCB7_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RCB7_9CHLO)

HSP 1 Score: 236 bits (603), Expect = 2.660e-68
Identity = 118/195 (60.51%), Postives = 147/195 (75.38%), Query Frame = 1
Query:    4 PEAKRTHLLEFWKQTMGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASLPGPLAKFGISVLGSKPLRSLANKMSYTDKS-LATDDAVRVGRLHTMCEGWADASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMPNARLVWVEECGHVPHLEQPDLTATAIVEF 585
            P+ KR HL  +WKQ +G RPMVLVGASLGGA A+DFA E PEAV KLVL+DAQGFIDG GP ASLP PLA  G+ VL S PLR  ANKM+Y +K   AT+DA+RVGRLHT   GW DA+  +M SGG++++ K+  +  ETL+LWGR D+ILDP  YA +F++ +P +RLVWVEECGH  HLE+P+  A  ++EF
Sbjct:  185 PKEKRAHLYAWWKQYVG-RPMVLVGASLGGAAAIDFAVEHPEAVHKLVLVDAQGFIDGIGPMASLPKPLAVLGVRVLRSIPLRQAANKMAYYNKERFATEDAMRVGRLHTFMPGWTDANCAFMRSGGYSIADKISKVGQETLILWGRNDEILDPK-YASQFLEAIPRSRLVWVEECGHCAHLEKPEFMAEQVLEF 377          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7648.16575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQY6_ECTSI5.060e-15055.13Predicted hydrolase/acyltransferase (alpha/beta hy... [more]
A0A835Z2G7_9STRA1.560e-8460.25Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A6H5JP01_9PHAE1.580e-8087.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SHF8_9STRA4.820e-7361.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A454XZB8_OSTTA1.890e-7158.25Alpha/Beta hydrolase protein n=2 Tax=Ostreococcus ... [more]
A0A7S0WHR5_9CHLO9.800e-7159.00Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A4S2H9_OSTLU3.610e-7060.71AB hydrolase-1 domain-containing protein n=2 Tax=O... [more]
A0A383WAW1_TETOB2.570e-6954.75AB hydrolase-1 domain-containing protein n=1 Tax=T... [more]
A0A7J7PYY1_9CHLO4.410e-6955.56Alpha/Beta hydrolase protein n=1 Tax=Scenedesmus s... [more]
A0A061RCB7_9CHLO2.660e-6860.51AB hydrolase-1 domain-containing protein n=1 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7648contigL-elsbetiae_contig7648:816..3764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score413.7
Seed ortholog evalue5.5e-113
Seed eggNOG ortholog2880.D7FQY6
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0016787
EggNOG free text desc.regulation of endocannabinoid signaling pathway
EggNOG OGsCOG0596@1,KOG1454@2759
Ec32 ortholog descriptionPredicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
Ec32 orthologEc-09_003270.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1916
Cds size672
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816849.6871104-UTR-L-elsbetiae_contig7648:815..8631622816849.6871104-UTR-L-elsbetiae_contig7648:815..863Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7648 816..863 +
1691683860.0535936-UTR-L-elsbetiae_contig7648:815..8631691683860.0535936-UTR-L-elsbetiae_contig7648:815..863Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7648 816..863 +
1622816849.7510514-UTR-L-elsbetiae_contig7648:2568..37641622816849.7510514-UTR-L-elsbetiae_contig7648:2568..3764Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7648 2569..3764 +
1691683860.1291347-UTR-L-elsbetiae_contig7648:2568..37641691683860.1291347-UTR-L-elsbetiae_contig7648:2568..3764Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7648 2569..3764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816849.6977704-CDS-L-elsbetiae_contig7648:863..10581622816849.6977704-CDS-L-elsbetiae_contig7648:863..1058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 864..1058 +
1691683860.071531-CDS-L-elsbetiae_contig7648:863..10581691683860.071531-CDS-L-elsbetiae_contig7648:863..1058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 864..1058 +
1622816849.708224-CDS-L-elsbetiae_contig7648:1216..12741622816849.708224-CDS-L-elsbetiae_contig7648:1216..1274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 1217..1274 +
1691683860.0830703-CDS-L-elsbetiae_contig7648:1216..12741691683860.0830703-CDS-L-elsbetiae_contig7648:1216..1274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 1217..1274 +
1622816849.7204762-CDS-L-elsbetiae_contig7648:1497..16751622816849.7204762-CDS-L-elsbetiae_contig7648:1497..1675Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 1498..1675 +
1691683860.0937674-CDS-L-elsbetiae_contig7648:1497..16751691683860.0937674-CDS-L-elsbetiae_contig7648:1497..1675Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 1498..1675 +
1622816849.731326-CDS-L-elsbetiae_contig7648:1888..20181622816849.731326-CDS-L-elsbetiae_contig7648:1888..2018Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 1889..2018 +
1691683860.1044-CDS-L-elsbetiae_contig7648:1888..20181691683860.1044-CDS-L-elsbetiae_contig7648:1888..2018Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 1889..2018 +
1622816849.7409787-CDS-L-elsbetiae_contig7648:2457..25681622816849.7409787-CDS-L-elsbetiae_contig7648:2457..2568Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 2458..2568 +
1691683860.1143954-CDS-L-elsbetiae_contig7648:2457..25681691683860.1143954-CDS-L-elsbetiae_contig7648:2457..2568Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7648 2458..2568 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7648.16575.1prot_L-elsbetiae_contig7648.16575.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7648 864..2568 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7648.16575.1

>prot_L-elsbetiae_contig7648.16575.1 ID=prot_L-elsbetiae_contig7648.16575.1|Name=mRNA_L-elsbetiae_contig7648.16575.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp
MGGRPMVLVGASLGGAIALDFAHEFPEAVKKLVLIDAQGFIDGSGPGASL
PGPLAKFGISVLGSKPLRSLANKMSYTDKSLATDDAVRVGRLHTMCEGWA
DASLQYMGSGGFAVSSKVPNIETETLVLWGRQDKILDPNLYAERFVDEMP
NARLVWVEECGHVPHLEQPDLTATAIVEFVKNGNPAKEVCRTCAGSELQA
CYNCDGQGSYKTYGVVVVCKVLS*
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mRNA from alignment at L-elsbetiae_contig7648:816..3764+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7648.16575.1 ID=mRNA_L-elsbetiae_contig7648.16575.1|Name=mRNA_L-elsbetiae_contig7648.16575.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2949bp|location=Sequence derived from alignment at L-elsbetiae_contig7648:816..3764+ (Laminarionema elsbetiae ELsaHSoW15)
AATCCAGAGGCAAAACGAACGCACCTGTTGGAATTCTGGAAGCAAACCAT GGGCGGGAGACCTATGGTGCTGGTGGGGGCTTCTCTTGGAGGGGCAATAG CGCTTGATTTTGCACACGAGTTCCCCGAAGCTGTCAAGAAGCTGGTGTTG ATCGATGCCCAAGGTTTCATCGATGGGAGTGGGCCTGGAGCATCCCTCCC GGGCCCTCTTGCCAAGTTTGGTATTTCTGTTCTGGGAAGCAAGGTGAGGG ACACGGGGGGGGGGGGGTCCCTTGTGGCGTGCTTGATTTAACAGAGCCTA CATTGGATTGCCGTGTGCTAGGTTGAATAAACCGCGTGTCCTTATGTACT CGCACAACCTTCACCTCGCCCCCAAACGTGTGATGCCAATCACGTGCGCA GCCGCTGCGCTCGCTTGCGAACAAGATGAGCTACACCGACAAGAGCTTGG CAACTGACGGTAAGCAATCGCTGGTAAACGAGGAAAGTCGGTCGCTTAAG TTGATACCGGAGCGTCGTTTTTGCGGGCGTCGTACTTGCCAAGGCAACCG ATACACTCGTCTACTCCCGCTAAGGCTGTCACGGTACTGAAACCCTGCGA AAATTGTCTCTTGAATTTTATAGTTGCCTGGAAGACGGACGGGCTGATTT TGCTCGTTTCGCAATGTGTTGTCCTTGTACAGATGCTGTCCGTGTAGGCA GGCTTCATACGATGTGCGAAGGCTGGGCCGATGCGAGTCTGCAGTACATG GGGAGTGGGGGATTCGCTGTCAGCTCAAAAGTGCCGAATATCGAAACAGA GACGCTAGTTCTGTGGGGCCGCCAGGACAAAATTCTGGACCCCAACCTCT ACGCGGAGAGGTGGGCGTCGAACTGACTCAAAATCGACAGCTGCTGAACC GTGCTTTGTATAGAAATATCACACAGCAGGTTCAGCAAGATAACACTATT TAGTACTGTTTACAGGGTGTGTGACGTGTTAGCGGAGCAACGCACACTTA ATCGTGCGTTTCAGCCGCCAGAGACCACTCACGGTGTATTTTATGCGTCT CTCCTCTCTCGCGACTTGGGCAGGTTTGTGGATGAAATGCCAAACGCCCG CCTCGTGTGGGTGGAGGAGTGCGGACACGTCCCTCACCTGGAGCAGCCTG ACCTGACTGCTACGGCCATTGTCGAGTTTGTCAAGAACGGGAACCCGGCA AAGGTGTCTATGATCTGCAGTGCTGGAAGAGAAGACACCGGTCTCTGTCG AAAAAAACGCCGCTCTTAATGTCTTTCCCCAGTAGAGGAAGGCGTATACC TGTTTCAATGCCCGTGGCATCGGATGCTTTAATATTGCAACAATGAGCAC TGAAGCCTGAGACTCATCGCCAAATTAAGGCATTTCACCGGCTGTGCGGC TATGATGATACACCATGACATCGCTTTTCCACCCTTCCGACGTACCGGCA CCAACCCGCATTGCAATCGTAGCAGGCCAAAGCAGCCCGCTCGTGATCTA CAAACACAACGACGGTGATCATGCAACAAAGAGCGGAGGCACCTGATGAC TGACATTATTAGCGCACAAGCAACACCCGACGAGAGATCGAAATCCAAGA CCATGACAACACGCACCCGTTGTATCTCCCTGGCTTCGACAGGAAGTTTG CCGTACTTGCGCAGGATCAGAGCTCCAAGCTTGTTACAACTGCGACGGAC AGGGCAGTTATAAAACATATGGCGTGGTCGTGGTCTGCAAGGTACTATCA TAGGAGCGCTTGTTGTCTTGTGTCTCGTATGTAGTTGGGCAGTCTTGTGT CTGTCGTGTTCCCTTGTCATTGCGAAATGTGTGCCGACGCGCGATCCAGA AACAGTACCATAGTAGCTTTTTGTCGTCGAACAAAAGCGAACGTGTCAAA AAGCGGAGGCTGTTGTTGCTGTTTTAGTTTAGTTGAACAACCGTCCAGTC TGGTGGCATACCGCCAAAGGAGCTTGACCCGACAATCTCTGGACTCTCCC CAACCGATTACAGTAGTTCGAACTACTGCCTCTTGGGTAAATGTGAACAC TCCCGACGGGGCTTAGCACCAAAAGGCTGATTGGTACTGCTACCGACAAG GTGGAGCTCATGCTCGTGTATTTTTTTCTGCGGCAATGGGTAAACCCGTA CTTATCCGGCGTTAGCTCGTCATTTCAACCTTGGATATTCATCAGGGCAC ATACACTGCTGTCATTTTTTACAGGGCTGCAAAGGGTCCGGAAACGTCCT GTGTCGATCATGCTTTAAGGGCGATCCATGGGATATTGAGGCTGCGCGGG CAAAAGCTGAAGAGAAGAGGGCCGCGAGTCTGTTGGGCTTCAGAAAAAAG AGCCCACCAGATGCACCAAACGGAATTTTACAGTAGAGAGGCGTCGCCGG GGAGGGCGTTTGTGTCTGATCTTGAGCAAAGTTGTGTTTTCCCCTTGAAT TGGGCAGCCAGAGCTTTTTGTGTCCCACCAGATGCACCAGACGGAATTTT ACAGTAGAGAGGCGTCGCCGGGGAGGGCGTTTGTGTCCGATCTTGAGCAA AGTTGTGTTTTCCCCTTGAATTGGGCAGCCAGAGCTTTTTGTGTCCGTTT GTACGGGTCAAAACCTCCCCAAAGCAGGCAGTGAGTGCGATCGATTTTTG GTTGGTGCTGTTCTGTGGGCTCAACCAGCTTGCGATGTAACTCGCTTCTG ACGCCGTTTCGTTTTTGTTTGTACAGTAGGGCGTATCGAAAAAGATTGCT GATCAAGACCTCAGCATCAGGAAGAAGACTTCCAGCGTTGGACTTGTACA GAAGTGGCTTCGCAAGATGCGAAAGACCAGGCCAACCCTGATTTGTCCGC ATTCACCAATAACTTAATTTCCCGTATTAGCAATCCATTACATCGGTGCA AGTAGGGTGGTGCAGGACGTTTCGAAGGTGCATGAGATCAGGTTCCGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7648:816..3764+

>mRNA_L-elsbetiae_contig7648.16575.1 ID=mRNA_L-elsbetiae_contig7648.16575.1|Name=mRNA_L-elsbetiae_contig7648.16575.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1344bp|location=Sequence derived from alignment at L-elsbetiae_contig7648:816..3764+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGGGAGACCTATGGTGCTGGTGGGGGCTTCTCTTGGAGGGGCAAT
AGCGCTTGATTTTGCACACGAGTTCCCCGAAGCTGTCAAGAAGCTGGTGT
TGATCGATGCCCAAGGTTTCATCGATGGGAGTGGGCCTGGAGCATCCCTC
CCGGGCCCTCTTGCCAAGTTTGGTATTTCTGTTCTGGGAAGCAAGATGGG
CGGGAGACCTATGGTGCTGGTGGGGGCTTCTCTTGGAGGGGCAATAGCGC
TTGATTTTGCACACGAGTTCCCCGAAGCTGTCAAGAAGCTGGTGTTGATC
GATGCCCAAGGTTTCATCGATGGGAGTGGGCCTGGAGCATCCCTCCCGGG
CCCTCTTGCCAAGTTTGGTATTTCTGTTCTGGGAAGCAAGCCGCTGCGCT
CGCTTGCGAACAAGATGAGCTACACCGACAAGAGCTTGGCAACTGACGCC
GCTGCGCTCGCTTGCGAACAAGATGAGCTACACCGACAAGAGCTTGGCAA
CTGACGATGCTGTCCGTGTAGGCAGGCTTCATACGATGTGCGAAGGCTGG
GCCGATGCGAGTCTGCAGTACATGGGGAGTGGGGGATTCGCTGTCAGCTC
AAAAGTGCCGAATATCGAAACAGAGACGCTAGTTCTGTGGGGCCGCCAGG
ACAAAATTCTGGACCCCAACCTCTACGCGGAGAGATGCTGTCCGTGTAGG
CAGGCTTCATACGATGTGCGAAGGCTGGGCCGATGCGAGTCTGCAGTACA
TGGGGAGTGGGGGATTCGCTGTCAGCTCAAAAGTGCCGAATATCGAAACA
GAGACGCTAGTTCTGTGGGGCCGCCAGGACAAAATTCTGGACCCCAACCT
CTACGCGGAGAGGTTTGTGGATGAAATGCCAAACGCCCGCCTCGTGTGGG
TGGAGGAGTGCGGACACGTCCCTCACCTGGAGCAGCCTGACCTGACTGCT
ACGGCCATTGTCGAGTTTGTCAAGAACGGGAACCCGGCAAAGGTTTGTGG
ATGAAATGCCAAACGCCCGCCTCGTGTGGGTGGAGGAGTGCGGACACGTC
CCTCACCTGGAGCAGCCTGACCTGACTGCTACGGCCATTGTCGAGTTTGT
CAAGAACGGGAACCCGGCAAAGGAAGTTTGCCGTACTTGCGCAGGATCAG
AGCTCCAAGCTTGTTACAACTGCGACGGACAGGGCAGTTATAAAACATAT
GGCGTGGTCGTGGTCTGCAAGGTACTATCATAGGAAGTTTGCCGTACTTG
CGCAGGATCAGAGCTCCAAGCTTGTTACAACTGCGACGGACAGGGCAGTT
ATAAAACATATGGCGTGGTCGTGGTCTGCAAGGTACTATCATAG
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