prot_L-elsbetiae_contig7620.16543.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7620.16543.1
Unique Nameprot_L-elsbetiae_contig7620.16543.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length91
Homology
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BLAST of mRNA_L-elsbetiae_contig7620.16543.1 vs. uniprot
Match: A0A6H5K3H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H5_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 3.430e-24
Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 0 
Query:    4 QVRALLENVEVKGGVLDCCGATNDAVRTVLTANGLRVATNDLDSRLIADTHLDAATNTFVDAYSEDSRRPNWVVSSPSYKNAFGIL 89
            +V ALL NV++ GGVLD CG+ +DA++ VL A+ L V+TND + RL ADTHLDA +  F   +S + +RP+W+V+SP Y NAF IL
Sbjct:   14 KVDALLLNVKLAGGVLDACGSASDAIKVVLEAHSLNVSTNDFNPRLTADTHLDATSEEFTAMFSTEGQRPDWIVTSPPYGNAFSIL 99
[Close]
BLAST of mRNA_L-elsbetiae_contig7620.16543.1 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.590e-12
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 0 
Query:    5 VRALLENVEVKGGVLDCCGATNDAVRTVLTANGLRVATNDLDSRLIADTHLDAATNTFVDAY--SEDSRRPNWVVSSPSYKNAFGILK 90
            V ALL  V + G +LD CG   DAV T L      V TND+ S   ADT+LDA+  +F D +  +   +RP+WVV+SPSYK+A   +K
Sbjct:  103 VEALLGAVSITGCILDVCGGPTDAVATRLGPT-CEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRPDWVVTSPSYKSALTFVK 189
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7620.16543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3H5_9PHAE3.430e-2453.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD58_9PHAE3.590e-1245.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7620contigL-elsbetiae_contig7620:3531..3977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7620.16543.1mRNA_L-elsbetiae_contig7620.16543.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7620 3531..3977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7620.16543.1 ID=prot_L-elsbetiae_contig7620.16543.1|Name=mRNA_L-elsbetiae_contig7620.16543.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=91bp
MRFQVRALLENVEVKGGVLDCCGATNDAVRTVLTANGLRVATNDLDSRLI
ADTHLDAATNTFVDAYSEDSRRPNWVVSSPSYKNAFGILKQ
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