mRNA_L-elsbetiae_contig7617.16539.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7617.16539.1 vs. uniprot
Match: D7G3A2_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A2_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.370e-33 Identity = 74/143 (51.75%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 4 LGTAKQQCYGHRGGDIFPYDTITNVITPQFTFYGKKKPTTSQNRALARLFSPRENALPFIYDNFDCARRWHRLPARAHQDLDFSDFFDTETMKSGPKGSAAS-YIRGEKARPRARTLTSSGRYSHRSLDFAPPAAAQAYFLFR 429 + T C GHRG DIFPYD +T+VITPQFTFYGKK P T +NR L +LF P ENALPFIYDNF+ W + DFSDFFDT TMKSGPKG+AAS + E R L G H F PP A + + R Sbjct: 472 ISTRSDTCNGHRGSDIFPYDIMTDVITPQFTFYGKKAPNTMKNRMLIKLFDPSENALPFIYDNFE----WSHCSEMGY---DFSDFFDTSTMKSGPKGTAASDEEKSESTRVEGFGLFKQGDI-HLQPGFDPPVAVKKILVER 606
BLAST of mRNA_L-elsbetiae_contig7617.16539.1 vs. uniprot
Match: A0A6H5K0B2_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0B2_9PHAE) HSP 1 Score: 131 bits (330), Expect = 1.280e-32 Identity = 71/140 (50.71%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 4 LGTAKQQCYGHRGGDIFPYDTITNVITPQFTFYGKKKPTTSQNRALARLFSPRENALPFIYDNFDCARRWHRLPARAHQDLDFSDFFDTETMKSGPKGSAASYIRGEKARPRARTLTSSGRYS----HRSLDFAPPAAAQ 411 + T C GHRG DIFPY +++VITPQFTFYGKK P T QNR L +LF P ENALPFIYDNF+ W + DFSDFFDT TMKSGPKG+AAS E+ + + + G + H F PPAA + Sbjct: 637 ISTRSDTCNGHRGSDIFPYGIMSDVITPQFTFYGKKAPNTMQNRMLIKLFDPSENALPFIYDNFE----WSHCSEMGY---DFSDFFDTSTMKSGPKGTAAS----EEEKSKTTRVEGFGLFEKGDIHLQPGFDPPAAVK 765
BLAST of mRNA_L-elsbetiae_contig7617.16539.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 5.880e-7 Identity = 39/115 (33.91%), Postives = 53/115 (46.09%), Query Frame = 1 Query: 16 KQQCYGHRGGDIFPYDTITNVITPQFTFYG-KKKP----TTSQNRALARLFSPRENALPFIYDNFDCARRWHRLPARAHQDLDFSDFF----DTETMKS-GPKGSAASYIRGEKA 330 ++C GHRG D+FP+D + N + G K P T NR + F PR NALP++YD F+ A A D D + D E + GP G A S +G +A Sbjct: 623 SEECLGHRGSDVFPFDILANEVNDFTVQTGIKGSPLGGGNTMTNREVLAAFDPRINALPYVYDTFEWAHC-------AEDGFDLRDAWLAKGDEEASRGEGPGGQAMSAKKGPRA 730 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7617.16539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7617.16539.1 >prot_L-elsbetiae_contig7617.16539.1 ID=prot_L-elsbetiae_contig7617.16539.1|Name=mRNA_L-elsbetiae_contig7617.16539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp FLGTAKQQCYGHRGGDIFPYDTITNVITPQFTFYGKKKPTTSQNRALARLback to top mRNA from alignment at L-elsbetiae_contig7617:1935..2752- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7617.16539.1 ID=mRNA_L-elsbetiae_contig7617.16539.1|Name=mRNA_L-elsbetiae_contig7617.16539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=818bp|location=Sequence derived from alignment at L-elsbetiae_contig7617:1935..2752- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7617:1935..2752- >mRNA_L-elsbetiae_contig7617.16539.1 ID=mRNA_L-elsbetiae_contig7617.16539.1|Name=mRNA_L-elsbetiae_contig7617.16539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=864bp|location=Sequence derived from alignment at L-elsbetiae_contig7617:1935..2752- (Laminarionema elsbetiae ELsaHSoW15)back to top |