prot_L-elsbetiae_contig7614.16536.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7614.16536.1
Unique Nameprot_L-elsbetiae_contig7614.16536.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length562
Homology
BLAST of mRNA_L-elsbetiae_contig7614.16536.1 vs. uniprot
Match: A0A6H5KQB6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQB6_9PHAE)

HSP 1 Score: 635 bits (1638), Expect = 5.630e-214
Identity = 367/584 (62.84%), Postives = 421/584 (72.09%), Query Frame = 0
Query:    1 MGDAPSCTAPGEDGGDXXXXXXXXXXXVVCSGWTWSCASGRRRDIPISSMHPCEITHPSEPPSQA--GDNXXXXXXXX-----AQAIPRMNV--SENCVPSSFGIGMMFITVAAQGGLDTSFSVMASFVGKHIVLVSGVPQHAVTSPMIPCGSATQTSSGPCSATYETSSVMQEAMFTFRADANSDAALTGFSLSLLPEC-PTPCGGEAPCPSGCPDRPAKVYVKSCLEGLCQPGDRFPSMGNSDKEFEVSTARGSIFIADAPGSASEGVFCVDSLRLGHQGSCIFYIAVTAGGADDPPMELTAMADIPHGVSLVVPCVGDDSLPDGVIVAPTHRLPRSGMKLYELCAKEGADFQVSVESCRGEPELFVGET-------STAQGDD--WEYNSNGAMICTNLPPPQSTGKRRCVPPPGGFPQKDVSLIVKATDLPGGA---GARTYFVGVGMRRGQRAEDQEHLLRVNLVGEGGVRTSPALMVKTLPSVPANVPSRAAVGGGEATVEWGGSLLYTPKLSGRHAHESELRDCGFYCSFEVFAVPKRLRGDFRQTPCGLESLQNRYKTDVVYSFVGTPKVAGEVTR 562
            MG  PSC AP E+GG+XXXXXXXXXXX VCSGWTWSC SG RR+IPIS +HPC++         A  GD XXXXXXXX      + +P  NV  S+ C PSSFG+GMMF+TV AQGG+D SFSVMAS VGKH+ LV+GVPQHAVTSPM+PCG A QT  GPCSA YETSSVMQEA+F F+  A S AA TGFSLSL+PEC P  CGG   C SGCP RPAKVYVKSC E  C P DRFPS G+ DKEFEVS+A GS+FIAD  GSA +GVFCV S      G C++YIAVTAGGAD+P M+LTA AD+P GVSLVVPC+GD SLPDG+IV P +R+P SGMKLYELC+K   DFQVSVESCRGE ELFV +        S   G+   + Y S+G M+CT     Q T   +C  P G    K+VS+ V+A     G     + TYFVGVGMR GQRAEDQEHLLRV ++GE GV  SP+L  K LPS   +  SRA VGG EATVEWGG+ L+TPKLSGRH HE+E RDCG YCS+EV+AVP RL+G+F  T CGLESL NR K DVVY FVG  K  GEVT+
Sbjct:  403 MGATPSCAAP-EEGGEXXXXXXXXXXXXVCSGWTWSCTSGGRRNIPISHLHPCDVLDEQHQGDSAEGGDXXXXXXXXXXXXXXGEGVPTSNVEVSDKCAPSSFGVGMMFMTVVAQGGMDASFSVMASLVGKHVTLVTGVPQHAVTSPMVPCGEAKQTEQGPCSAEYETSSVMQEALFVFKVGAGSVAATTGFSLSLVPECAPGSCGGPT-CASGCPRRPAKVYVKSCPEDKCLPEDRFPSQGSRDKEFEVSSADGSVFIADGRGSAGDGVFCVPSKH----GDCVYYIAVTAGGADEPAMQLTATADVPTGVSLVVPCIGDSSLPDGMIVNPANRVPLSGMKLYELCSKGEVDFQVSVESCRGEVELFVCDDTCPGLYPSKKPGERMVYTYMSDGKMVCTKHQ--QDT---QCHTPSGSDRNKEVSVTVEAGHPEEGTITTRSSTYFVGVGMRPGQRAEDQEHLLRVKVMGEEGVPVSPSLSAKFLPS--GSDASRAVVGGREATVEWGGATLHTPKLSGRHPHEAEDRDCGIYCSYEVYAVPTRLKGEFPHTACGLESLSNRLKMDVVYKFVGNAKNPGEVTQ 973          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7614.16536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQB6_9PHAE5.630e-21462.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7614contigL-elsbetiae_contig7614:538..9354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7614.16536.1mRNA_L-elsbetiae_contig7614.16536.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7614 538..9354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7614.16536.1 ID=prot_L-elsbetiae_contig7614.16536.1|Name=mRNA_L-elsbetiae_contig7614.16536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=562bp
MGDAPSCTAPGEDGGDAGGGEGGGVGGVVCSGWTWSCASGRRRDIPISSM
HPCEITHPSEPPSQAGDNDDGGGGGGAQAIPRMNVSENCVPSSFGIGMMF
ITVAAQGGLDTSFSVMASFVGKHIVLVSGVPQHAVTSPMIPCGSATQTSS
GPCSATYETSSVMQEAMFTFRADANSDAALTGFSLSLLPECPTPCGGEAP
CPSGCPDRPAKVYVKSCLEGLCQPGDRFPSMGNSDKEFEVSTARGSIFIA
DAPGSASEGVFCVDSLRLGHQGSCIFYIAVTAGGADDPPMELTAMADIPH
GVSLVVPCVGDDSLPDGVIVAPTHRLPRSGMKLYELCAKEGADFQVSVES
CRGEPELFVGETSTAQGDDWEYNSNGAMICTNLPPPQSTGKRRCVPPPGG
FPQKDVSLIVKATDLPGGAGARTYFVGVGMRRGQRAEDQEHLLRVNLVGE
GGVRTSPALMVKTLPSVPANVPSRAAVGGGEATVEWGGSLLYTPKLSGRH
AHESELRDCGFYCSFEVFAVPKRLRGDFRQTPCGLESLQNRYKTDVVYSF
VGTPKVAGEVTR
back to top