mRNA_L-elsbetiae_contig761.16530.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig761.16530.1
Unique NamemRNA_L-elsbetiae_contig761.16530.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: D7G1J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J2_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 1.350e-93
Identity = 155/165 (93.94%), Postives = 159/165 (96.36%), Query Frame = 1
Query:   22 AAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLKSGARRAGVQQEYSAEMLAAEINGVRQGVHGAD 516
            AAEKTAGEVSLQGRKG M+LHPMTVNFDKK LDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLL+SGARRAG QQ+YS+EMLAAEINGVRQG  G D
Sbjct: 1035 AAEKTAGEVSLQGRKGAMYLHPMTVNFDKKALDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLRSGARRAGAQQDYSSEMLAAEINGVRQGGGGVD 1199          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A6H5KUI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUI1_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.390e-53
Identity = 106/169 (62.72%), Postives = 108/169 (63.91%), Query Frame = 1
Query:  178 MTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQ-------------------------------------------------------SVSTLLKSGARRAGVQQEYSAEMLAAEINGVRQGVHGADG 519
            MTTVTPLMLALFGGSLQVHHERQAITVD WLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQ                                                       SVSTLL+SGARRAG QQ+YS EMLAAEINGVRQG  G DG
Sbjct:    1 MTTVTPLMLALFGGSLQVHHERQAITVDSWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQARRNTNTRVATCAEDKANESRQPISMPNYIFPRHDPNPHPSIPVCDDIGGFNLPRSVSTLLRSGARRAGAQQDYSTEMLAAEINGVRQGGGGVDG 169          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S1UTW0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTW0_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.200e-42
Identity = 76/138 (55.07%), Postives = 102/138 (73.91%), Query Frame = 1
Query:   13 GKGAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDV--SDNGRDLIQSVSTLLK 420
            G G  EK AGE + Q  KG  +LHP TV+F +++L+SRY  YH++VKT K Y+RD TTV+   L LFGGSL+V+H R  +T+D WL FR   +AATLVK+LR  MER+LL+KI +PQED+  S+ G+ LI++VSTLL+
Sbjct:  123 GAGRGEKEAGECAFQSAKGEAYLHPCTVSFSQRKLESRYCCYHDMVKTKKTYVRDCTTVSEFALLLFGGSLKVYHVRGIVTIDDWLKFRIGAKAATLVKHLRAQMERMLLKKILNPQEDITKSEEGKALIEAVSTLLE 260          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A835Z857_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z857_9STRA)

HSP 1 Score: 159 bits (402), Expect = 6.310e-42
Identity = 91/218 (41.74%), Postives = 120/218 (55.05%), Query Frame = 1
Query:   16 KGAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHE--------------------------------------------------VVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLKSG---ARRAGVQQEYSAEMLAAEINGVRQGVHG 510
            K  A K AGE+    RKG  +LHPM++NF++ +LDSRY VYHE                                                  +V+TSK+YIRD TTV+P  LALFGG+L +HHE Q ++VD WLHFRA RR   L+K LR  +E +LL KI HPQ+DV+  GRD+I +VS LL+     AR  G   EY+ ++LA E++G+R G  G
Sbjct: 1456 KAPAPKKAGELMFSSRKGTSYLHPMSINFNEVDLDSRYAVYHEASTCNNFVNCSRTVAKQNVCLTVALIMCPFTTIGAADAAITRRVSMPDKQMVRTSKIYIRDCTTVSPFALALFGGTLVLHHEHQVLSVDGWLHFRAPRRVGALIKALRQQVEGVLLHKIAHPQDDVTALGRDVIGAVSRLLRRAGEDARLRGGHLEYTQDILAVEVSGMRVGASG 1673          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S1ZRQ7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRQ7_TRICV)

HSP 1 Score: 149 bits (376), Expect = 1.170e-38
Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 1
Query:   19 GAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDV--SDNGRDLIQSVSTLLKSGARRAGVQQEYSAEML----AAEINGVRQGVHGADG 519
            G ++KT GE +   +KG ++LHP T++F++K+L SRY  YHE+VKTSKVY+RD TTV+   L LFGG+L+V H    + VD WL FR A + ATLVK+LR  ME +LL+KI  P +DV  S  G  LIQ+VS LL+   R   V    +AE++       ++G  +G H  +G
Sbjct:  513 GGSDKTVGECAFNSQKGDVYLHPCTISFNEKKLGSRYCCYHEIVKTSKVYVRDCTTVSEFALLLFGGNLKVFHTHGVVAVDDWLKFRIAAKPATLVKHLRAQMESMLLKKIVSPDDDVTASSEGMALIQAVSALLEKEVRE--VPDRSAAEIVKPWTGQSVDGGNRGGHSREG 683          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7R9YG42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG42_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.100e-38
Identity = 80/143 (55.94%), Postives = 98/143 (68.53%), Query Frame = 1
Query:   16 KGAAEKTAGEVSLQGRKGPMFLHPMTVNFDK--KELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRA-ARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLKSGARR 435
            K A  K  GEV+L+  KG M+LHP T+ F+     L SRY VYHE VKTSKVY+RD +   P  L LFGGSL VHHE Q IT+DKWLHFR    +AATLVK+LR  +E +LL+KIT P  +V+D G  LI++VS LL S + R
Sbjct:  580 KNAPSKKVGEVALESVKGAMYLHPSTIGFNSVVSTLKSRYLVYHERVKTSKVYLRDASPADPFTLLLFGGSLDVHHEEQVITLDKWLHFRVPGLKAATLVKHLREQLEEVLLQKITQPSAEVTDLGIQLIEAVSALLSSASAR 722          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S1BMK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMK3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.720e-36
Identity = 67/143 (46.85%), Postives = 91/143 (63.64%), Query Frame = 1
Query:   13 GKGAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSD--NGRDLIQSVSTLLKSGARR 435
            G  A  K AG+V     KGP+ LHP T++F KK L  RY  YHE+VKTSKVY+RD T V    + LFGG L++HH R  + VD WL FR   ++A +VK+LR  ME++L  KI  P  D+S   NG+ LIQ +S +L+  +++
Sbjct:   87 GPSAGSKRAGDVPFNSLKGPVHLHPSTISFTKKRLGGRYCCYHEIVKTSKVYVRDCTPVNEFAILLFGGGLKLHHRRGIVVVDDWLKFRIPPKSAAVVKHLRTQMEKMLFEKIVRPDTDISGSTNGKLLIQVISRVLEVESKK 229          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S3QBY0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBY0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.710e-36
Identity = 71/133 (53.38%), Postives = 96/133 (72.18%), Query Frame = 1
Query:   28 EKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDV--SDNGRDLIQSVSTLLK 420
            +K AG  + Q  KG +FLHP T++F +K+++SRY  YHE+VKTSK Y RD T V+   L LFGG+L+V+H +  IT+D+WL FR A + ATLVK+LR  ME LLLRKI  P+ED+  S  G+ LIQ++STL +
Sbjct: 1401 KKPAGTSAFQSLKGDVFLHPSTISFGEKKIESRYCCYHEIVKTSKTYARDATPVSKFALLLFGGNLKVYHAQGVITIDEWLKFRIAAKPATLVKHLRAQMENLLLRKIISPEEDIIESPEGKALIQAISTLFE 1533          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: B8C1N5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1N5_THAPS)

HSP 1 Score: 140 bits (353), Expect = 2.040e-35
Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 1
Query:   31 KTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDV--SDNGRDLIQSVSTLLK 420
            KTAGEV+ +G+ G ++LHP T+ F  KELDSRY  YHE++KTSKVY+RD  TV    L LFGG+L+V+       VD+WL FR   + ATLVKYLR  ME LLL KI +PQ DV  S  G+ +I +VS LLK
Sbjct:  654 KTAGEVAFRGQMGEVYLHPCTIAFTAKELDSRYCCYHEIMKTSKVYVRDCCTVPKFALLLFGGALKVYQSHGVAAVDEWLKFRVQAKPATLVKYLRTSMESLLLEKIMNPQVDVTGSSKGKAVIDAVSALLK 785          
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S3UUP8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUP8_HETAK)

HSP 1 Score: 138 bits (347), Expect = 8.500e-35
Identity = 64/129 (49.61%), Postives = 91/129 (70.54%), Query Frame = 1
Query:   31 KTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLL 417
            K  GE +L   +G ++ HP + +F+   L +RY +YHE+VKTSKVYIRD TTV+P  L LFGG L VHH+++ +TVD WLHFRAAR+ A L+++LR+  E +LL +I +P  +VS  GR+L+  +  LL
Sbjct:  368 KKVGEHALMSTRGAVYFHPCSASFEADGLSTRYIIYHEMVKTSKVYIRDGTTVSPFTLVLFGGELTVHHQQEVVTVDGWLHFRAARKTAALLRHLRLQTEAILLEQIANPDGEVSGKGRNLVMVLDALL 496          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1J2_ECTSI1.350e-9393.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUI1_9PHAE1.390e-5362.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UTW0_9STRA1.200e-4255.07Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A835Z857_9STRA6.310e-4241.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1ZRQ7_TRICV1.170e-3846.24Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7R9YG42_9STRA2.100e-3855.94Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1BMK3_9STRA2.720e-3646.85Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S3QBY0_9STRA3.710e-3653.38Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8C1N5_THAPS2.040e-3555.30Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3UUP8_HETAK8.500e-3549.61Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig761contigL-elsbetiae_contig761:6249..10696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score307.4
Seed ortholog evalue4.3e-81
Seed eggNOG ortholog2880.D7G1J2
KEGG koko:K13026
Hectar predicted targeting categoryother localisation
EggNOG free text desc.helicase activity
EggNOG OGsCOG1643@1,KOG0920@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons5
Model size526
Cds size522
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig761.16530.1prot_L-elsbetiae_contig761.16530.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig761 6251..10696 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816845.667948-CDS-L-elsbetiae_contig761:6250..63731622816845.667948-CDS-L-elsbetiae_contig761:6250..6373Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 6251..6373 -
1691683857.1620412-CDS-L-elsbetiae_contig761:6250..63731691683857.1620412-CDS-L-elsbetiae_contig761:6250..6373Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 6251..6373 -
1622816845.6803987-CDS-L-elsbetiae_contig761:7494..76471622816845.6803987-CDS-L-elsbetiae_contig761:7494..7647Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 7495..7647 -
1691683857.1785543-CDS-L-elsbetiae_contig761:7494..76471691683857.1785543-CDS-L-elsbetiae_contig761:7494..7647Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 7495..7647 -
1622816845.6942728-CDS-L-elsbetiae_contig761:7958..80421622816845.6942728-CDS-L-elsbetiae_contig761:7958..8042Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 7959..8042 -
1691683857.1902533-CDS-L-elsbetiae_contig761:7958..80421691683857.1902533-CDS-L-elsbetiae_contig761:7958..8042Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 7959..8042 -
1622816845.7039752-CDS-L-elsbetiae_contig761:9655..97721622816845.7039752-CDS-L-elsbetiae_contig761:9655..9772Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 9656..9772 -
1691683857.2033484-CDS-L-elsbetiae_contig761:9655..97721691683857.2033484-CDS-L-elsbetiae_contig761:9655..9772Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 9656..9772 -
1622816845.7161882-CDS-L-elsbetiae_contig761:10651..106961622816845.7161882-CDS-L-elsbetiae_contig761:10651..10696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 10652..10696 -
1691683857.222705-CDS-L-elsbetiae_contig761:10651..106961691683857.222705-CDS-L-elsbetiae_contig761:10651..10696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig761 10652..10696 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig761.16530.1

>prot_L-elsbetiae_contig761.16530.1 ID=prot_L-elsbetiae_contig761.16530.1|Name=mRNA_L-elsbetiae_contig761.16530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp
SKGGGKGAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVV
KTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAAT
LVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLKSGARRAGVQQ
EYSAEMLAAEINGVRQGVHGADGW
back to top

mRNA from alignment at L-elsbetiae_contig761:6249..10696-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig761.16530.1 ID=mRNA_L-elsbetiae_contig761.16530.1|Name=mRNA_L-elsbetiae_contig761.16530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4448bp|location=Sequence derived from alignment at L-elsbetiae_contig761:6249..10696- (Laminarionema elsbetiae ELsaHSoW15)
TCAAAGGGCGGCGGCAAGGGGGCGGCAGAGAAGACCGCGGGAGAGGTGAG CGATTCGTCGATGGATTCGCTGTTTGCAGGCTACATAAGGTGTCGAGTGC TCGCGAGGTCTGGGAACAAAACTTGACCCCTTTTATGTCTGTCCTGAGGG AGGGAGGTGGCCGGCGGCGTATCGATGCATCCGACGACGTTCGGCCGCCG AGTTAGTCGTCCCCACAACGAGCAAAGCCGCGGGCAATGTGATAAAATGA TGATGCGCCAACGACCAGCGACCCCCCTTATCTATAGGCCTCCCGATAAA ACCTTCTCCGAAAGCCAGCCGGGCTTTGTGCGGGGATGCGGGGTGAACGA CCTATCGACCACCATCATGCGGTAGGTACCAATACCCCCTCCCCCCCCCC CCCCCGCGCCCCCCCCCCCCCTTCTGCTCCCTGCGCCCCGGGTGGTCACT TGGTGGCCGACGACGACCCTAGAACCACAACAGCTTTGTGTTTGCTCCAT CGACTACTCCATCCTGTCCAACCCTGTTCGTCTCGTCCCATAGGCGGGGA AGGATCCAAGTACCAACGCCTGTATCCACCGGGAAGTATCTACTGCTGTT GTGCTTTCATACTCTGGCAGGGACGTACGTGCCGCTCTGTCACCGCTTTC TGATCTCTCCTATGGAAACTAGAGTTCGTACTACCCAAAAATTGAGTGGT ACTCCAGCATGTATGTACCTTAACTCACTCCGCGCCCGCTCTGGCCCGCC CCCTCTCCCGGGGCTGCCGGCGATGCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCGGGGGGGCCGGGGGGCCCCCCCCCCCCCCCCCC CCCGCGCCGCTCACCGACGAACGTCTGAAACCGACCCCGTAACCGACAAA AAAAACGAAAACAAAACAAAACAGGTGTCCCTGCAGGGCAGGAAGGGACC CATGTTCCTGCACCCGATGACCGTGAACTTCGACAAGAAGGAGCTCGACA GCCGGTACGGGGTCTACCACGAGGTGGTCAAGACTTCGAAGGTGAGGGAG GAGGGAATAAATCTCGCCTCCTCCGCTGTTTGTTCTTCTTGGCAGCGGGT GTTGTGTGCTATTTAAGTTTGTAGTCTTACGTATTATGCGCTAAGTACAT ACTTCTTCTGTCCCATAAGTCTGTATCGGTACGTTTGTACGACCCCATAA CCGTGTCCGATTTGTCTTTTGATATTTTGACTGCATTCCCCGCCGTTTTT TGAGTCAAGAGCAATGTTTTTTTTTTTCCAAGCTGATGGTTCACCCATGC GGCTGACCGGCCGCCAAAACATGAGTCGGCCCAAAAATGGCTGTATTTTG CCGTTTCTGCGAGAAAATCATGGAGACCGAGAACACGAAAAATCCGCGAA AATTGGAGAAAACCCGCACAAATCGCAAAATAACCTTTGATTTTGGATAT CTCGTTGAAGCGATCCGACGCACACGCTTGGTGTAAAAATTTCATACTGA AATTACAACGATTTGACGTCAAAACATCCAAAATCGGCCAAAAATGGATC TGCATGGATGAGAAAGTGCCAAAATGGGGTATATGTTGACATAATTTTAG CATTCAACACCAAGTCCTTTTTTTTTCTTTCTCCACTGGCTTCGTCTGTG CTTACATCTTTCCAATGAACCCAACTACAAGACAGTCGTCAATACCTTTA CATCCAAACGATCAAACGCCCATAACGATACAGACTTATGGGACAGAGGA AGTATACGGCCAACACCAGCTCTCGTTTTGTAGCTGTGCTTGCCTCGCAT CTTGCGTGCAAGTTTGTCGATGGGCACAGGGTAGGGGGTGCCAGCACTCA CTCTTGCGGGGGTATGTACAAAGTTAACGCATCGTGGGGCCTCCTCTTTG TATTGGTTTTACGTGTGGCATGCTCTAAATATCTCGCGAACAAGCGGTAC GCCGGCGCAGAGCACGAATGCGCACATTTTGGGCCGGATGAAACGTTGCT TTTTTTTATTCGCCGCCCGCCCACCACTCGGTTTGCTGGGATTCTTCGAA GTACGGCACTAAAGATCTACGCAGGACTAAGTTCGGAAGAGACGAAACAG TCGTCTACGTACATACGTGTGACCCCGGTCGGCTCCTCTAGCCAGTCGTA GTGGAGGAAGGGGGCCAGTGGGGCAGACGGCGAATACGCGAATAATGGGA AGAAAAACAATATAACCGCGAACCCCTGTGGAAGGTATGTACATGGGAGA AACAAGCTATTTATGTACCTACTGGGTGGCGATGCCGATAAAATCGGGAT TTACGTAGTGCTCGTTTGATGTTTGCTGGTTCGGCACTTTGCGGTGAGCG CTGAGAAGTGGAGGCGTCGATGCCTGTGTTTGTGCGCTGTGGGTTTGGTC GTGGTTTGGAACCTTGAGTTACGTTAGCTATTCCTTTGAAGTGGCTGTCA GCGGAAGCCCATTGATTTTCACTCGTTGGATGCATACACACACCCTGCGC ACGTTGAAATATCGACCAGGAGGGGTCCCGTAGCCGGAAAGCCGGGGCGT ATGGAAACGTGTACGAAAAACTGTGTGAAATACTGCGGACGAAGGCCTTG CTAACTTGCGGTTGCCGTGCTCTCGTGTCTCGTGTCCCGTGTCCCGTGTC TCAGGTTTACATCCGCGACATGACCACCGTGACACCTCTCATGCTTGCCC TCTTCGGGGGTTCCCTGCAAGTGCACCACGAGAGACAGGTGAGCACACAC CCTGGAGTGGCGCCAACACGCCTCCTTAAAAAGCGAAACCCTGTCGAAAC GTGCGTCTCGCCGACTGCTACAGACAGCCGTGCAGTTGCAACGTGTGCAA CACGCACAGCCTCAGGCACGTTGAACAGACACGCTGCCGTTTGACTCGCT GCAGCTATCCCAAGTTTTGGGGGTATGTAGATAAAACCCAGAACGGACGC CGTTCGATAAAACCCACAACGGGCGCGCCGTTCCTACACTTGCCCACCCT GCTCTGCACTCTGTACTCTGACTCTTTGCATCCATCCCATGGCGGCCAGG CAATCACGGTGGACAAGTGGCTCCACTTCCGCGCCGCGCGCAGGGCGGCT ACGCTGGTGAAGTATCTTCGGGTGCACATGGAGAGGCTGCTGCTCCGGAA GATCACGCACCCGCAGGAGGACGTGTCGGACAACGGTAGAGACCTCATTC AGGTATGCAAAAGTTCGCAGCAGTCGCATGTAAAAACGCCCCAAAACACA GCAGTACATACTGGAGTAGTCGGGTGGAGAATTTATATTACCTACATATG TTGATACCGTTACGGGAGCTGTGGTCGTTACTGTGGTCGTTATGAGCAGC CCGGCTGTTTGAGTTTTCTGTCCCCCTCGTTGAAAACGCTTCCATGTCGG GCAGAACAGCATGCAGGTATCGGACGATTGGTCTGCTCTCTTGCTTCACC CTCTGGAATGTGTATCCCTTGAGCAACGTCTGAAAAAGGGAGACTTGTGC TCCGTACAACTACATACTTGGGGGGGACGTACCTTGCGTGTATGTGGCGT AACTCACGTTTGTTCTTCTTTTGCTGTTCATGATAAAAGAAGCTGAATAA ATAGCCCTTGGACTTTTCGAGAGTTTCGTTATCGTGGTGGTCGCGGCCGG GGTGGGCGTCGGTAGGCTGGAGCCATCGCGCGGTTCATGCCTGAAACAAT CACGGTCGTCGCGACAAGCCAAGCAGGCCGGCCAGGTGTTCGTTACCGTA GGTGACGGCAAGATACCACACCCCCTGGACATATTTCCAAAGCTCGATTC TTCCCCAGCAAGAGGGGTGCCAGTGCTTAAACGGGGTGGCGTTGTAAATA CCTACTCGAGGGCTGTCCGTAAATGTGCCGTTTGGTGCTGGCAGGCACCC TCTTCGCCACGGGGTAATGGAGCTCTGAAATTCGGTCCAGGGGGTGTGAT ATCTTGTGTCACCTGCGGTACATGCACGTGTCCGACGAATTGGTTCTCCC TGCATCACCTTTTTGTTTCAAACCCACCGCCACCAGCCACCAATCAGCGC CTGATTTACCCCTTTTCTCTCTCTTCCCATGTAGCGTTCCACAATGCCGC CGCCAGCTTCCCCACCGCACATCAAAATGCGTCTCTCTTTGGTCGCGAAG TACGCTCATCGCACATGCTATGTACTACGAGTATTTGTTATACTTCCCTT CGTCCTCGCCGCCCATGGCACCCCCTCCCTCCGCCCGAGGAAATTTTTCG TCCTTATCCTGTCTGCCGTCCCCCGTTGTCCGCCGGTTTCTGGCCCGCCT GCTGCCGACGTAAATGAAATCAGTCCGTCTCCACCCTGCTCAAGTCGGGG GCGAGGAGGGCAGGCGTGCAGCAGGAGTACAGCGCCGAGATGCTGGCGGC CGAGATCAACGGTGTGCGACAGGGGGTACACGGAGCGGACGGCTGGGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig761:6249..10696-

>mRNA_L-elsbetiae_contig761.16530.1 ID=mRNA_L-elsbetiae_contig761.16530.1|Name=mRNA_L-elsbetiae_contig761.16530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1044bp|location=Sequence derived from alignment at L-elsbetiae_contig761:6249..10696- (Laminarionema elsbetiae ELsaHSoW15)
TCAAAGGGCGGCGGCAAGGGGGCGGCAGAGAAGACCGCGGGAGAGTCAAA
GGGCGGCGGCAAGGGGGCGGCAGAGAAGACCGCGGGAGAGGTGTCCCTGC
AGGGCAGGAAGGGACCCATGTTCCTGCACCCGATGACCGTGAACTTCGAC
AAGAAGGAGCTCGACAGCCGGTACGGGGTCTACCACGAGGTGGTCAAGAC
TTCGAAGGTGTCCCTGCAGGGCAGGAAGGGACCCATGTTCCTGCACCCGA
TGACCGTGAACTTCGACAAGAAGGAGCTCGACAGCCGGTACGGGGTCTAC
CACGAGGTGGTCAAGACTTCGAAGGTTTACATCCGCGACATGACCACCGT
GACACCTCTCATGCTTGCCCTCTTCGGGGGTTCCCTGCAAGTGCACCACG
AGAGACAGGTTTACATCCGCGACATGACCACCGTGACACCTCTCATGCTT
GCCCTCTTCGGGGGTTCCCTGCAAGTGCACCACGAGAGACAGGCAATCAC
GGTGGACAAGTGGCTCCACTTCCGCGCCGCGCGCAGGGCGGCTACGCTGG
TGAAGTATCTTCGGGTGCACATGGAGAGGCTGCTGCTCCGGAAGATCACG
CACCCGCAGGAGGACGTGTCGGACAACGGTAGAGACCTCATTCAGGCAAT
CACGGTGGACAAGTGGCTCCACTTCCGCGCCGCGCGCAGGGCGGCTACGC
TGGTGAAGTATCTTCGGGTGCACATGGAGAGGCTGCTGCTCCGGAAGATC
ACGCACCCGCAGGAGGACGTGTCGGACAACGGTAGAGACCTCATTCAGTC
CGTCTCCACCCTGCTCAAGTCGGGGGCGAGGAGGGCAGGCGTGCAGCAGG
AGTACAGCGCCGAGATGCTGGCGGCCGAGATCAACGGTGTGCGACAGGGG
GTACACGGAGCGGACGGCTGGTCCGTCTCCACCCTGCTCAAGTCGGGGGC
GAGGAGGGCAGGCGTGCAGCAGGAGTACAGCGCCGAGATGCTGGCGGCCG
AGATCAACGGTGTGCGACAGGGGGTACACGGAGCGGACGGCTGG
back to top